RNA–Protein interactions for RNA: ENST00000544432.5

VAMP1-208, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3

Gene VAMP1, Length 759 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-208ENST00000544432 WDR63Q8IWG1 891 aa18■□□□□ 0.47
VAMP1-208ENST00000544432 SBF1O95248 1867 aa18■□□□□ 0.47
VAMP1-208ENST00000544432 SLX4Q8IY92 1834 aa18■□□□□ 0.47
VAMP1-208ENST00000544432 ELL2O00472 640 aaPredicted RBP17.99■□□□□ 0.47
VAMP1-208ENST00000544432 KIF3CO14782 793 aa17.99■□□□□ 0.47
VAMP1-208ENST00000544432 CCDC30Q5VVM6 783 aa17.99■□□□□ 0.47
VAMP1-208ENST00000544432 ARFGEF2Q9Y6D5 1785 aa17.99■□□□□ 0.47
VAMP1-208ENST00000544432 TRIM28Q13263 835 aaKnown RBP17.98■□□□□ 0.47
VAMP1-208ENST00000544432 CCDC93Q567U6 631 aa17.98■□□□□ 0.47
VAMP1-208ENST00000544432 NLRP3Q96P20 1036 aa17.98■□□□□ 0.47
VAMP1-208ENST00000544432 CRAMP1Q96RY5 1269 aa17.98■□□□□ 0.47
VAMP1-208ENST00000544432 ISCA1Q9BUE6 129 aa17.98■□□□□ 0.47
VAMP1-208ENST00000544432 TAOK3Q9H2K8 898 aa17.98■□□□□ 0.47
VAMP1-208ENST00000544432 ZNF219Q9P2Y4 722 aaPredicted RBP17.98■□□□□ 0.47
VAMP1-208ENST00000544432 KDM2BQ8NHM5 1336 aa17.98■□□□□ 0.47
VAMP1-208ENST00000544432 RTKN2Q8IZC4 609 aa17.97■□□□□ 0.47
VAMP1-208ENST00000544432 TSPYL6Q8N831 410 aa17.97■□□□□ 0.47
VAMP1-208ENST00000544432 RPGRQ92834 1020 aaKnown RBP17.97■□□□□ 0.47
VAMP1-208ENST00000544432 CC2D2BQ6DHV5 1058 aa17.96■□□□□ 0.47
VAMP1-208ENST00000544432 FAM9BQ8IZU0 186 aa17.96■□□□□ 0.47
VAMP1-208ENST00000544432 TSR2Q969E8 191 aaKnown RBP17.96■□□□□ 0.47
VAMP1-208ENST00000544432 RBM17Q96I25 401 aaKnown RBP17.96■□□□□ 0.47
VAMP1-208ENST00000544432 TRMT112Q9UI30 125 aaKnown RBP17.96■□□□□ 0.47
VAMP1-208ENST00000544432 FER1L6Q2WGJ9 1857 aa17.96■□□□□ 0.47
VAMP1-208ENST00000544432 GLTPD2A6NH11 291 aa17.95■□□□□ 0.46
VAMP1-208ENST00000544432 GOLGA2Q08379 1002 aa17.95■□□□□ 0.46
VAMP1-208ENST00000544432 GRIPAP1Q4V328 841 aa17.95■□□□□ 0.46
VAMP1-208ENST00000544432 TNRC6CQ9HCJ0 1690 aaKnown RBP17.95■□□□□ 0.46
VAMP1-208ENST00000544432 SH3TC1Q8TE82 1336 aa17.95■□□□□ 0.46
VAMP1-208ENST00000544432 SENP3-EIF4A1A0A087X0R7 540 aa17.94■□□□□ 0.46
VAMP1-208ENST00000544432 FKBP4Q02790 459 aaKnown RBP eCLIP17.94■□□□□ 0.46
VAMP1-208ENST00000544432 C3orf67Q6ZVT6 689 aa17.94■□□□□ 0.46
VAMP1-208ENST00000544432 PHAXQ9H814 394 aaKnown RBP17.94■□□□□ 0.46
VAMP1-208ENST00000544432 ANKRD36CQ5JPF3 1778 aa17.94■□□□□ 0.46
VAMP1-208ENST00000544432 TWISTNBQ3B726 338 aaPredicted RBP17.93■□□□□ 0.46
VAMP1-208ENST00000544432 RIC3Q7Z5B4 369 aa17.93■□□□□ 0.46
VAMP1-208ENST00000544432 NMRK2Q9NPI5 230 aa17.93■□□□□ 0.46
VAMP1-208ENST00000544432 TOMM70O94826 608 aa17.92■□□□□ 0.46
VAMP1-208ENST00000544432 DDX58O95786 925 aaKnown RBP17.92■□□□□ 0.46
VAMP1-208ENST00000544432 PSMD1Q99460 953 aa17.92■□□□□ 0.46
VAMP1-208ENST00000544432 FANCIQ9NVI1 1328 aa17.92■□□□□ 0.46
VAMP1-208ENST00000544432 ATP5J2-PTCD1G3V325 749 aa17.91■□□□□ 0.46
VAMP1-208ENST00000544432 HCLS1P14317 486 aaPredicted RBP17.91■□□□□ 0.46
VAMP1-208ENST00000544432 DPY19L2Q6NUT2 758 aa17.91■□□□□ 0.46
VAMP1-208ENST00000544432 SYNE4Q8N205 404 aa17.91■□□□□ 0.46
VAMP1-208ENST00000544432 STK31Q9BXU1 1019 aa17.91■□□□□ 0.46
VAMP1-208ENST00000544432 SALL2Q9Y467 1007 aaPredicted RBP17.91■□□□□ 0.46
VAMP1-208ENST00000544432 SNED1Q8TER0 1413 aa17.9■□□□□ 0.46
VAMP1-208ENST00000544432 BBOX1O75936 387 aa17.9■□□□□ 0.46
VAMP1-208ENST00000544432 OLFM4Q6UX06 510 aa17.9■□□□□ 0.46
VAMP1-208ENST00000544432 CACNA1SQ13698 1873 aa17.89■□□□□ 0.45
VAMP1-208ENST00000544432 CCDC88AQ3V6T2 1871 aa17.89■□□□□ 0.45
VAMP1-208ENST00000544432 PPEF1O14829 653 aaPredicted RBP17.89■□□□□ 0.45
VAMP1-208ENST00000544432 ZBTB38Q8NAP3 1195 aaPredicted RBP17.89■□□□□ 0.45
VAMP1-208ENST00000544432 CCDC191Q8NCU4 936 aa17.89■□□□□ 0.45
VAMP1-208ENST00000544432 RBM46Q8TBY0 533 aaKnown RBP17.89■□□□□ 0.45
VAMP1-208ENST00000544432 METTL22Q9BUU2 404 aaPredicted RBP17.89■□□□□ 0.45
VAMP1-208ENST00000544432 RRAGCQ9HB90 399 aa17.89■□□□□ 0.45
VAMP1-208ENST00000544432 DICER1Q9UPY3 1922 aaKnown RBP17.89■□□□□ 0.45
VAMP1-208ENST00000544432 VAMP4O75379 141 aa17.88■□□□□ 0.45
VAMP1-208ENST00000544432 HSP90B1P14625 803 aaKnown RBP17.88■□□□□ 0.45
VAMP1-208ENST00000544432 VEGFAP15692 232 aaPredicted RBP17.88■□□□□ 0.45
VAMP1-208ENST00000544432 SF3B3Q15393 1217 aaKnown RBP17.88■□□□□ 0.45
VAMP1-208ENST00000544432 KSR2Q6VAB6 950 aa17.88■□□□□ 0.45
VAMP1-208ENST00000544432 DDX46Q7L014 1031 aaKnown RBP17.88■□□□□ 0.45
VAMP1-208ENST00000544432 FAM89AQ96GI7 184 aa17.88■□□□□ 0.45
VAMP1-208ENST00000544432 MYH16Q9H6N6 1097 aa17.88■□□□□ 0.45
VAMP1-208ENST00000544432 ZNF277Q9NRM2 450 aaPredicted RBP17.88■□□□□ 0.45
VAMP1-208ENST00000544432 ATP6V0A2Q9Y487 856 aa17.88■□□□□ 0.45
VAMP1-208ENST00000544432 ABCC4O15439 1325 aa17.88■□□□□ 0.45
VAMP1-208ENST00000544432 SLC4A2P04920 1241 aa17.87■□□□□ 0.45
VAMP1-208ENST00000544432 C16orf71Q8IYS4 520 aaPredicted RBP17.87■□□□□ 0.45
VAMP1-208ENST00000544432 MYD88Q99836 296 aa17.87■□□□□ 0.45
VAMP1-208ENST00000544432 SPINK5Q9NQ38 1064 aaPredicted RBP17.87■□□□□ 0.45
VAMP1-208ENST00000544432 ZNF521Q96K83 1311 aa17.87■□□□□ 0.45
VAMP1-208ENST00000544432 CCER2I3L3R5 266 aa17.86■□□□□ 0.45
VAMP1-208ENST00000544432 IRS4O14654 1257 aaPredicted RBP17.86■□□□□ 0.45
VAMP1-208ENST00000544432 PCCAP05165 728 aaPredicted RBP17.86■□□□□ 0.45
VAMP1-208ENST00000544432 IARSP41252 1262 aaKnown RBP17.86■□□□□ 0.45
VAMP1-208ENST00000544432 EXOSC9Q06265 439 aaKnown RBP17.86■□□□□ 0.45
VAMP1-208ENST00000544432 GRAPQ13588 217 aa17.86■□□□□ 0.45
VAMP1-208ENST00000544432 TMC4Q7Z404 712 aa17.86■□□□□ 0.45
VAMP1-208ENST00000544432 SP8Q8IXZ3 490 aa17.86■□□□□ 0.45
VAMP1-208ENST00000544432 GRAPLQ8TC17 118 aaPredicted RBP17.86■□□□□ 0.45
VAMP1-208ENST00000544432 TMX4Q9H1E5 349 aaPredicted RBP17.86■□□□□ 0.45
VAMP1-208ENST00000544432 VPS33BQ9H267 617 aa17.86■□□□□ 0.45
VAMP1-208ENST00000544432 CWC25Q9NXE8 425 aaPredicted RBP17.86■□□□□ 0.45
VAMP1-208ENST00000544432 MAP3K2Q9Y2U5 619 aa17.86■□□□□ 0.45
VAMP1-208ENST00000544432 TIAM2Q8IVF5 1701 aa17.86■□□□□ 0.45
VAMP1-208ENST00000544432 PI4KAP2A4QPH2 592 aa17.85■□□□□ 0.45
VAMP1-208ENST00000544432 HSPA6P17066 643 aa17.85■□□□□ 0.45
VAMP1-208ENST00000544432 FSTL1Q12841 308 aa17.85■□□□□ 0.45
VAMP1-208ENST00000544432 PI4KAP1Q8N8J0 262 aa17.85■□□□□ 0.45
VAMP1-208ENST00000544432 POTECB2RU33 542 aa17.84■□□□□ 0.45
VAMP1-208ENST00000544432 FZD9O00144 591 aa17.84■□□□□ 0.45
VAMP1-208ENST00000544432 RTFDC1Q9BY42 306 aaPredicted RBP17.84■□□□□ 0.45
VAMP1-208ENST00000544432 TCERG1O14776 1098 aaKnown RBP17.83■□□□□ 0.44
VAMP1-208ENST00000544432 IGKV5-2P06315 115 aa17.83■□□□□ 0.44
VAMP1-208ENST00000544432 NEXNQ0ZGT2 675 aa17.83■□□□□ 0.44
VAMP1-208ENST00000544432 G2E3Q7L622 706 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms