RNA–Protein interactions for RNA: ENST00000545718.2

SCAP-215, Transcript of SREBF chaperone, humanhuman

TSL 5 BASIC

Gene SCAP, Length 2,950 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-215ENST00000545718 USP42Q9H9J4 1324 aaKnown RBP18.76■□□□□ 0.59
SCAP-215ENST00000545718 EPB41L2O43491 1005 aaKnown RBP18.76■□□□□ 0.59
SCAP-215ENST00000545718 SYT1P21579 422 aa18.76■□□□□ 0.59
SCAP-215ENST00000545718 VPS37CA5D8V6 355 aaPredicted RBP18.75■□□□□ 0.59
SCAP-215ENST00000545718 STX6O43752 255 aa18.75■□□□□ 0.59
SCAP-215ENST00000545718 MSNP26038 577 aaKnown RBP18.75■□□□□ 0.59
SCAP-215ENST00000545718 PPP1R9BQ96SB3 815 aa18.75■□□□□ 0.59
SCAP-215ENST00000545718 CCDC171Q6TFL3 1326 aa18.75■□□□□ 0.59
SCAP-215ENST00000545718 N4BP2Q86UW6 1770 aaPredicted RBP18.75■□□□□ 0.59
SCAP-215ENST00000545718 A0A0D9SFI3 127 aa18.74■□□□□ 0.59
SCAP-215ENST00000545718 ZSCAN22P10073 491 aaPredicted RBP18.74■□□□□ 0.59
SCAP-215ENST00000545718 GJB2P29033 226 aa18.74■□□□□ 0.59
SCAP-215ENST00000545718 CABP4P57796 275 aa18.74■□□□□ 0.59
SCAP-215ENST00000545718 SYAP1Q96A49 352 aaPredicted RBP18.74■□□□□ 0.59
SCAP-215ENST00000545718 METTL22Q9BUU2 404 aaPredicted RBP18.74■□□□□ 0.59
SCAP-215ENST00000545718 RPAP1Q9BWH6 1393 aaPredicted RBP18.73■□□□□ 0.59
SCAP-215ENST00000545718 CYP27B1O15528 508 aa18.73■□□□□ 0.59
SCAP-215ENST00000545718 SNRPA1P09661 255 aaKnown RBP18.73■□□□□ 0.59
SCAP-215ENST00000545718 CREB3L3Q68CJ9 461 aa18.73■□□□□ 0.59
SCAP-215ENST00000545718 SLIT3O75094 1523 aa18.73■□□□□ 0.59
SCAP-215ENST00000545718 COL9A3Q14050 684 aaPredicted RBP18.73■□□□□ 0.59
SCAP-215ENST00000545718 DNAJC2Q99543 621 aaKnown RBP18.73■□□□□ 0.59
SCAP-215ENST00000545718 KDM6AO15550 1401 aaPredicted RBP18.73■□□□□ 0.59
SCAP-215ENST00000545718 IL17RAQ96F46 866 aa18.72■□□□□ 0.59
SCAP-215ENST00000545718 RGPD5Q99666 1765 aa18.72■□□□□ 0.59
SCAP-215ENST00000545718 A0A087WZG4 1122 aa18.72■□□□□ 0.59
SCAP-215ENST00000545718 ZSCAN30Q86W11 494 aa18.72■□□□□ 0.59
SCAP-215ENST00000545718 FMNL2Q96PY5 1086 aa18.72■□□□□ 0.59
SCAP-215ENST00000545718 TFCP2Q12800 502 aa18.71■□□□□ 0.59
SCAP-215ENST00000545718 TSPY26PQ9H489 355 aa18.71■□□□□ 0.59
SCAP-215ENST00000545718 TMEM94Q12767 1356 aa18.71■□□□□ 0.59
SCAP-215ENST00000545718 STK3Q13188 491 aa18.71■□□□□ 0.59
SCAP-215ENST00000545718 NECTIN1Q15223 517 aa18.71■□□□□ 0.59
SCAP-215ENST00000545718 MEGF6O75095 1541 aa18.7■□□□□ 0.58
SCAP-215ENST00000545718 ME3Q16798 604 aa18.7■□□□□ 0.58
SCAP-215ENST00000545718 VPS53Q5VIR6 699 aa18.7■□□□□ 0.58
SCAP-215ENST00000545718 MPNDQ8N594 471 aa18.7■□□□□ 0.58
SCAP-215ENST00000545718 HIP1O00291 1037 aa18.7■□□□□ 0.58
SCAP-215ENST00000545718 F13A1P00488 732 aa18.7■□□□□ 0.58
SCAP-215ENST00000545718 CHGBP05060 677 aa18.7■□□□□ 0.58
SCAP-215ENST00000545718 ZNF589Q86UQ0 364 aaPredicted RBP18.7■□□□□ 0.58
SCAP-215ENST00000545718 FERMT3Q86UX7 667 aa18.7■□□□□ 0.58
SCAP-215ENST00000545718 DCAF5Q96JK2 942 aa18.7■□□□□ 0.58
SCAP-215ENST00000545718 ZSWIM6Q9HCJ5 1215 aa18.7■□□□□ 0.58
SCAP-215ENST00000545718 ZNF330Q9Y3S2 320 aaPredicted RBP18.7■□□□□ 0.58
SCAP-215ENST00000545718 TAF6LQ9Y6J9 622 aa18.7■□□□□ 0.58
SCAP-215ENST00000545718 OVOS2A0A0G2JMS6 1433 aa18.7■□□□□ 0.58
SCAP-215ENST00000545718 SLC27A2O14975 620 aa18.69■□□□□ 0.58
SCAP-215ENST00000545718 UTYO14607 1347 aa18.69■□□□□ 0.58
SCAP-215ENST00000545718 DNM1Q05193 864 aaKnown RBP18.69■□□□□ 0.58
SCAP-215ENST00000545718 TCHHQ07283 1943 aa18.69■□□□□ 0.58
SCAP-215ENST00000545718 PTMAP06454 111 aaKnown RBP18.69■□□□□ 0.58
SCAP-215ENST00000545718 BLOC1S2Q6QNY1 142 aa18.69■□□□□ 0.58
SCAP-215ENST00000545718 TPCN1Q9ULQ1 816 aa18.69■□□□□ 0.58
SCAP-215ENST00000545718 MAP4K1Q92918 833 aa18.68■□□□□ 0.58
SCAP-215ENST00000545718 DBNLQ9UJU6 430 aaKnown RBP18.68■□□□□ 0.58
SCAP-215ENST00000545718 RNF20Q5VTR2 975 aa18.68■□□□□ 0.58
SCAP-215ENST00000545718 NEUROD6Q96NK8 337 aa18.68■□□□□ 0.58
SCAP-215ENST00000545718 PHF14O94880 888 aa18.67■□□□□ 0.58
SCAP-215ENST00000545718 ATP6V1DQ9Y5K8 247 aa18.67■□□□□ 0.58
SCAP-215ENST00000545718 PHRF1Q9P1Y6 1649 aaKnown RBP18.67■□□□□ 0.58
SCAP-215ENST00000545718 PLCB2Q00722 1185 aa18.67■□□□□ 0.58
SCAP-215ENST00000545718 LMBR1LQ6UX01 489 aa18.67■□□□□ 0.58
SCAP-215ENST00000545718 CCDC129Q6ZRS4 1044 aa18.67■□□□□ 0.58
SCAP-215ENST00000545718 DDX46Q7L014 1031 aaKnown RBP18.67■□□□□ 0.58
SCAP-215ENST00000545718 ZSCAN31Q96LW9 406 aaPredicted RBP18.67■□□□□ 0.58
SCAP-215ENST00000545718 DBNDD2Q9BQY9 259 aa18.67■□□□□ 0.58
SCAP-215ENST00000545718 ZNF142P52746 1687 aaPredicted RBP18.67■□□□□ 0.58
SCAP-215ENST00000545718 PSMA5P28066 241 aa18.66■□□□□ 0.58
SCAP-215ENST00000545718 PTPN12Q05209 780 aaKnown RBP18.66■□□□□ 0.58
SCAP-215ENST00000545718 LARP1BQ659C4 914 aaKnown RBP18.66■□□□□ 0.58
SCAP-215ENST00000545718 SH2B1Q9NRF2 756 aaPredicted RBP18.66■□□□□ 0.58
SCAP-215ENST00000545718 TNNI3KQ59H18 835 aa18.66■□□□□ 0.58
SCAP-215ENST00000545718 FAM173BQ6P4H8 233 aa18.66■□□□□ 0.58
SCAP-215ENST00000545718 FPGT-TNNI3KV9GXZ4 949 aa18.66■□□□□ 0.58
SCAP-215ENST00000545718 TOM1L2Q6ZVM7 507 aa18.66■□□□□ 0.58
SCAP-215ENST00000545718 SEC62Q99442 399 aaKnown RBP18.66■□□□□ 0.58
SCAP-215ENST00000545718 TM6SF1Q9BZW5 370 aa18.66■□□□□ 0.58
SCAP-215ENST00000545718 MTMR6Q9Y217 621 aa18.65■□□□□ 0.58
SCAP-215ENST00000545718 ZBTB3Q9H5J0 574 aa18.65■□□□□ 0.58
SCAP-215ENST00000545718 PRDM11Q9NQV5 511 aa18.65■□□□□ 0.58
SCAP-215ENST00000545718 ST3GAL1Q11201 340 aa18.64■□□□□ 0.57
SCAP-215ENST00000545718 COPRSQ9NQ92 184 aa18.64■□□□□ 0.57
SCAP-215ENST00000545718 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.64■□□□□ 0.57
SCAP-215ENST00000545718 UBE2HP62256 183 aa18.63■□□□□ 0.57
SCAP-215ENST00000545718 FGD1P98174 961 aa18.63■□□□□ 0.57
SCAP-215ENST00000545718 TTLL7Q6ZT98 887 aa18.63■□□□□ 0.57
SCAP-215ENST00000545718 A1BGP04217 495 aa18.63■□□□□ 0.57
SCAP-215ENST00000545718 CCDC183Q5T5S1 534 aa18.63■□□□□ 0.57
SCAP-215ENST00000545718 TRPM3Q9HCF6 1732 aaPredicted RBP18.63■□□□□ 0.57
SCAP-215ENST00000545718 SLFNL1Q499Z3 407 aa18.63■□□□□ 0.57
SCAP-215ENST00000545718 CADPS2Q86UW7 1296 aa18.63■□□□□ 0.57
SCAP-215ENST00000545718 PDLIM2Q96JY6 352 aa18.63■□□□□ 0.57
SCAP-215ENST00000545718 HCLS1P14317 486 aaPredicted RBP18.62■□□□□ 0.57
SCAP-215ENST00000545718 HSP90B1P14625 803 aaKnown RBP18.62■□□□□ 0.57
SCAP-215ENST00000545718 GIMAP6Q6P9H5 292 aa18.62■□□□□ 0.57
SCAP-215ENST00000545718 LRP10Q7Z4F1 713 aa18.62■□□□□ 0.57
SCAP-215ENST00000545718 LRRC2Q9BYS8 371 aa18.62■□□□□ 0.57
SCAP-215ENST00000545718 RFX5P48382 616 aaPredicted RBP18.62■□□□□ 0.57
SCAP-215ENST00000545718 STRN4Q9NRL3 753 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms