RNA–Protein interactions for RNA: ENST00000543415.5

GTF2H3-213, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 5

Gene GTF2H3, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-213ENST00000543415 SEC13P55735 322 aa6.33□□□□□ -1.4
GTF2H3-213ENST00000543415 PSMA6P60900 246 aaKnown RBP6.33□□□□□ -1.4
GTF2H3-213ENST00000543415 NEUROD1Q13562 356 aa6.33□□□□□ -1.4
GTF2H3-213ENST00000543415 C1orf53Q5VUE5 145 aa6.33□□□□□ -1.4
GTF2H3-213ENST00000543415 LARP1Q6PKG0 1096 aaKnown RBP6.33□□□□□ -1.4
GTF2H3-213ENST00000543415 POTEAQ6S8J7 498 aa6.33□□□□□ -1.4
GTF2H3-213ENST00000543415 SYT9Q86SS6 491 aa6.33□□□□□ -1.4
GTF2H3-213ENST00000543415 GAS2L2Q8NHY3 880 aa6.33□□□□□ -1.4
GTF2H3-213ENST00000543415 C7orf43Q8WVR3 580 aa6.33□□□□□ -1.4
GTF2H3-213ENST00000543415 PLVAPQ9BX97 442 aa6.33□□□□□ -1.4
GTF2H3-213ENST00000543415 VRTNQ9H8Y1 702 aa6.33□□□□□ -1.4
GTF2H3-213ENST00000543415 ANKIB1Q9P2G1 1089 aa6.33□□□□□ -1.4
GTF2H3-213ENST00000543415 CARNS1A5YM72 827 aa6.32□□□□□ -1.4
GTF2H3-213ENST00000543415 ADARB2-AS1A8MUL3 147 aa6.32□□□□□ -1.4
GTF2H3-213ENST00000543415 HIRAP54198 1017 aaPredicted RBP6.32□□□□□ -1.4
GTF2H3-213ENST00000543415 SRPK2P78362 688 aaKnown RBP6.32□□□□□ -1.4
GTF2H3-213ENST00000543415 ANKMY2Q8IV38 441 aa6.32□□□□□ -1.4
GTF2H3-213ENST00000543415 RHPN1Q8TCX5 695 aa6.32□□□□□ -1.4
GTF2H3-213ENST00000543415 GZF1Q9H116 711 aaPredicted RBP6.32□□□□□ -1.4
GTF2H3-213ENST00000543415 RBM19Q9Y4C8 960 aaKnown RBP6.32□□□□□ -1.4
GTF2H3-213ENST00000543415 ATG7O95352 703 aa6.31□□□□□ -1.4
GTF2H3-213ENST00000543415 CHRNA4P43681 627 aa6.31□□□□□ -1.4
GTF2H3-213ENST00000543415 TMCO4Q5TGY1 634 aa6.31□□□□□ -1.4
GTF2H3-213ENST00000543415 TRIM11Q96F44 468 aa6.31□□□□□ -1.4
GTF2H3-213ENST00000543415 MDFIQ99750 246 aa6.31□□□□□ -1.4
GTF2H3-213ENST00000543415 PPP1R12BO60237 982 aaPredicted RBP6.3□□□□□ -1.4
GTF2H3-213ENST00000543415 BRD1O95696 1058 aa6.3□□□□□ -1.4
GTF2H3-213ENST00000543415 PRRT3Q5FWE3 981 aa6.3□□□□□ -1.4
GTF2H3-213ENST00000543415 SCG3Q8WXD2 468 aaKnown RBP6.3□□□□□ -1.4
GTF2H3-213ENST00000543415 TNFRSF25Q93038 417 aa6.3□□□□□ -1.4
GTF2H3-213ENST00000543415 PRDM6Q9NQX0 595 aa6.3□□□□□ -1.4
GTF2H3-213ENST00000543415 ZMIZ1Q9ULJ6 1067 aa6.3□□□□□ -1.4
GTF2H3-213ENST00000543415 HMGB1P09429 215 aaKnown RBP6.29□□□□□ -1.4
GTF2H3-213ENST00000543415 GATA4P43694 442 aa6.29□□□□□ -1.4
GTF2H3-213ENST00000543415 KCNQ4P56696 695 aa6.29□□□□□ -1.4
GTF2H3-213ENST00000543415 KCNA1Q09470 495 aa6.29□□□□□ -1.4
GTF2H3-213ENST00000543415 SPEM2Q0P670 501 aa6.29□□□□□ -1.4
GTF2H3-213ENST00000543415 SFSWAPQ12872 951 aaKnown RBP6.29□□□□□ -1.4
GTF2H3-213ENST00000543415 HIF1AQ16665 826 aa6.29□□□□□ -1.4
GTF2H3-213ENST00000543415 XP32Q5T750 250 aa6.29□□□□□ -1.4
GTF2H3-213ENST00000543415 CEP63Q96MT8 703 aa6.29□□□□□ -1.4
GTF2H3-213ENST00000543415 C2orf49Q9BVC5 232 aaPredicted RBP6.29□□□□□ -1.4
GTF2H3-213ENST00000543415 BRD7Q9NPI1 651 aa6.29□□□□□ -1.4
GTF2H3-213ENST00000543415 HCN4Q9Y3Q4 1203 aa6.29□□□□□ -1.4
GTF2H3-213ENST00000543415 ATAD2Q6PL18 1390 aa6.29□□□□□ -1.4
GTF2H3-213ENST00000543415 SLC30A3Q99726 388 aa6.28□□□□□ -1.4
GTF2H3-213ENST00000543415 HINFPQ9BQA5 517 aa6.28□□□□□ -1.4
GTF2H3-213ENST00000543415 PHACTR1Q9C0D0 580 aa6.28□□□□□ -1.4
GTF2H3-213ENST00000543415 NOVA2Q9UNW9 492 aaKnown RBP6.28□□□□□ -1.4
GTF2H3-213ENST00000543415 M0R082 166 aa6.27□□□□□ -1.41
GTF2H3-213ENST00000543415 APBA3O96018 575 aa6.27□□□□□ -1.41
GTF2H3-213ENST00000543415 STAG2Q8N3U4 1231 aa6.27□□□□□ -1.41
GTF2H3-213ENST00000543415 ZNF417Q8TAU3 575 aa6.27□□□□□ -1.41
GTF2H3-213ENST00000543415 STK32AQ8WU08 396 aa6.27□□□□□ -1.41
GTF2H3-213ENST00000543415 CHMP7Q8WUX9 453 aaPredicted RBP6.27□□□□□ -1.41
GTF2H3-213ENST00000543415 HSH2DQ96JZ2 352 aa6.27□□□□□ -1.41
GTF2H3-213ENST00000543415 ZNF587Q96SQ5 575 aaPredicted RBP6.27□□□□□ -1.41
GTF2H3-213ENST00000543415 EFCC1Q9HA90 598 aa6.27□□□□□ -1.41
GTF2H3-213ENST00000543415 KCNH4Q9UQ05 1017 aa6.27□□□□□ -1.41
GTF2H3-213ENST00000543415 WEE1P30291 646 aa6.26□□□□□ -1.41
GTF2H3-213ENST00000543415 ADH7P40394 386 aa6.26□□□□□ -1.41
GTF2H3-213ENST00000543415 ALDH16A1Q8IZ83 802 aa6.26□□□□□ -1.41
GTF2H3-213ENST00000543415 ZNF280CQ8ND82 737 aa6.26□□□□□ -1.41
GTF2H3-213ENST00000543415 SUSD3Q96L08 255 aa6.26□□□□□ -1.41
GTF2H3-213ENST00000543415 NACC1Q96RE7 527 aa6.26□□□□□ -1.41
GTF2H3-213ENST00000543415 TMEM88BA6NKF7 163 aa6.25□□□□□ -1.41
GTF2H3-213ENST00000543415 IGFBP4P22692 258 aa6.25□□□□□ -1.41
GTF2H3-213ENST00000543415 TYRO3Q06418 890 aa6.25□□□□□ -1.41
GTF2H3-213ENST00000543415 FAM69CQ0P6D2 419 aa6.25□□□□□ -1.41
GTF2H3-213ENST00000543415 TRIM28Q13263 835 aaKnown RBP6.25□□□□□ -1.41
GTF2H3-213ENST00000543415 DOC2BQ14184 412 aa6.25□□□□□ -1.41
GTF2H3-213ENST00000543415 B4GALNT3Q6L9W6 998 aa6.25□□□□□ -1.41
GTF2H3-213ENST00000543415 MICALL1Q8N3F8 863 aa6.25□□□□□ -1.41
GTF2H3-213ENST00000543415 Q8N3U1 123 aa6.25□□□□□ -1.41
GTF2H3-213ENST00000543415 FAM200AQ8TCP9 573 aa6.25□□□□□ -1.41
GTF2H3-213ENST00000543415 NGLY1Q96IV0 654 aa6.25□□□□□ -1.41
GTF2H3-213ENST00000543415 STARD13Q9Y3M8 1113 aa6.25□□□□□ -1.41
GTF2H3-213ENST00000543415 IVNS1ABPQ9Y6Y0 642 aa6.25□□□□□ -1.41
GTF2H3-213ENST00000543415 ALBP02768 609 aa6.24□□□□□ -1.41
GTF2H3-213ENST00000543415 ELOAQ14241 798 aaKnown RBP6.24□□□□□ -1.41
GTF2H3-213ENST00000543415 TMEM164Q5U3C3 297 aa6.24□□□□□ -1.41
GTF2H3-213ENST00000543415 SEMA6BQ9H3T3 888 aa6.24□□□□□ -1.41
GTF2H3-213ENST00000543415 MFAP1P55081 439 aaKnown RBP6.23□□□□□ -1.41
GTF2H3-213ENST00000543415 COL9A3Q14050 684 aaPredicted RBP6.23□□□□□ -1.41
GTF2H3-213ENST00000543415 BTLAQ7Z6A9 289 aa6.23□□□□□ -1.41
GTF2H3-213ENST00000543415 BCS1LQ9Y276 419 aa6.23□□□□□ -1.41
GTF2H3-213ENST00000543415 LILRB5O75023 590 aa6.22□□□□□ -1.41
GTF2H3-213ENST00000543415 NID1P14543 1247 aa6.22□□□□□ -1.41
GTF2H3-213ENST00000543415 FKBP5Q13451 457 aaPredicted RBP6.22□□□□□ -1.41
GTF2H3-213ENST00000543415 OCLNQ16625 522 aa6.22□□□□□ -1.41
GTF2H3-213ENST00000543415 IER5Q5VY09 327 aa6.22□□□□□ -1.41
GTF2H3-213ENST00000543415 C20orf204Q6ZNR8 217 aa6.22□□□□□ -1.41
GTF2H3-213ENST00000543415 RAB44Q7Z6P3 723 aaPredicted RBP6.22□□□□□ -1.41
GTF2H3-213ENST00000543415 BHMTQ93088 406 aa6.22□□□□□ -1.41
GTF2H3-213ENST00000543415 PRIMPOLQ96LW4 560 aa6.22□□□□□ -1.41
GTF2H3-213ENST00000543415 QTRT2Q9H974 415 aaKnown RBP6.22□□□□□ -1.41
GTF2H3-213ENST00000543415 SLAIN2Q9P270 581 aa6.22□□□□□ -1.41
GTF2H3-213ENST00000543415 PRMT3O60678 531 aa6.21□□□□□ -1.42
GTF2H3-213ENST00000543415 RTN1Q16799 776 aa6.21□□□□□ -1.42
GTF2H3-213ENST00000543415 C9orf172C9J069 976 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms