RNA–Protein interactions for RNA: ENST00000544652.1

DDX11-227, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-227ENST00000544652 NFIXQ14938 502 aa16.6■□□□□ 0.25
DDX11-227ENST00000544652 INTS3Q68E01 1043 aaKnown RBP16.6■□□□□ 0.25
DDX11-227ENST00000544652 MTFR1LQ9H019 292 aa16.6■□□□□ 0.25
DDX11-227ENST00000544652 NEURL1BA8MQ27 555 aa16.59■□□□□ 0.25
DDX11-227ENST00000544652 ALDH1L1O75891 902 aa16.59■□□□□ 0.25
DDX11-227ENST00000544652 MS4A1P11836 297 aa16.59■□□□□ 0.25
DDX11-227ENST00000544652 PDE3AQ14432 1141 aa16.59■□□□□ 0.25
DDX11-227ENST00000544652 PARP10Q53GL7 1025 aa16.59■□□□□ 0.25
DDX11-227ENST00000544652 NLRP10Q86W26 655 aa16.59■□□□□ 0.25
DDX11-227ENST00000544652 DZIP1LQ8IYY4 767 aaKnown RBP16.59■□□□□ 0.25
DDX11-227ENST00000544652 CCDC191Q8NCU4 936 aa16.59■□□□□ 0.25
DDX11-227ENST00000544652 NIP7Q9Y221 180 aaKnown RBP eCLIP16.59■□□□□ 0.25
DDX11-227ENST00000544652 SUPT16HQ9Y5B9 1047 aaKnown RBP16.59■□□□□ 0.25
DDX11-227ENST00000544652 CARMIL3Q8ND23 1372 aa16.59■□□□□ 0.25
DDX11-227ENST00000544652 TNRC6CQ9HCJ0 1690 aaKnown RBP16.59■□□□□ 0.25
DDX11-227ENST00000544652 KIAA1551Q9HCM1 1747 aa16.59■□□□□ 0.25
DDX11-227ENST00000544652 ATP5J2-PTCD1G3V325 749 aa16.58■□□□□ 0.24
DDX11-227ENST00000544652 RLBP1P12271 317 aa16.58■□□□□ 0.24
DDX11-227ENST00000544652 CCT4P50991 539 aaKnown RBP16.58■□□□□ 0.24
DDX11-227ENST00000544652 CWF19L2Q2TBE0 894 aaKnown RBP16.58■□□□□ 0.24
DDX11-227ENST00000544652 SLC4A10Q6U841 1118 aa16.58■□□□□ 0.24
DDX11-227ENST00000544652 SETDB2Q96T68 719 aa16.58■□□□□ 0.24
DDX11-227ENST00000544652 SRCIN1Q9C0H9 1055 aa16.58■□□□□ 0.24
DDX11-227ENST00000544652 LRP5O75197 1615 aa16.58■□□□□ 0.24
DDX11-227ENST00000544652 BRCA1P38398 1863 aaKnown RBP16.57■□□□□ 0.24
DDX11-227ENST00000544652 POLRMTO00411 1230 aaKnown RBP16.57■□□□□ 0.24
DDX11-227ENST00000544652 CAPN15O75808 1086 aa16.57■□□□□ 0.24
DDX11-227ENST00000544652 GPTP24298 496 aa16.57■□□□□ 0.24
DDX11-227ENST00000544652 VASPP50552 380 aaPredicted RBP16.57■□□□□ 0.24
DDX11-227ENST00000544652 DDR1Q08345 913 aa16.57■□□□□ 0.24
DDX11-227ENST00000544652 CLUAP1Q96AJ1 413 aa16.57■□□□□ 0.24
DDX11-227ENST00000544652 SGIP1Q9BQI5 828 aa16.57■□□□□ 0.24
DDX11-227ENST00000544652 CACNA1SQ13698 1873 aa16.56■□□□□ 0.24
DDX11-227ENST00000544652 ZBTB7AO95365 584 aa16.56■□□□□ 0.24
DDX11-227ENST00000544652 GCKRQ14397 625 aa16.56■□□□□ 0.24
DDX11-227ENST00000544652 SUSD4Q5VX71 490 aa16.56■□□□□ 0.24
DDX11-227ENST00000544652 MSL1Q68DK7 614 aa16.56■□□□□ 0.24
DDX11-227ENST00000544652 BICDL1Q6ZP65 573 aa16.56■□□□□ 0.24
DDX11-227ENST00000544652 TMEM57Q8N5G2 664 aa16.56■□□□□ 0.24
DDX11-227ENST00000544652 CWC25Q9NXE8 425 aaPredicted RBP16.56■□□□□ 0.24
DDX11-227ENST00000544652 COL11A2P13942 1736 aaPredicted RBP16.56■□□□□ 0.24
DDX11-227ENST00000544652 RIC1Q4ADV7 1423 aa16.55■□□□□ 0.24
DDX11-227ENST00000544652 UTYO14607 1347 aa16.55■□□□□ 0.24
DDX11-227ENST00000544652 NTSR2O95665 410 aa16.55■□□□□ 0.24
DDX11-227ENST00000544652 MMP10P09238 476 aa16.55■□□□□ 0.24
DDX11-227ENST00000544652 C20orf194Q5TEA3 1177 aa16.55■□□□□ 0.24
DDX11-227ENST00000544652 PPP1R42Q7Z4L9 355 aa16.55■□□□□ 0.24
DDX11-227ENST00000544652 FTSJ3Q8IY81 847 aaKnown RBP16.55■□□□□ 0.24
DDX11-227ENST00000544652 PANK1Q8TE04 598 aa16.55■□□□□ 0.24
DDX11-227ENST00000544652 TAF1P21675 1872 aa16.54■□□□□ 0.24
DDX11-227ENST00000544652 SERPINB2P05120 415 aa16.54■□□□□ 0.24
DDX11-227ENST00000544652 NYXQ9GZU5 481 aa16.54■□□□□ 0.24
DDX11-227ENST00000544652 H7C1W4 665 aa16.53■□□□□ 0.24
DDX11-227ENST00000544652 PCCAP05165 728 aaPredicted RBP16.53■□□□□ 0.24
DDX11-227ENST00000544652 PTGER2P43116 358 aa16.53■□□□□ 0.24
DDX11-227ENST00000544652 CASP7P55210 303 aa16.53■□□□□ 0.24
DDX11-227ENST00000544652 MVPQ14764 893 aaKnown RBP16.53■□□□□ 0.24
DDX11-227ENST00000544652 ZBTB38Q8NAP3 1195 aaPredicted RBP16.53■□□□□ 0.24
DDX11-227ENST00000544652 UTP14AQ9BVJ6 771 aaKnown RBP16.53■□□□□ 0.24
DDX11-227ENST00000544652 USP44Q9H0E7 712 aa16.53■□□□□ 0.24
DDX11-227ENST00000544652 PARP3Q9Y6F1 533 aa16.53■□□□□ 0.24
DDX11-227ENST00000544652 SPEF2Q9C093 1822 aa16.53■□□□□ 0.24
DDX11-227ENST00000544652 CDHR2Q9BYE9 1310 aa16.52■□□□□ 0.24
DDX11-227ENST00000544652 GRM8O00222 908 aa16.52■□□□□ 0.24
DDX11-227ENST00000544652 PRR5LQ6MZQ0 368 aa16.52■□□□□ 0.24
DDX11-227ENST00000544652 TPTE2Q6XPS3 522 aa16.52■□□□□ 0.24
DDX11-227ENST00000544652 NBPF5PQ86XG9 351 aaPredicted RBP16.52■□□□□ 0.24
DDX11-227ENST00000544652 SH3TC1Q8TE82 1336 aa16.51■□□□□ 0.23
DDX11-227ENST00000544652 SLC10A5Q5PT55 438 aa16.51■□□□□ 0.23
DDX11-227ENST00000544652 SPON1Q9HCB6 807 aa16.51■□□□□ 0.23
DDX11-227ENST00000544652 TRMT112Q9UI30 125 aaKnown RBP16.51■□□□□ 0.23
DDX11-227ENST00000544652 C10orf71Q711Q0 1435 aa16.51■□□□□ 0.23
DDX11-227ENST00000544652 ZBTB7BO15156 539 aaPredicted RBP16.5■□□□□ 0.23
DDX11-227ENST00000544652 NBPF7P0C2Y1 421 aaPredicted RBP16.5■□□□□ 0.23
DDX11-227ENST00000544652 POLD1P28340 1107 aa16.5■□□□□ 0.23
DDX11-227ENST00000544652 ITPRIPQ8IWB1 547 aa16.5■□□□□ 0.23
DDX11-227ENST00000544652 CNBD1Q8NA66 436 aa16.5■□□□□ 0.23
DDX11-227ENST00000544652 COG6Q9Y2V7 657 aa16.5■□□□□ 0.23
DDX11-227ENST00000544652 ABCC12Q96J65 1359 aa16.5■□□□□ 0.23
DDX11-227ENST00000544652 A0A1B0GUL6 1792 aa16.49■□□□□ 0.23
DDX11-227ENST00000544652 FAM177BA6PVY3 158 aa16.49■□□□□ 0.23
DDX11-227ENST00000544652 ERFEQ4G0M1 354 aa16.49■□□□□ 0.23
DDX11-227ENST00000544652 UBE3BQ7Z3V4 1068 aa16.49■□□□□ 0.23
DDX11-227ENST00000544652 NUTM1Q86Y26 1132 aa16.49■□□□□ 0.23
DDX11-227ENST00000544652 FAM89AQ96GI7 184 aa16.49■□□□□ 0.23
DDX11-227ENST00000544652 C9orf78Q9NZ63 289 aaPredicted RBP16.49■□□□□ 0.23
DDX11-227ENST00000544652 DDX19BQ9UMR2 479 aa16.49■□□□□ 0.23
DDX11-227ENST00000544652 SYNE4Q8N205 404 aa16.48■□□□□ 0.23
DDX11-227ENST00000544652 MEIS3Q99687 375 aa16.48■□□□□ 0.23
DDX11-227ENST00000544652 PLA2G12BQ9BX93 195 aa16.48■□□□□ 0.23
DDX11-227ENST00000544652 GNAI3P08754 354 aa16.47■□□□□ 0.23
DDX11-227ENST00000544652 ST5P78524 1137 aa16.47■□□□□ 0.23
DDX11-227ENST00000544652 ARFGEF1Q9Y6D6 1849 aa16.47■□□□□ 0.23
DDX11-227ENST00000544652 IRS4O14654 1257 aaPredicted RBP16.46■□□□□ 0.23
DDX11-227ENST00000544652 GTF2E1P29083 439 aaPredicted RBP16.46■□□□□ 0.23
DDX11-227ENST00000544652 JARID2Q92833 1246 aaPredicted RBP16.46■□□□□ 0.23
DDX11-227ENST00000544652 KAZALD1Q96I82 304 aa16.46■□□□□ 0.23
DDX11-227ENST00000544652 BRIP1Q9BX63 1249 aa16.46■□□□□ 0.23
DDX11-227ENST00000544652 CHMP4BQ9H444 224 aaKnown RBP16.46■□□□□ 0.23
DDX11-227ENST00000544652 KLRG2A4D1S0 409 aaPredicted RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms