RNA–Protein interactions for RNA: ENST00000545549.1

LINC01965-204, Transcript of long intergenic non-protein coding RNA 1965, humanhuman

TSL 4 BASIC

Gene LINC01965, Length 575 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01965-204ENST00000545549 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.82□□□□□ -1.64
LINC01965-204ENST00000545549 FYB1O15117 783 aa4.82□□□□□ -1.64
LINC01965-204ENST00000545549 PER1O15534 1290 aaPredicted RBP4.82□□□□□ -1.64
LINC01965-204ENST00000545549 RNF40O75150 1001 aa4.82□□□□□ -1.64
LINC01965-204ENST00000545549 HSPA5P11021 654 aaKnown RBP4.82□□□□□ -1.64
LINC01965-204ENST00000545549 PTPN5P54829 565 aa4.82□□□□□ -1.64
LINC01965-204ENST00000545549 DEFB115Q30KQ5 88 aa4.82□□□□□ -1.64
LINC01965-204ENST00000545549 NLRP13Q86W25 1043 aa4.82□□□□□ -1.64
LINC01965-204ENST00000545549 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.82□□□□□ -1.64
LINC01965-204ENST00000545549 AK7Q96M32 723 aa4.82□□□□□ -1.64
LINC01965-204ENST00000545549 REPIN1Q9BWE0 567 aaKnown RBP4.82□□□□□ -1.64
LINC01965-204ENST00000545549 TMEM134Q9H6X4 195 aa4.82□□□□□ -1.64
LINC01965-204ENST00000545549 PRDM11Q9NQV5 511 aa4.82□□□□□ -1.64
LINC01965-204ENST00000545549 PLSCR2Q9NRY7 297 aa4.82□□□□□ -1.64
LINC01965-204ENST00000545549 PASKQ96RG2 1323 aa4.81□□□□□ -1.64
LINC01965-204ENST00000545549 ZC3H4Q9UPT8 1303 aaKnown RBP4.81□□□□□ -1.64
LINC01965-204ENST00000545549 SOWAHBA6NEL2 793 aa4.81□□□□□ -1.64
LINC01965-204ENST00000545549 ERICH6BQ5W0A0 696 aa4.81□□□□□ -1.64
LINC01965-204ENST00000545549 THSD4Q6ZMP0 1018 aa4.81□□□□□ -1.64
LINC01965-204ENST00000545549 NME9Q86XW9 330 aa4.81□□□□□ -1.64
LINC01965-204ENST00000545549 ABTB2Q8N961 1025 aa4.81□□□□□ -1.64
LINC01965-204ENST00000545549 LRCH3Q96II8 777 aa4.81□□□□□ -1.64
LINC01965-204ENST00000545549 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.81□□□□□ -1.64
LINC01965-204ENST00000545549 TFCP2L1Q9NZI6 479 aa4.81□□□□□ -1.64
LINC01965-204ENST00000545549 RNF181Q9P0P0 153 aa4.81□□□□□ -1.64
LINC01965-204ENST00000545549 ANKRD26Q9UPS8 1709 aa4.8□□□□□ -1.64
LINC01965-204ENST00000545549 KIF24Q5T7B8 1368 aa4.8□□□□□ -1.64
LINC01965-204ENST00000545549 TMF1P82094 1093 aa4.8□□□□□ -1.64
LINC01965-204ENST00000545549 HNRNPUQ00839 825 aaKnown RBP eCLIP4.8□□□□□ -1.64
LINC01965-204ENST00000545549 TTLL12Q14166 644 aaPredicted RBP4.8□□□□□ -1.64
LINC01965-204ENST00000545549 TERF2IPQ9NYB0 399 aa4.8□□□□□ -1.64
LINC01965-204ENST00000545549 HPS5Q9UPZ3 1129 aa4.8□□□□□ -1.64
LINC01965-204ENST00000545549 SPTBN5Q9NRC6 3674 aaKnown RBP4.8□□□□□ -1.64
LINC01965-204ENST00000545549 SMG6Q86US8 1419 aaKnown RBP4.8□□□□□ -1.64
LINC01965-204ENST00000545549 NPC1L1Q9UHC9 1359 aa4.79□□□□□ -1.64
LINC01965-204ENST00000545549 WDR17Q8IZU2 1322 aa4.79□□□□□ -1.64
LINC01965-204ENST00000545549 DDX11L8A8MPP1 907 aa4.79□□□□□ -1.64
LINC01965-204ENST00000545549 SLC10A3P09131 477 aa4.79□□□□□ -1.64
LINC01965-204ENST00000545549 PDE4DQ08499 809 aa4.79□□□□□ -1.64
LINC01965-204ENST00000545549 CHRNA2Q15822 529 aa4.79□□□□□ -1.64
LINC01965-204ENST00000545549 AMHR2Q16671 573 aa4.79□□□□□ -1.64
LINC01965-204ENST00000545549 CDCA8Q53HL2 280 aa4.79□□□□□ -1.64
LINC01965-204ENST00000545549 MSL1Q68DK7 614 aa4.79□□□□□ -1.64
LINC01965-204ENST00000545549 LARP1Q6PKG0 1096 aaKnown RBP4.79□□□□□ -1.64
LINC01965-204ENST00000545549 PARP9Q8IXQ6 854 aa4.79□□□□□ -1.64
LINC01965-204ENST00000545549 KCNH5Q8NCM2 988 aa4.79□□□□□ -1.64
LINC01965-204ENST00000545549 LRRC4BQ9NT99 713 aa4.79□□□□□ -1.64
LINC01965-204ENST00000545549 DAXXQ9UER7 740 aaPredicted RBP4.79□□□□□ -1.64
LINC01965-204ENST00000545549 BCS1LQ9Y276 419 aa4.79□□□□□ -1.64
LINC01965-204ENST00000545549 FAM208AQ9UK61 1670 aaKnown RBP4.79□□□□□ -1.64
LINC01965-204ENST00000545549 CRB1P82279 1406 aa4.79□□□□□ -1.64
LINC01965-204ENST00000545549 LRRC37A3O60309 1634 aa4.79□□□□□ -1.64
LINC01965-204ENST00000545549 INSRP06213 1382 aa4.78□□□□□ -1.64
LINC01965-204ENST00000545549 RGPD5Q99666 1765 aa4.78□□□□□ -1.64
LINC01965-204ENST00000545549 KIF7Q2M1P5 1343 aa4.78□□□□□ -1.64
LINC01965-204ENST00000545549 MAP3K19Q56UN5 1328 aa4.78□□□□□ -1.64
LINC01965-204ENST00000545549 WASHC2AQ641Q2 1341 aa4.78□□□□□ -1.64
LINC01965-204ENST00000545549 UNC80Q8N2C7 3258 aa4.78□□□□□ -1.64
LINC01965-204ENST00000545549 GLTPD2A6NH11 291 aa4.78□□□□□ -1.64
LINC01965-204ENST00000545549 ECE1P42892 770 aa4.78□□□□□ -1.64
LINC01965-204ENST00000545549 PPP4CP60510 307 aa4.78□□□□□ -1.64
LINC01965-204ENST00000545549 ZC3H6P61129 1189 aaKnown RBP4.78□□□□□ -1.64
LINC01965-204ENST00000545549 DDB1Q16531 1140 aa4.78□□□□□ -1.64
LINC01965-204ENST00000545549 NUTM2GQ5VZR2 741 aa4.78□□□□□ -1.64
LINC01965-204ENST00000545549 ERICH6Q7L0X2 663 aa4.78□□□□□ -1.64
LINC01965-204ENST00000545549 CCDC24Q8N4L8 307 aa4.78□□□□□ -1.64
LINC01965-204ENST00000545549 IP6K1Q92551 441 aa4.78□□□□□ -1.64
LINC01965-204ENST00000545549 TMUB1Q9BVT8 246 aa4.78□□□□□ -1.64
LINC01965-204ENST00000545549 CARD10Q9BWT7 1032 aa4.78□□□□□ -1.64
LINC01965-204ENST00000545549 GPCPD1Q9NPB8 672 aa4.78□□□□□ -1.64
LINC01965-204ENST00000545549 RTL1A6NKG5 1358 aa4.78□□□□□ -1.64
LINC01965-204ENST00000545549 CCDC7Q96M83 1385 aa4.78□□□□□ -1.64
LINC01965-204ENST00000545549 FBLN1P23142 703 aa4.77□□□□□ -1.65
LINC01965-204ENST00000545549 CLCN1P35523 988 aa4.77□□□□□ -1.65
LINC01965-204ENST00000545549 EVA1CP58658 441 aa4.77□□□□□ -1.65
LINC01965-204ENST00000545549 MAP3K12Q12852 859 aa4.77□□□□□ -1.65
LINC01965-204ENST00000545549 GIGYF2Q6Y7W6 1299 aaKnown RBP4.77□□□□□ -1.65
LINC01965-204ENST00000545549 HDGFL2Q7Z4V5 671 aaPredicted RBP4.77□□□□□ -1.65
LINC01965-204ENST00000545549 SLF2Q8IX21 1173 aa4.77□□□□□ -1.65
LINC01965-204ENST00000545549 RDH13Q8NBN7 331 aa4.77□□□□□ -1.65
LINC01965-204ENST00000545549 GPR101Q96P66 508 aaPredicted RBP4.77□□□□□ -1.65
LINC01965-204ENST00000545549 P2RX7Q99572 595 aaKnown RBP4.77□□□□□ -1.65
LINC01965-204ENST00000545549 POLR3GLQ9BT43 218 aa4.77□□□□□ -1.65
LINC01965-204ENST00000545549 MRS2Q9HD23 443 aa4.77□□□□□ -1.65
LINC01965-204ENST00000545549 TSR3Q9UJK0 312 aaKnown RBP4.77□□□□□ -1.65
LINC01965-204ENST00000545549 STXBP5LQ9Y2K9 1186 aa4.77□□□□□ -1.65
LINC01965-204ENST00000545549 NSD3Q9BZ95 1437 aa4.77□□□□□ -1.65
LINC01965-204ENST00000545549 TUBGCP6Q96RT7 1819 aa4.76□□□□□ -1.65
LINC01965-204ENST00000545549 WNK3Q9BYP7 1800 aa4.76□□□□□ -1.65
LINC01965-204ENST00000545549 LTN1O94822 1766 aa4.76□□□□□ -1.65
LINC01965-204ENST00000545549 TMEM265A0A087WTH1 108 aa4.76□□□□□ -1.65
LINC01965-204ENST00000545549 MS4A1P11836 297 aa4.76□□□□□ -1.65
LINC01965-204ENST00000545549 HOXC9P31274 260 aa4.76□□□□□ -1.65
LINC01965-204ENST00000545549 SSTR3P32745 418 aaPredicted RBP4.76□□□□□ -1.65
LINC01965-204ENST00000545549 SLC27A3Q5K4L6 730 aa4.76□□□□□ -1.65
LINC01965-204ENST00000545549 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.76□□□□□ -1.65
LINC01965-204ENST00000545549 MARCH10Q8NA82 808 aaPredicted RBP4.76□□□□□ -1.65
LINC01965-204ENST00000545549 CAPNS2Q96L46 248 aa4.76□□□□□ -1.65
LINC01965-204ENST00000545549 FAM217BQ9NTX9 383 aaPredicted RBP4.76□□□□□ -1.65
LINC01965-204ENST00000545549 UNC79Q9P2D8 2635 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms