RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 CWC27Q6UX04 472 aaKnown RBP20.7■□□□□ 0.9
PTPRO-209ENST00000543886 PALD1Q9ULE6 856 aa20.7■□□□□ 0.9
PTPRO-209ENST00000543886 LMBR1LQ6UX01 489 aa20.69■□□□□ 0.9
PTPRO-209ENST00000543886 KIF6Q6ZMV9 814 aa20.69■□□□□ 0.9
PTPRO-209ENST00000543886 TLR7Q9NYK1 1049 aaKnown RBP20.69■□□□□ 0.9
PTPRO-209ENST00000543886 CHMP3Q9Y3E7 222 aa20.69■□□□□ 0.9
PTPRO-209ENST00000543886 RAD50Q92878 1312 aa20.69■□□□□ 0.9
PTPRO-209ENST00000543886 BCL9O00512 1426 aa20.69■□□□□ 0.9
PTPRO-209ENST00000543886 ADAMTS2O95450 1211 aa20.69■□□□□ 0.9
PTPRO-209ENST00000543886 RAB3GAP1Q15042 981 aa20.69■□□□□ 0.9
PTPRO-209ENST00000543886 HSPA4P34932 840 aa20.68■□□□□ 0.9
PTPRO-209ENST00000543886 FOXO4P98177 505 aa20.68■□□□□ 0.9
PTPRO-209ENST00000543886 MCM2P49736 904 aa20.68■□□□□ 0.9
PTPRO-209ENST00000543886 IL17RAQ96F46 866 aa20.68■□□□□ 0.9
PTPRO-209ENST00000543886 CDCA7Q9BWT1 371 aaPredicted RBP20.68■□□□□ 0.9
PTPRO-209ENST00000543886 NRAPQ86VF7 1730 aa20.67■□□□□ 0.9
PTPRO-209ENST00000543886 TFCP2Q12800 502 aa20.67■□□□□ 0.9
PTPRO-209ENST00000543886 TNPO1Q92973 898 aaKnown RBP20.67■□□□□ 0.9
PTPRO-209ENST00000543886 DDX11L8A8MPP1 907 aa20.66■□□□□ 0.9
PTPRO-209ENST00000543886 HIP1O00291 1037 aa20.66■□□□□ 0.9
PTPRO-209ENST00000543886 TNNI3KQ59H18 835 aa20.66■□□□□ 0.9
PTPRO-209ENST00000543886 SYTL4Q96C24 671 aaPredicted RBP20.66■□□□□ 0.9
PTPRO-209ENST00000543886 GBP4Q96PP9 640 aa20.66■□□□□ 0.9
PTPRO-209ENST00000543886 LSG1Q9H089 658 aaKnown RBP20.66■□□□□ 0.9
PTPRO-209ENST00000543886 FPGT-TNNI3KV9GXZ4 949 aa20.66■□□□□ 0.9
PTPRO-209ENST00000543886 TCIRG1Q13488 830 aa20.66■□□□□ 0.9
PTPRO-209ENST00000543886 ISCA1Q9BUE6 129 aa20.65■□□□□ 0.9
PTPRO-209ENST00000543886 DOT1LQ8TEK3 1739 aa20.65■□□□□ 0.9
PTPRO-209ENST00000543886 IL27Q8NEV9 243 aa20.65■□□□□ 0.9
PTPRO-209ENST00000543886 BOLA2Q9H3K6 86 aa20.65■□□□□ 0.9
PTPRO-209ENST00000543886 CWC22Q9HCG8 908 aaKnown RBP20.65■□□□□ 0.9
PTPRO-209ENST00000543886 THRAP3Q9Y2W1 955 aaKnown RBP20.64■□□□□ 0.89
PTPRO-209ENST00000543886 SPATA31A1Q5TZJ5 1347 aa20.64■□□□□ 0.89
PTPRO-209ENST00000543886 ARXQ96QS3 562 aa20.63■□□□□ 0.89
PTPRO-209ENST00000543886 FSD1Q9BTV5 496 aa20.63■□□□□ 0.89
PTPRO-209ENST00000543886 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.63■□□□□ 0.89
PTPRO-209ENST00000543886 KAT6BQ8WYB5 2073 aa20.63■□□□□ 0.89
PTPRO-209ENST00000543886 DBNLQ9UJU6 430 aaKnown RBP20.63■□□□□ 0.89
PTPRO-209ENST00000543886 MAP3K15Q6ZN16 1313 aa20.62■□□□□ 0.89
PTPRO-209ENST00000543886 NUTM2BA6NNL0 878 aaPredicted RBP20.62■□□□□ 0.89
PTPRO-209ENST00000543886 NUTM2EB1AL46 878 aaPredicted RBP20.62■□□□□ 0.89
PTPRO-209ENST00000543886 ATP5JP18859 108 aa20.62■□□□□ 0.89
PTPRO-209ENST00000543886 NUCB2P80303 420 aa20.62■□□□□ 0.89
PTPRO-209ENST00000543886 TRIM28Q13263 835 aaKnown RBP20.62■□□□□ 0.89
PTPRO-209ENST00000543886 DDB1Q16531 1140 aa20.62■□□□□ 0.89
PTPRO-209ENST00000543886 NUTM2AQ8IVF1 878 aaPredicted RBP20.62■□□□□ 0.89
PTPRO-209ENST00000543886 CYP19A1P11511 503 aaPredicted RBP20.61■□□□□ 0.89
PTPRO-209ENST00000543886 PRIM1P49642 420 aaKnown RBP20.61■□□□□ 0.89
PTPRO-209ENST00000543886 TMX3Q96JJ7 454 aa20.61■□□□□ 0.89
PTPRO-209ENST00000543886 UPF3BQ9BZI7 483 aaKnown RBP20.61■□□□□ 0.89
PTPRO-209ENST00000543886 SSFA2P28290 1259 aa20.6■□□□□ 0.89
PTPRO-209ENST00000543886 SNX14Q9Y5W7 946 aa20.6■□□□□ 0.89
PTPRO-209ENST00000543886 TOM1O60784 492 aa20.6■□□□□ 0.89
PTPRO-209ENST00000543886 IL15P40933 162 aaPredicted RBP20.6■□□□□ 0.89
PTPRO-209ENST00000543886 PIP4K2BP78356 416 aa20.6■□□□□ 0.89
PTPRO-209ENST00000543886 NMIQ13287 307 aaPredicted RBP20.6■□□□□ 0.89
PTPRO-209ENST00000543886 SLC4A9Q96Q91 983 aa20.59■□□□□ 0.89
PTPRO-209ENST00000543886 NWD2Q9ULI1 1742 aa20.59■□□□□ 0.89
PTPRO-209ENST00000543886 PCCAP05165 728 aaPredicted RBP20.58■□□□□ 0.89
PTPRO-209ENST00000543886 HSP90AB3PQ58FF7 597 aa20.58■□□□□ 0.89
PTPRO-209ENST00000543886 GIGYF2Q6Y7W6 1299 aaKnown RBP20.58■□□□□ 0.89
PTPRO-209ENST00000543886 ATG9AQ7Z3C6 839 aa20.58■□□□□ 0.89
PTPRO-209ENST00000543886 ZGPATQ8N5A5 531 aaKnown RBP20.58■□□□□ 0.89
PTPRO-209ENST00000543886 FAM227BQ96M60 508 aa20.58■□□□□ 0.89
PTPRO-209ENST00000543886 DBNDD2Q9BQY9 259 aa20.58■□□□□ 0.89
PTPRO-209ENST00000543886 PTMSP20962 102 aa20.58■□□□□ 0.88
PTPRO-209ENST00000543886 NOL8Q76FK4 1167 aaKnown RBP20.58■□□□□ 0.88
PTPRO-209ENST00000543886 CCDC171Q6TFL3 1326 aa20.58■□□□□ 0.88
PTPRO-209ENST00000543886 A0A0G2JS52 829 aa20.57■□□□□ 0.88
PTPRO-209ENST00000543886 EYA2O00167 538 aa20.57■□□□□ 0.88
PTPRO-209ENST00000543886 TRAK2O60296 914 aa20.57■□□□□ 0.88
PTPRO-209ENST00000543886 CIAO1O76071 339 aa20.57■□□□□ 0.88
PTPRO-209ENST00000543886 PTH1RQ03431 593 aa20.57■□□□□ 0.88
PTPRO-209ENST00000543886 ZBTB38Q8NAP3 1195 aaPredicted RBP20.57■□□□□ 0.88
PTPRO-209ENST00000543886 GPR108Q9NPR9 543 aa20.57■□□□□ 0.88
PTPRO-209ENST00000543886 CCDC9Q9Y3X0 531 aaKnown RBP20.57■□□□□ 0.88
PTPRO-209ENST00000543886 ANKRD36CQ5JPF3 1778 aa20.57■□□□□ 0.88
PTPRO-209ENST00000543886 CCDC57Q2TAC2 916 aa20.57■□□□□ 0.88
PTPRO-209ENST00000543886 ZBTB1Q9Y2K1 713 aa20.57■□□□□ 0.88
PTPRO-209ENST00000543886 SPATA31A5Q5VU36 1347 aa20.56■□□□□ 0.88
PTPRO-209ENST00000543886 SPATA31A7Q8IWB4 1347 aa20.56■□□□□ 0.88
PTPRO-209ENST00000543886 RASEFQ8IZ41 740 aa20.56■□□□□ 0.88
PTPRO-209ENST00000543886 ZNF594Q96JF6 807 aaPredicted RBP20.56■□□□□ 0.88
PTPRO-209ENST00000543886 CUL4AQ13619 759 aa20.55■□□□□ 0.88
PTPRO-209ENST00000543886 FAM89AQ96GI7 184 aa20.55■□□□□ 0.88
PTPRO-209ENST00000543886 NEUROD6Q96NK8 337 aa20.55■□□□□ 0.88
PTPRO-209ENST00000543886 HAUS7Q99871 368 aa20.55■□□□□ 0.88
PTPRO-209ENST00000543886 SNRKQ9NRH2 765 aa20.55■□□□□ 0.88
PTPRO-209ENST00000543886 RFX7Q2KHR2 1363 aa20.55■□□□□ 0.88
PTPRO-209ENST00000543886 A0A0D9SFI3 127 aa20.55■□□□□ 0.88
PTPRO-209ENST00000543886 GOLGA6L22H0YM25 854 aa20.55■□□□□ 0.88
PTPRO-209ENST00000543886 KCNJ4P48050 445 aa20.55■□□□□ 0.88
PTPRO-209ENST00000543886 HLFQ16534 295 aa20.55■□□□□ 0.88
PTPRO-209ENST00000543886 PRPF40BQ6NWY9 871 aaKnown RBP20.55■□□□□ 0.88
PTPRO-209ENST00000543886 CLEC17AQ6ZS10 378 aa20.55■□□□□ 0.88
PTPRO-209ENST00000543886 DNAJC2Q99543 621 aaKnown RBP20.55■□□□□ 0.88
PTPRO-209ENST00000543886 PLA2G12BQ9BX93 195 aa20.55■□□□□ 0.88
PTPRO-209ENST00000543886 GPTP24298 496 aa20.54■□□□□ 0.88
PTPRO-209ENST00000543886 LRRC24Q50LG9 513 aa20.54■□□□□ 0.88
PTPRO-209ENST00000543886 EDC3Q96F86 508 aaKnown RBP20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms