RNA–Protein interactions for RNA: ENST00000544588.1

CIT-214, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-214ENST00000544588 KDM3BQ7LBC6 1761 aa17.01■□□□□ 0.31
CIT-214ENST00000544588 NRXN2Q9P2S2 1712 aa17.01■□□□□ 0.31
CIT-214ENST00000544588 ATP5J2-PTCD1G3V325 749 aa17■□□□□ 0.31
CIT-214ENST00000544588 HCLS1P14317 486 aaPredicted RBP17■□□□□ 0.31
CIT-214ENST00000544588 C7orf43Q8WVR3 580 aa17■□□□□ 0.31
CIT-214ENST00000544588 AFDNP55196 1824 aaKnown RBP16.99■□□□□ 0.31
CIT-214ENST00000544588 GLTPD2A6NH11 291 aa16.99■□□□□ 0.31
CIT-214ENST00000544588 TOMM70O94826 608 aa16.99■□□□□ 0.31
CIT-214ENST00000544588 GOLGA2Q08379 1002 aa16.99■□□□□ 0.31
CIT-214ENST00000544588 CCDC27Q2M243 656 aa16.99■□□□□ 0.31
CIT-214ENST00000544588 CRY2Q49AN0 593 aa16.99■□□□□ 0.31
CIT-214ENST00000544588 RTKN2Q8IZC4 609 aa16.99■□□□□ 0.31
CIT-214ENST00000544588 CHMP4AQ9BY43 222 aa16.99■□□□□ 0.31
CIT-214ENST00000544588 TMX4Q9H1E5 349 aaPredicted RBP16.99■□□□□ 0.31
CIT-214ENST00000544588 ZNF277Q9NRM2 450 aaPredicted RBP16.99■□□□□ 0.31
CIT-214ENST00000544588 FKBP4Q02790 459 aaKnown RBP eCLIP16.98■□□□□ 0.31
CIT-214ENST00000544588 CCDC30Q5VVM6 783 aa16.98■□□□□ 0.31
CIT-214ENST00000544588 C3orf67Q6ZVT6 689 aa16.98■□□□□ 0.31
CIT-214ENST00000544588 SYNE4Q8N205 404 aa16.98■□□□□ 0.31
CIT-214ENST00000544588 TSPYL6Q8N831 410 aa16.98■□□□□ 0.31
CIT-214ENST00000544588 PHAXQ9H814 394 aaKnown RBP16.98■□□□□ 0.31
CIT-214ENST00000544588 IBTKQ9P2D0 1353 aaPredicted RBP16.98■□□□□ 0.31
CIT-214ENST00000544588 ZC3H4Q9UPT8 1303 aaKnown RBP16.97■□□□□ 0.31
CIT-214ENST00000544588 RTL5Q5HYW3 569 aaPredicted RBP16.97■□□□□ 0.31
CIT-214ENST00000544588 SLC10A5Q5PT55 438 aa16.97■□□□□ 0.31
CIT-214ENST00000544588 SH3TC1Q8TE82 1336 aa16.96■□□□□ 0.31
CIT-214ENST00000544588 LTBP3Q9NS15 1303 aa16.96■□□□□ 0.31
CIT-214ENST00000544588 PPEF1O14829 653 aaPredicted RBP16.96■□□□□ 0.31
CIT-214ENST00000544588 HOXA10P31260 410 aaPredicted RBP16.96■□□□□ 0.31
CIT-214ENST00000544588 CRAMP1Q96RY5 1269 aa16.96■□□□□ 0.31
CIT-214ENST00000544588 DDX58O95786 925 aaKnown RBP16.95■□□□□ 0.3
CIT-214ENST00000544588 VEGFAP15692 232 aaPredicted RBP16.95■□□□□ 0.3
CIT-214ENST00000544588 HSPA6P17066 643 aa16.95■□□□□ 0.3
CIT-214ENST00000544588 DDX46Q7L014 1031 aaKnown RBP16.95■□□□□ 0.3
CIT-214ENST00000544588 FAM89AQ96GI7 184 aa16.95■□□□□ 0.3
CIT-214ENST00000544588 STK31Q9BXU1 1019 aa16.95■□□□□ 0.3
CIT-214ENST00000544588 BCORQ6W2J9 1755 aa16.94■□□□□ 0.3
CIT-214ENST00000544588 TWISTNBQ3B726 338 aaPredicted RBP16.94■□□□□ 0.3
CIT-214ENST00000544588 CC2D2BQ6DHV5 1058 aa16.94■□□□□ 0.3
CIT-214ENST00000544588 MYD88Q99836 296 aa16.94■□□□□ 0.3
CIT-214ENST00000544588 ISCA1Q9BUE6 129 aa16.94■□□□□ 0.3
CIT-214ENST00000544588 LAMB4A4D0S4 1761 aa16.94■□□□□ 0.3
CIT-214ENST00000544588 RNF123Q5XPI4 1314 aa16.94■□□□□ 0.3
CIT-214ENST00000544588 DDNO94850 711 aaPredicted RBP16.93■□□□□ 0.3
CIT-214ENST00000544588 IARSP41252 1262 aaKnown RBP16.93■□□□□ 0.3
CIT-214ENST00000544588 RBM46Q8TBY0 533 aaKnown RBP16.93■□□□□ 0.3
CIT-214ENST00000544588 IL16Q14005 1332 aa16.93■□□□□ 0.3
CIT-214ENST00000544588 NCBP3Q53F19 620 aaKnown RBP16.92■□□□□ 0.3
CIT-214ENST00000544588 WDR63Q8IWG1 891 aa16.92■□□□□ 0.3
CIT-214ENST00000544588 JDP2Q8WYK2 163 aa16.92■□□□□ 0.3
CIT-214ENST00000544588 BRCA1P38398 1863 aaKnown RBP16.91■□□□□ 0.3
CIT-214ENST00000544588 IRS4O14654 1257 aaPredicted RBP16.91■□□□□ 0.3
CIT-214ENST00000544588 BBOX1O75936 387 aa16.91■□□□□ 0.3
CIT-214ENST00000544588 ABCC4O15439 1325 aa16.91■□□□□ 0.3
CIT-214ENST00000544588 ANKRD31Q8N7Z5 1873 aa16.9■□□□□ 0.3
CIT-214ENST00000544588 SLC4A2P04920 1241 aa16.9■□□□□ 0.3
CIT-214ENST00000544588 TRIM28Q13263 835 aaKnown RBP16.9■□□□□ 0.3
CIT-214ENST00000544588 GRIPAP1Q4V328 841 aa16.9■□□□□ 0.3
CIT-214ENST00000544588 SLC51AQ86UW1 340 aa16.9■□□□□ 0.3
CIT-214ENST00000544588 LARGE2Q8N3Y3 721 aa16.9■□□□□ 0.3
CIT-214ENST00000544588 JARID2Q92833 1246 aaPredicted RBP16.9■□□□□ 0.3
CIT-214ENST00000544588 PSMD1Q99460 953 aa16.9■□□□□ 0.3
CIT-214ENST00000544588 MAP3K2Q9Y2U5 619 aa16.9■□□□□ 0.3
CIT-214ENST00000544588 ATP6V0A2Q9Y487 856 aa16.9■□□□□ 0.3
CIT-214ENST00000544588 ARFGEF1Q9Y6D6 1849 aa16.9■□□□□ 0.3
CIT-214ENST00000544588 FSTL1Q12841 308 aa16.89■□□□□ 0.29
CIT-214ENST00000544588 GRAPQ13588 217 aa16.89■□□□□ 0.29
CIT-214ENST00000544588 SMC1BQ8NDV3 1235 aa16.89■□□□□ 0.29
CIT-214ENST00000544588 GRAPLQ8TC17 118 aaPredicted RBP16.89■□□□□ 0.29
CIT-214ENST00000544588 METTL22Q9BUU2 404 aaPredicted RBP16.89■□□□□ 0.29
CIT-214ENST00000544588 FANCIQ9NVI1 1328 aa16.89■□□□□ 0.29
CIT-214ENST00000544588 RIC1Q4ADV7 1423 aa16.88■□□□□ 0.29
CIT-214ENST00000544588 PI4KAP2A4QPH2 592 aa16.88■□□□□ 0.29
CIT-214ENST00000544588 EIF6P56537 245 aaKnown RBP16.88■□□□□ 0.29
CIT-214ENST00000544588 EXOSC9Q06265 439 aaKnown RBP16.88■□□□□ 0.29
CIT-214ENST00000544588 KSR2Q6VAB6 950 aa16.88■□□□□ 0.29
CIT-214ENST00000544588 PI4KAP1Q8N8J0 262 aa16.88■□□□□ 0.29
CIT-214ENST00000544588 ZBTB38Q8NAP3 1195 aaPredicted RBP16.88■□□□□ 0.29
CIT-214ENST00000544588 CWC25Q9NXE8 425 aaPredicted RBP16.88■□□□□ 0.29
CIT-214ENST00000544588 COL11A2P13942 1736 aaPredicted RBP16.87■□□□□ 0.29
CIT-214ENST00000544588 SLX4Q8IY92 1834 aa16.87■□□□□ 0.29
CIT-214ENST00000544588 POTECB2RU33 542 aa16.87■□□□□ 0.29
CIT-214ENST00000544588 PPIP5K2O43314 1243 aa16.87■□□□□ 0.29
CIT-214ENST00000544588 HSP90B1P14625 803 aaKnown RBP16.87■□□□□ 0.29
CIT-214ENST00000544588 APLP1P51693 650 aa16.87■□□□□ 0.29
CIT-214ENST00000544588 NEXNQ0ZGT2 675 aa16.87■□□□□ 0.29
CIT-214ENST00000544588 DPP8Q6V1X1 898 aaPredicted RBP16.87■□□□□ 0.29
CIT-214ENST00000544588 G2E3Q7L622 706 aa16.87■□□□□ 0.29
CIT-214ENST00000544588 SP8Q8IXZ3 490 aa16.87■□□□□ 0.29
CIT-214ENST00000544588 MPNDQ8N594 471 aa16.87■□□□□ 0.29
CIT-214ENST00000544588 CCDC191Q8NCU4 936 aa16.87■□□□□ 0.29
CIT-214ENST00000544588 MYH16Q9H6N6 1097 aa16.87■□□□□ 0.29
CIT-214ENST00000544588 GJA3Q9Y6H8 435 aa16.87■□□□□ 0.29
CIT-214ENST00000544588 SF3B3Q15393 1217 aaKnown RBP16.86■□□□□ 0.29
CIT-214ENST00000544588 NIM1KQ8IY84 436 aa16.86■□□□□ 0.29
CIT-214ENST00000544588 SUPT20HQ8NEM7 779 aa16.86■□□□□ 0.29
CIT-214ENST00000544588 CCDC85AQ96PX6 553 aaPredicted RBP16.86■□□□□ 0.29
CIT-214ENST00000544588 SPINK5Q9NQ38 1064 aaPredicted RBP16.86■□□□□ 0.29
CIT-214ENST00000544588 ZNF541Q9H0D2 1346 aa16.86■□□□□ 0.29
CIT-214ENST00000544588 IQCA1LA6NCM1 817 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms