RNA–Protein interactions for RNA: ENST00000544913.2

HMGCS2-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 2 BASIC

Gene HMGCS2, Length 1,925 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-204ENST00000544913 JARID2Q92833 1246 aaPredicted RBP8.77□□□□□ -1.01
HMGCS2-204ENST00000544913 USP42Q9H9J4 1324 aaKnown RBP8.76□□□□□ -1.01
HMGCS2-204ENST00000544913 RGL2O15211 777 aa8.76□□□□□ -1.01
HMGCS2-204ENST00000544913 GNAI2P04899 355 aa8.76□□□□□ -1.01
HMGCS2-204ENST00000544913 UBTFL1P0CB47 393 aaPredicted RBP8.76□□□□□ -1.01
HMGCS2-204ENST00000544913 POLA2Q14181 598 aa8.76□□□□□ -1.01
HMGCS2-204ENST00000544913 KIF6Q6ZMV9 814 aa8.76□□□□□ -1.01
HMGCS2-204ENST00000544913 CCDC191Q8NCU4 936 aa8.76□□□□□ -1.01
HMGCS2-204ENST00000544913 ARHGEF1Q92888 912 aaKnown RBP8.76□□□□□ -1.01
HMGCS2-204ENST00000544913 SRP68Q9UHB9 627 aaKnown RBP8.76□□□□□ -1.01
HMGCS2-204ENST00000544913 NEXNQ0ZGT2 675 aa8.76□□□□□ -1.01
HMGCS2-204ENST00000544913 RABL6Q3YEC7 729 aaPredicted RBP8.76□□□□□ -1.01
HMGCS2-204ENST00000544913 RPAP2Q8IXW5 612 aaPredicted RBP8.76□□□□□ -1.01
HMGCS2-204ENST00000544913 SYNE4Q8N205 404 aa8.76□□□□□ -1.01
HMGCS2-204ENST00000544913 ANO8Q9HCE9 1232 aaPredicted RBP8.76□□□□□ -1.01
HMGCS2-204ENST00000544913 NARFQ9UHQ1 456 aa8.76□□□□□ -1.01
HMGCS2-204ENST00000544913 GPTP24298 496 aa8.75□□□□□ -1.01
HMGCS2-204ENST00000544913 FOXO4P98177 505 aa8.75□□□□□ -1.01
HMGCS2-204ENST00000544913 ATP8B2P98198 1209 aa8.75□□□□□ -1.01
HMGCS2-204ENST00000544913 UBE3BQ7Z3V4 1068 aa8.75□□□□□ -1.01
HMGCS2-204ENST00000544913 SSH3Q8TE77 659 aa8.75□□□□□ -1.01
HMGCS2-204ENST00000544913 CHMP4BQ9H444 224 aaKnown RBP8.75□□□□□ -1.01
HMGCS2-204ENST00000544913 BICC1Q9H694 974 aaKnown RBP8.75□□□□□ -1.01
HMGCS2-204ENST00000544913 CWC25Q9NXE8 425 aaPredicted RBP8.75□□□□□ -1.01
HMGCS2-204ENST00000544913 ZBTB47Q9UFB7 747 aaPredicted RBP8.75□□□□□ -1.01
HMGCS2-204ENST00000544913 NOP58Q9Y2X3 529 aaKnown RBP8.75□□□□□ -1.01
HMGCS2-204ENST00000544913 DDX60Q8IY21 1712 aaKnown RBP8.75□□□□□ -1.01
HMGCS2-204ENST00000544913 LAMB2P55268 1798 aa8.74□□□□□ -1.01
HMGCS2-204ENST00000544913 A0A087WZG4 1122 aa8.74□□□□□ -1.01
HMGCS2-204ENST00000544913 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.74□□□□□ -1.01
HMGCS2-204ENST00000544913 EN1Q05925 392 aaPredicted RBP8.74□□□□□ -1.01
HMGCS2-204ENST00000544913 EZH2Q15910 746 aaKnown RBP8.74□□□□□ -1.01
HMGCS2-204ENST00000544913 USPL1Q5W0Q7 1092 aa8.74□□□□□ -1.01
HMGCS2-204ENST00000544913 CLEC4GQ6UXB4 293 aa8.74□□□□□ -1.01
HMGCS2-204ENST00000544913 DEFB132Q7Z7B7 95 aa8.74□□□□□ -1.01
HMGCS2-204ENST00000544913 DDRGK1Q96HY6 314 aa8.74□□□□□ -1.01
HMGCS2-204ENST00000544913 DCTPP1Q9H773 170 aa8.74□□□□□ -1.01
HMGCS2-204ENST00000544913 RTCBQ9Y3I0 505 aaKnown RBP8.74□□□□□ -1.01
HMGCS2-204ENST00000544913 COL4A1P02462 1669 aa8.74□□□□□ -1.01
HMGCS2-204ENST00000544913 QSER1Q2KHR3 1735 aa8.74□□□□□ -1.01
HMGCS2-204ENST00000544913 NTSR2O95665 410 aa8.74□□□□□ -1.01
HMGCS2-204ENST00000544913 PCCAP05165 728 aaPredicted RBP8.74□□□□□ -1.01
HMGCS2-204ENST00000544913 SSFA2P28290 1259 aa8.74□□□□□ -1.01
HMGCS2-204ENST00000544913 RFX5P48382 616 aaPredicted RBP8.74□□□□□ -1.01
HMGCS2-204ENST00000544913 SUSD4Q5VX71 490 aa8.74□□□□□ -1.01
HMGCS2-204ENST00000544913 PPP1R42Q7Z4L9 355 aa8.74□□□□□ -1.01
HMGCS2-204ENST00000544913 AK7Q96M32 723 aa8.74□□□□□ -1.01
HMGCS2-204ENST00000544913 RWDD1Q9H446 243 aaPredicted RBP8.74□□□□□ -1.01
HMGCS2-204ENST00000544913 C9orf78Q9NZ63 289 aaPredicted RBP8.74□□□□□ -1.01
HMGCS2-204ENST00000544913 CDHR2Q9BYE9 1310 aa8.73□□□□□ -1.01
HMGCS2-204ENST00000544913 LRP5O75197 1615 aa8.73□□□□□ -1.01
HMGCS2-204ENST00000544913 SOCS7O14512 581 aa8.73□□□□□ -1.01
HMGCS2-204ENST00000544913 HSP90AB3PQ58FF7 597 aa8.73□□□□□ -1.01
HMGCS2-204ENST00000544913 TBC1D9BQ66K14 1250 aa8.73□□□□□ -1.01
HMGCS2-204ENST00000544913 ZBTB38Q8NAP3 1195 aaPredicted RBP8.73□□□□□ -1.01
HMGCS2-204ENST00000544913 FAM89AQ96GI7 184 aa8.73□□□□□ -1.01
HMGCS2-204ENST00000544913 PLA2G12BQ9BX93 195 aa8.73□□□□□ -1.01
HMGCS2-204ENST00000544913 ABCC12Q96J65 1359 aa8.73□□□□□ -1.01
HMGCS2-204ENST00000544913 PNPLA7Q6ZV29 1317 aa8.73□□□□□ -1.01
HMGCS2-204ENST00000544913 PHF14O94880 888 aa8.72□□□□□ -1.01
HMGCS2-204ENST00000544913 GYS1P13807 737 aa8.72□□□□□ -1.01
HMGCS2-204ENST00000544913 FAM161AQ3B820 660 aa8.72□□□□□ -1.01
HMGCS2-204ENST00000544913 RTL5Q5HYW3 569 aaPredicted RBP8.72□□□□□ -1.01
HMGCS2-204ENST00000544913 PDZRN3Q9UPQ7 1066 aa8.72□□□□□ -1.01
HMGCS2-204ENST00000544913 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.72□□□□□ -1.01
HMGCS2-204ENST00000544913 TNRC6CQ9HCJ0 1690 aaKnown RBP8.72□□□□□ -1.01
HMGCS2-204ENST00000544913 NUCB1Q02818 461 aa8.72□□□□□ -1.01
HMGCS2-204ENST00000544913 TRAPPC3LQ5T215 181 aa8.72□□□□□ -1.01
HMGCS2-204ENST00000544913 C3orf67Q6ZVT6 689 aa8.72□□□□□ -1.01
HMGCS2-204ENST00000544913 COL23A1Q86Y22 540 aaPredicted RBP8.72□□□□□ -1.01
HMGCS2-204ENST00000544913 ARXQ96QS3 562 aa8.72□□□□□ -1.01
HMGCS2-204ENST00000544913 NIP7Q9Y221 180 aaKnown RBP eCLIP8.72□□□□□ -1.01
HMGCS2-204ENST00000544913 CASZ1Q86V15 1759 aa8.72□□□□□ -1.01
HMGCS2-204ENST00000544913 SRGAP3O43295 1099 aa8.71□□□□□ -1.02
HMGCS2-204ENST00000544913 CSF1RP07333 972 aa8.71□□□□□ -1.02
HMGCS2-204ENST00000544913 NFIXQ14938 502 aa8.71□□□□□ -1.02
HMGCS2-204ENST00000544913 NRXN2Q9P2S2 1712 aa8.71□□□□□ -1.02
HMGCS2-204ENST00000544913 MYH3P11055 1940 aa8.71□□□□□ -1.02
HMGCS2-204ENST00000544913 DDR1Q08345 913 aa8.7□□□□□ -1.02
HMGCS2-204ENST00000544913 PARP10Q53GL7 1025 aa8.7□□□□□ -1.02
HMGCS2-204ENST00000544913 LMBR1LQ6UX01 489 aa8.7□□□□□ -1.02
HMGCS2-204ENST00000544913 KLHDC4Q8TBB5 520 aa8.7□□□□□ -1.02
HMGCS2-204ENST00000544913 GCC1Q96CN9 775 aa8.7□□□□□ -1.02
HMGCS2-204ENST00000544913 PA2G4Q9UQ80 394 aaKnown RBP8.7□□□□□ -1.02
HMGCS2-204ENST00000544913 EXOC6BQ9Y2D4 811 aa8.7□□□□□ -1.02
HMGCS2-204ENST00000544913 SALL3Q9BXA9 1300 aa8.7□□□□□ -1.02
HMGCS2-204ENST00000544913 TM4SF1P30408 202 aa8.7□□□□□ -1.02
HMGCS2-204ENST00000544913 PTPN12Q05209 780 aaKnown RBP8.7□□□□□ -1.02
HMGCS2-204ENST00000544913 TTLL11Q8NHH1 800 aa8.7□□□□□ -1.02
HMGCS2-204ENST00000544913 PDGFDQ9GZP0 370 aaPredicted RBP8.7□□□□□ -1.02
HMGCS2-204ENST00000544913 TRMT112Q9UI30 125 aaKnown RBP8.7□□□□□ -1.02
HMGCS2-204ENST00000544913 ZNF652Q9Y2D9 606 aa8.7□□□□□ -1.02
HMGCS2-204ENST00000544913 SH3TC1Q8TE82 1336 aa8.69□□□□□ -1.02
HMGCS2-204ENST00000544913 IRS4O14654 1257 aaPredicted RBP8.69□□□□□ -1.02
HMGCS2-204ENST00000544913 ZPR1O75312 459 aa8.69□□□□□ -1.02
HMGCS2-204ENST00000544913 RFC4P35249 363 aa8.69□□□□□ -1.02
HMGCS2-204ENST00000544913 SLC15A2Q16348 729 aa8.69□□□□□ -1.02
HMGCS2-204ENST00000544913 NUTM1Q86Y26 1132 aa8.69□□□□□ -1.02
HMGCS2-204ENST00000544913 OTUD7AQ8TE49 926 aaPredicted RBP8.69□□□□□ -1.02
HMGCS2-204ENST00000544913 UTP14AQ9BVJ6 771 aaKnown RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms