RNA–Protein interactions for RNA: ENST00000543695.5

LDHA-222, Transcript of lactate dehydrogenase A, human

TSL 5

Gene LDHA, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LDHA-222	ENST00000543695	ERC2	O15083	957 aa		13.79	□□□□□ -0.2
LDHA-222	ENST00000543695	MX1	P20591	662 aa		13.79	□□□□□ -0.2
LDHA-222	ENST00000543695	ATP6V1A	P38606	617 aa		13.79	□□□□□ -0.2
LDHA-222	ENST00000543695	MTX1	Q13505	466 aa		13.79	□□□□□ -0.2
LDHA-222	ENST00000543695	HSP90AB4P	Q58FF6	505 aa		13.79	□□□□□ -0.2
LDHA-222	ENST00000543695	KSR2	Q6VAB6	950 aa		13.79	□□□□□ -0.2
LDHA-222	ENST00000543695	PPP1R42	Q7Z4L9	355 aa		13.79	□□□□□ -0.2
LDHA-222	ENST00000543695	PI4KAP1	Q8N8J0	262 aa		13.79	□□□□□ -0.2
LDHA-222	ENST00000543695	SLC52A2	Q9HAB3	445 aa		13.79	□□□□□ -0.2
LDHA-222	ENST00000543695	DDX58	O95786	925 aa	Known RBP	13.78	□□□□□ -0.2
LDHA-222	ENST00000543695	MSL1	Q68DK7	614 aa		13.78	□□□□□ -0.2
LDHA-222	ENST00000543695	DDX21	Q9NR30	783 aa	Known RBP eCLIP	13.78	□□□□□ -0.2
LDHA-222	ENST00000543695	ATG3	Q9NT62	314 aa		13.78	□□□□□ -0.2
LDHA-222	ENST00000543695	LY75	O60449	1722 aa		13.78	□□□□□ -0.2
LDHA-222	ENST00000543695	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	13.77	□□□□□ -0.21
LDHA-222	ENST00000543695	CABP4	P57796	275 aa		13.77	□□□□□ -0.21
LDHA-222	ENST00000543695	UTY	O14607	1347 aa		13.76	□□□□□ -0.21
LDHA-222	ENST00000543695	EPB41L2	O43491	1005 aa	Known RBP	13.76	□□□□□ -0.21
LDHA-222	ENST00000543695	PHF14	O94880	888 aa		13.76	□□□□□ -0.21
LDHA-222	ENST00000543695	SSFA2	P28290	1259 aa		13.76	□□□□□ -0.21
LDHA-222	ENST00000543695	ZNF790	Q6PG37	636 aa		13.76	□□□□□ -0.21
LDHA-222	ENST00000543695	SPRYD3	Q8NCJ5	442 aa		13.76	□□□□□ -0.21
LDHA-222	ENST00000543695	LINC00116	Q8NCU8	138 aa		13.76	□□□□□ -0.21
LDHA-222	ENST00000543695	KIF1BP	Q96EK5	621 aa		13.76	□□□□□ -0.21
LDHA-222	ENST00000543695	MAP3K2	Q9Y2U5	619 aa		13.76	□□□□□ -0.21
LDHA-222	ENST00000543695	USP42	Q9H9J4	1324 aa	Known RBP	13.75	□□□□□ -0.21
LDHA-222	ENST00000543695	SURF6	O75683	361 aa	Known RBP	13.75	□□□□□ -0.21
LDHA-222	ENST00000543695	ANXA1	P04083	346 aa		13.75	□□□□□ -0.21
LDHA-222	ENST00000543695	NBPF7	P0C2Y1	421 aa	Predicted RBP	13.75	□□□□□ -0.21
LDHA-222	ENST00000543695	MCM4	P33991	863 aa		13.75	□□□□□ -0.21
LDHA-222	ENST00000543695	ITPK1	Q13572	414 aa		13.75	□□□□□ -0.21
LDHA-222	ENST00000543695	LINS1	Q8NG48	757 aa		13.75	□□□□□ -0.21
LDHA-222	ENST00000543695	RHPN1	Q8TCX5	695 aa		13.75	□□□□□ -0.21
LDHA-222	ENST00000543695	RBM42	Q9BTD8	480 aa	Known RBP	13.75	□□□□□ -0.21
LDHA-222	ENST00000543695	GNPAT	O15228	680 aa		13.74	□□□□□ -0.21
LDHA-222	ENST00000543695	SRGAP3	O43295	1099 aa		13.74	□□□□□ -0.21
LDHA-222	ENST00000543695	PDIA6	Q15084	440 aa		13.74	□□□□□ -0.21
LDHA-222	ENST00000543695	PROSER3	Q2NL68	480 aa		13.74	□□□□□ -0.21
LDHA-222	ENST00000543695	IL27	Q8NEV9	243 aa		13.74	□□□□□ -0.21
LDHA-222	ENST00000543695	ESYT1	Q9BSJ8	1104 aa		13.74	□□□□□ -0.21
LDHA-222	ENST00000543695	CD2AP	Q9Y5K6	639 aa		13.74	□□□□□ -0.21
LDHA-222	ENST00000543695	UTRN	P46939	3433 aa		13.73	□□□□□ -0.21
LDHA-222	ENST00000543695	CD2BP2	O95400	341 aa	Known RBP	13.73	□□□□□ -0.21
LDHA-222	ENST00000543695	CHML	P26374	656 aa		13.73	□□□□□ -0.21
LDHA-222	ENST00000543695	SMIM5	Q71RC9	77 aa		13.73	□□□□□ -0.21
LDHA-222	ENST00000543695	AMIGO3	Q86WK7	504 aa		13.73	□□□□□ -0.21
LDHA-222	ENST00000543695	ERC1	Q8IUD2	1116 aa		13.73	□□□□□ -0.21
LDHA-222	ENST00000543695	NFATC2IP	Q8NCF5	419 aa		13.73	□□□□□ -0.21
LDHA-222	ENST00000543695	NLGN2	Q8NFZ4	835 aa		13.73	□□□□□ -0.21
LDHA-222	ENST00000543695	IL17RA	Q96F46	866 aa		13.73	□□□□□ -0.21
LDHA-222	ENST00000543695	BCL11A	Q9H165	835 aa		13.73	□□□□□ -0.21
LDHA-222	ENST00000543695	C9orf78	Q9NZ63	289 aa	Predicted RBP	13.73	□□□□□ -0.21
LDHA-222	ENST00000543695	RTCB	Q9Y3I0	505 aa	Known RBP	13.73	□□□□□ -0.21
LDHA-222	ENST00000543695	QSER1	Q2KHR3	1735 aa		13.73	□□□□□ -0.21
LDHA-222	ENST00000543695	TTC41P	Q6P2S7	1318 aa		13.72	□□□□□ -0.21
LDHA-222	ENST00000543695	PRAMEF22	A3QJZ6	481 aa		13.72	□□□□□ -0.21
LDHA-222	ENST00000543695	GRIN3B	O60391	1043 aa		13.72	□□□□□ -0.21
LDHA-222	ENST00000543695	PTMS	P20962	102 aa		13.72	□□□□□ -0.21
LDHA-222	ENST00000543695	MCC	P23508	829 aa		13.72	□□□□□ -0.21
LDHA-222	ENST00000543695	RAB3GAP1	Q15042	981 aa		13.72	□□□□□ -0.21
LDHA-222	ENST00000543695	TRAPPC3L	Q5T215	181 aa		13.72	□□□□□ -0.21
LDHA-222	ENST00000543695	RC3H1	Q5TC82	1133 aa	Known RBP	13.72	□□□□□ -0.21
LDHA-222	ENST00000543695	DDX11L8	A8MPP1	907 aa		13.71	□□□□□ -0.21
LDHA-222	ENST00000543695	GRM8	O00222	908 aa		13.71	□□□□□ -0.21
LDHA-222	ENST00000543695	ST18	O60284	1047 aa		13.71	□□□□□ -0.21
LDHA-222	ENST00000543695	PTCD1	O75127	700 aa	Known RBP	13.71	□□□□□ -0.21
LDHA-222	ENST00000543695	HSP90AA1	P07900	732 aa	Known RBP	13.71	□□□□□ -0.21
LDHA-222	ENST00000543695	SNRPA1	P09661	255 aa	Known RBP	13.71	□□□□□ -0.21
LDHA-222	ENST00000543695	ANAPC15	P60006	121 aa		13.71	□□□□□ -0.21
LDHA-222	ENST00000543695	ZNF784	Q8NCA9	323 aa	Predicted RBP	13.71	□□□□□ -0.21
LDHA-222	ENST00000543695	COL15A1	P39059	1388 aa		13.71	□□□□□ -0.22
LDHA-222	ENST00000543695	TJP1	Q07157	1748 aa		13.7	□□□□□ -0.22
LDHA-222	ENST00000543695	TOGARAM1	Q9Y4F4	1720 aa		13.7	□□□□□ -0.22
LDHA-222	ENST00000543695	ERBB4	Q15303	1308 aa		13.7	□□□□□ -0.22
LDHA-222	ENST00000543695	ITGB4	P16144	1822 aa		13.7	□□□□□ -0.22
LDHA-222	ENST00000543695	TRIM6-TRIM34	B2RNG4	842 aa		13.7	□□□□□ -0.22
LDHA-222	ENST00000543695	SLC39A6	Q13433	755 aa		13.7	□□□□□ -0.22
LDHA-222	ENST00000543695	TTC5	Q8N0Z6	440 aa		13.7	□□□□□ -0.22
LDHA-222	ENST00000543695	PI4K2B	Q8TCG2	481 aa		13.7	□□□□□ -0.22
LDHA-222	ENST00000543695	RILPL2	Q969X0	211 aa		13.7	□□□□□ -0.22
LDHA-222	ENST00000543695	FMNL2	Q96PY5	1086 aa		13.7	□□□□□ -0.22
LDHA-222	ENST00000543695	SLC4A9	Q96Q91	983 aa		13.7	□□□□□ -0.22
LDHA-222	ENST00000543695	IL1RAPL2	Q9NP60	686 aa		13.7	□□□□□ -0.22
LDHA-222	ENST00000543695	NEXN	Q0ZGT2	675 aa		13.69	□□□□□ -0.22
LDHA-222	ENST00000543695	TSHZ3	Q63HK5	1081 aa		13.69	□□□□□ -0.22
LDHA-222	ENST00000543695	RIC3	Q7Z5B4	369 aa		13.69	□□□□□ -0.22
LDHA-222	ENST00000543695	NUTM1	Q86Y26	1132 aa		13.69	□□□□□ -0.22
LDHA-222	ENST00000543695	NLGN1	Q8N2Q7	840 aa		13.69	□□□□□ -0.22
LDHA-222	ENST00000543695	ZNF496	Q96IT1	587 aa	Predicted RBP	13.69	□□□□□ -0.22
LDHA-222	ENST00000543695	GBP4	Q96PP9	640 aa		13.69	□□□□□ -0.22
LDHA-222	ENST00000543695	METTL22	Q9BUU2	404 aa	Predicted RBP	13.69	□□□□□ -0.22
LDHA-222	ENST00000543695	C4B	P0C0L5	1744 aa		13.69	□□□□□ -0.22
LDHA-222	ENST00000543695	KCP	Q6ZWJ8	1503 aa		13.69	□□□□□ -0.22
LDHA-222	ENST00000543695	RPS6KA4	O75676	772 aa		13.68	□□□□□ -0.22
LDHA-222	ENST00000543695	GLRX3	O76003	335 aa	Known RBP	13.68	□□□□□ -0.22
LDHA-222	ENST00000543695	RFC4	P35249	363 aa		13.68	□□□□□ -0.22
LDHA-222	ENST00000543695	MCM2	P49736	904 aa		13.68	□□□□□ -0.22
LDHA-222	ENST00000543695	OS9	Q13438	667 aa	Predicted RBP	13.68	□□□□□ -0.22
LDHA-222	ENST00000543695	CWF19L2	Q2TBE0	894 aa	Known RBP	13.68	□□□□□ -0.22
LDHA-222	ENST00000543695	CLEC17A	Q6ZS10	378 aa		13.68	□□□□□ -0.22

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