RNA–Protein interactions for RNA: ENST00000544474.5

PDZD4-209, Transcript of PDZ domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene PDZD4, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-209ENST00000544474 DHX16O60231 1041 aaKnown RBP15.08■□□□□ 0
PDZD4-209ENST00000544474 CYP2C19P33261 490 aa15.08■□□□□ 0
PDZD4-209ENST00000544474 ANAPC15P60006 121 aa15.08■□□□□ 0
PDZD4-209ENST00000544474 PATL2C9JE40 543 aaKnown RBP15.08■□□□□ 0
PDZD4-209ENST00000544474 IBSPP21815 317 aaPredicted RBP15.08■□□□□ 0
PDZD4-209ENST00000544474 CUL4AQ13619 759 aa15.08■□□□□ 0
PDZD4-209ENST00000544474 EIF4A2Q14240 407 aaKnown RBP15.08■□□□□ 0
PDZD4-209ENST00000544474 ADCK5Q3MIX3 580 aa15.08■□□□□ 0
PDZD4-209ENST00000544474 CDC37L1Q7L3B6 337 aa15.08■□□□□ 0
PDZD4-209ENST00000544474 RAB11FIP4Q86YS3 637 aa15.08■□□□□ 0
PDZD4-209ENST00000544474 PTPRMP28827 1452 aa15.08■□□□□ 0
PDZD4-209ENST00000544474 SRGAP3O43295 1099 aa15.07■□□□□ 0
PDZD4-209ENST00000544474 KRT85P78386 507 aa15.07■□□□□ 0
PDZD4-209ENST00000544474 CCDC144BQ3MJ40 725 aa15.07■□□□□ 0
PDZD4-209ENST00000544474 CCDC144CPQ8IYA2 1237 aa15.07■□□□□ 0
PDZD4-209ENST00000544474 OSBPL3Q9H4L5 887 aa15.07■□□□□ 0
PDZD4-209ENST00000544474 LIMCH1Q9UPQ0 1083 aa15.07■□□□□ 0
PDZD4-209ENST00000544474 NLRP6P59044 892 aa15.07■□□□□ 0
PDZD4-209ENST00000544474 SYT10Q6XYQ8 523 aa15.07■□□□□ 0
PDZD4-209ENST00000544474 FAM200AQ8TCP9 573 aa15.07■□□□□ 0
PDZD4-209ENST00000544474 FTOQ9C0B1 505 aaKnown RBP eCLIP15.07■□□□□ 0
PDZD4-209ENST00000544474 KMT5BQ4FZB7 885 aa15.07■□□□□ 0
PDZD4-209ENST00000544474 TTC6Q86TZ1 520 aa15.07■□□□□ 0
PDZD4-209ENST00000544474 NOP2P46087 812 aaKnown RBP15.06■□□□□ 0
PDZD4-209ENST00000544474 ZSCAN25Q6NSZ9 544 aa15.06■□□□□ 0
PDZD4-209ENST00000544474 FBXO38Q6PIJ6 1188 aa15.06■□□□□ 0
PDZD4-209ENST00000544474 GPATCH11Q8N954 259 aa15.06■□□□□ 0
PDZD4-209ENST00000544474 PAXBP1Q9Y5B6 917 aa15.06■□□□□ 0
PDZD4-209ENST00000544474 NDUFB9Q9Y6M9 179 aa15.06■□□□□ 0
PDZD4-209ENST00000544474 UBTFL1P0CB47 393 aaPredicted RBP15.06■□□□□ 0
PDZD4-209ENST00000544474 SAMD1Q6SPF0 538 aaPredicted RBP15.06■□□□□ 0
PDZD4-209ENST00000544474 RUFY3Q7L099 469 aa15.06■□□□□ 0
PDZD4-209ENST00000544474 BANK1Q8NDB2 785 aa15.06■□□□□ 0
PDZD4-209ENST00000544474 SDF4Q9BRK5 362 aa15.06■□□□□ 0
PDZD4-209ENST00000544474 MLH3Q9UHC1 1453 aa15.06■□□□□ 0
PDZD4-209ENST00000544474 RAB11FIP3O75154 756 aa15.05■□□□□ 0
PDZD4-209ENST00000544474 ICE2Q659A1 982 aa15.05■□□□□ 0
PDZD4-209ENST00000544474 URI1O94763 535 aaPredicted RBP15.05■□□□□ -0
PDZD4-209ENST00000544474 PRR29P0C7W0 189 aa15.05■□□□□ -0
PDZD4-209ENST00000544474 GOLGA8FQ08AF8 430 aa15.05■□□□□ -0
PDZD4-209ENST00000544474 GOLGA8DPQ0D2H9 430 aa15.05■□□□□ -0
PDZD4-209ENST00000544474 TEX35Q5T0J7 233 aa15.05■□□□□ -0
PDZD4-209ENST00000544474 MNS1Q8NEH6 495 aa15.05■□□□□ -0
PDZD4-209ENST00000544474 METP08581 1390 aa15.05■□□□□ -0
PDZD4-209ENST00000544474 NR1I2O75469 434 aa15.05■□□□□ -0
PDZD4-209ENST00000544474 SEC31AO94979 1220 aaKnown RBP15.05■□□□□ -0
PDZD4-209ENST00000544474 EDC4Q6P2E9 1401 aaKnown RBP15.04■□□□□ -0
PDZD4-209ENST00000544474 COL9A3Q14050 684 aaPredicted RBP15.04■□□□□ -0
PDZD4-209ENST00000544474 SNX14Q9Y5W7 946 aa15.04■□□□□ -0
PDZD4-209ENST00000544474 ARHGAP29Q52LW3 1261 aa15.04■□□□□ -0
PDZD4-209ENST00000544474 NCAPGQ9BPX3 1015 aa15.04■□□□□ -0
PDZD4-209ENST00000544474 CCDC69A6NI79 296 aa15.03■□□□□ -0
PDZD4-209ENST00000544474 GOLGA6L1Q8N7Z2 621 aa15.03■□□□□ -0
PDZD4-209ENST00000544474 CYP46A1Q9Y6A2 500 aa15.03■□□□□ -0
PDZD4-209ENST00000544474 TSPOAP1O95153 1857 aa15.03■□□□□ -0
PDZD4-209ENST00000544474 ACEP12821 1306 aa15.03■□□□□ -0
PDZD4-209ENST00000544474 PHACTR2O75167 634 aa15.03■□□□□ -0
PDZD4-209ENST00000544474 ZKSCAN1P17029 563 aaPredicted RBP15.03■□□□□ -0
PDZD4-209ENST00000544474 PDILTQ8N807 584 aa15.03■□□□□ -0
PDZD4-209ENST00000544474 CCDC8Q9H0W5 538 aaPredicted RBP15.03■□□□□ -0
PDZD4-209ENST00000544474 LTKP29376 864 aa15.02■□□□□ -0
PDZD4-209ENST00000544474 CASQ1P31415 396 aa15.02■□□□□ -0
PDZD4-209ENST00000544474 PPARDQ03181 441 aa15.02■□□□□ -0
PDZD4-209ENST00000544474 FLIIQ13045 1269 aa15.02■□□□□ -0
PDZD4-209ENST00000544474 LRRN4CLQ8ND94 238 aa15.02■□□□□ -0
PDZD4-209ENST00000544474 SRRTQ9BXP5 876 aaKnown RBP15.02■□□□□ -0
PDZD4-209ENST00000544474 DNAI1Q9UI46 699 aa15.02■□□□□ -0
PDZD4-209ENST00000544474 PA2G4Q9UQ80 394 aaKnown RBP15.02■□□□□ -0
PDZD4-209ENST00000544474 MAP2P11137 1827 aaKnown RBP15.02■□□□□ -0
PDZD4-209ENST00000544474 ATP8B2P98198 1209 aa15.02■□□□□ -0
PDZD4-209ENST00000544474 AIMP1Q12904 312 aaKnown RBP15.02■□□□□ -0
PDZD4-209ENST00000544474 BMS1Q14692 1282 aaKnown RBP15.02■□□□□ -0
PDZD4-209ENST00000544474 SF3A1Q15459 793 aaKnown RBP15.02■□□□□ -0
PDZD4-209ENST00000544474 CCDC30Q5VVM6 783 aa15.02■□□□□ -0
PDZD4-209ENST00000544474 MRVI1Q9Y6F6 885 aa15.02■□□□□ -0
PDZD4-209ENST00000544474 ARHGEF40Q8TER5 1519 aa15.02■□□□□ -0
PDZD4-209ENST00000544474 HECW2Q9P2P5 1572 aa15.02□□□□□ -0.01
PDZD4-209ENST00000544474 KIAA0232Q92628 1395 aa15.02□□□□□ -0.01
PDZD4-209ENST00000544474 ME1P48163 572 aa15.02□□□□□ -0.01
PDZD4-209ENST00000544474 PTH1RQ03431 593 aa15.02□□□□□ -0.01
PDZD4-209ENST00000544474 LARP1Q6PKG0 1096 aaKnown RBP15.02□□□□□ -0.01
PDZD4-209ENST00000544474 JAK2O60674 1132 aa15.01□□□□□ -0.01
PDZD4-209ENST00000544474 CCT2P78371 535 aaKnown RBP15.01□□□□□ -0.01
PDZD4-209ENST00000544474 EP400NLQ6ZTU2 488 aa15.01□□□□□ -0.01
PDZD4-209ENST00000544474 SIRT1Q96EB6 747 aa15.01□□□□□ -0.01
PDZD4-209ENST00000544474 BOLA2Q9H3K6 86 aa15.01□□□□□ -0.01
PDZD4-209ENST00000544474 RABEP2Q9H5N1 569 aa15.01□□□□□ -0.01
PDZD4-209ENST00000544474 CPSF1Q10570 1443 aaKnown RBP15.01□□□□□ -0.01
PDZD4-209ENST00000544474 CDK12Q9NYV4 1490 aaPredicted RBP15.01□□□□□ -0.01
PDZD4-209ENST00000544474 LMAN1P49257 510 aa15.01□□□□□ -0.01
PDZD4-209ENST00000544474 KRBA2Q6ZNG9 492 aa15.01□□□□□ -0.01
PDZD4-209ENST00000544474 TXLNBQ8N3L3 684 aa15.01□□□□□ -0.01
PDZD4-209ENST00000544474 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.01□□□□□ -0.01
PDZD4-209ENST00000544474 HTATSF1O43719 755 aaKnown RBP15.01□□□□□ -0.01
PDZD4-209ENST00000544474 TMC6Q7Z403 805 aa15.01□□□□□ -0.01
PDZD4-209ENST00000544474 PPP1R42Q7Z4L9 355 aa15.01□□□□□ -0.01
PDZD4-209ENST00000544474 AATKQ6ZMQ8 1374 aa15.01□□□□□ -0.01
PDZD4-209ENST00000544474 ATP7BP35670 1465 aa15□□□□□ -0.01
PDZD4-209ENST00000544474 ZNF75DP51815 510 aa15□□□□□ -0.01
PDZD4-209ENST00000544474 RBM6P78332 1123 aaKnown RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms