RNA–Protein interactions for RNA: ENST00000543134.5

SEC23IP-208, Transcript of SEC23 interacting protein, humanhuman

TSL 5 BASIC

Gene SEC23IP, Length 1,461 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23IP-208ENST00000543134 PTPRCP08575 1304 aa9.19□□□□□ -0.94
SEC23IP-208ENST00000543134 KCNQ3O43525 872 aa9.19□□□□□ -0.94
SEC23IP-208ENST00000543134 FTSJ3Q8IY81 847 aaKnown RBP9.19□□□□□ -0.94
SEC23IP-208ENST00000543134 FBXW7Q969H0 707 aa9.19□□□□□ -0.94
SEC23IP-208ENST00000543134 SLC52A2Q9HAB3 445 aa9.19□□□□□ -0.94
SEC23IP-208ENST00000543134 ZBTB40Q9NUA8 1239 aa9.19□□□□□ -0.94
SEC23IP-208ENST00000543134 UBR2Q8IWV8 1755 aa9.18□□□□□ -0.94
SEC23IP-208ENST00000543134 TCERG1O14776 1098 aaKnown RBP9.18□□□□□ -0.94
SEC23IP-208ENST00000543134 ZBTB7BO15156 539 aaPredicted RBP9.18□□□□□ -0.94
SEC23IP-208ENST00000543134 CCDC30Q5VVM6 783 aa9.18□□□□□ -0.94
SEC23IP-208ENST00000543134 INTS3Q68E01 1043 aaKnown RBP9.18□□□□□ -0.94
SEC23IP-208ENST00000543134 CENPQQ7L2Z9 268 aaPredicted RBP9.18□□□□□ -0.94
SEC23IP-208ENST00000543134 LRRC4BQ9NT99 713 aa9.18□□□□□ -0.94
SEC23IP-208ENST00000543134 PCDHB15Q9Y5E8 787 aa9.18□□□□□ -0.94
SEC23IP-208ENST00000543134 ITGB4P16144 1822 aa9.18□□□□□ -0.94
SEC23IP-208ENST00000543134 PCDH11XQ9BZA7 1347 aa9.17□□□□□ -0.94
SEC23IP-208ENST00000543134 PCDH11YQ9BZA8 1340 aa9.17□□□□□ -0.94
SEC23IP-208ENST00000543134 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.17□□□□□ -0.94
SEC23IP-208ENST00000543134 ERVV-2B6SEH9 535 aa9.17□□□□□ -0.94
SEC23IP-208ENST00000543134 IGHDP01880 384 aa9.17□□□□□ -0.94
SEC23IP-208ENST00000543134 CD44P16070 742 aaKnown RBP9.17□□□□□ -0.94
SEC23IP-208ENST00000543134 HMGB2P26583 209 aaKnown RBP9.17□□□□□ -0.94
SEC23IP-208ENST00000543134 FAM177A1Q8N128 213 aaPredicted RBP9.17□□□□□ -0.94
SEC23IP-208ENST00000543134 NFATC2IPQ8NCF5 419 aa9.17□□□□□ -0.94
SEC23IP-208ENST00000543134 ZFP91Q96JP5 570 aaPredicted RBP9.17□□□□□ -0.94
SEC23IP-208ENST00000543134 C5P01031 1676 aa9.17□□□□□ -0.94
SEC23IP-208ENST00000543134 ZNF790Q6PG37 636 aa9.16□□□□□ -0.94
SEC23IP-208ENST00000543134 G2E3Q7L622 706 aa9.16□□□□□ -0.94
SEC23IP-208ENST00000543134 KRI1Q8N9T8 703 aaKnown RBP9.16□□□□□ -0.94
SEC23IP-208ENST00000543134 ZNF579Q8NAF0 562 aaKnown RBP9.16□□□□□ -0.94
SEC23IP-208ENST00000543134 RBM46Q8TBY0 533 aaKnown RBP9.16□□□□□ -0.94
SEC23IP-208ENST00000543134 CHMP4BQ9H444 224 aaKnown RBP9.16□□□□□ -0.94
SEC23IP-208ENST00000543134 TOGARAM1Q9Y4F4 1720 aa9.16□□□□□ -0.94
SEC23IP-208ENST00000543134 PCNTO95613 3336 aa9.16□□□□□ -0.94
SEC23IP-208ENST00000543134 TUBGCP6Q96RT7 1819 aa9.16□□□□□ -0.94
SEC23IP-208ENST00000543134 FSTL1Q12841 308 aa9.15□□□□□ -0.94
SEC23IP-208ENST00000543134 MSL1Q68DK7 614 aa9.15□□□□□ -0.94
SEC23IP-208ENST00000543134 ITPRIPQ8IWB1 547 aa9.15□□□□□ -0.94
SEC23IP-208ENST00000543134 RETREG2Q8NC44 543 aa9.15□□□□□ -0.94
SEC23IP-208ENST00000543134 STK31Q9BXU1 1019 aa9.15□□□□□ -0.94
SEC23IP-208ENST00000543134 PDAP1Q13442 181 aaKnown RBP9.15□□□□□ -0.95
SEC23IP-208ENST00000543134 HDAC1Q13547 482 aaPredicted RBP9.15□□□□□ -0.95
SEC23IP-208ENST00000543134 HDGFL1Q5TGJ6 251 aa9.15□□□□□ -0.95
SEC23IP-208ENST00000543134 UBE2Q2Q8WVN8 375 aa9.15□□□□□ -0.95
SEC23IP-208ENST00000543134 SYTL4Q96C24 671 aaPredicted RBP9.15□□□□□ -0.95
SEC23IP-208ENST00000543134 LAMB4A4D0S4 1761 aa9.14□□□□□ -0.95
SEC23IP-208ENST00000543134 HSPA1AP0DMV8 641 aaKnown RBP9.14□□□□□ -0.95
SEC23IP-208ENST00000543134 HSPA1BP0DMV9 641 aaKnown RBP9.14□□□□□ -0.95
SEC23IP-208ENST00000543134 HTRA3P83110 453 aa9.14□□□□□ -0.95
SEC23IP-208ENST00000543134 PDE4DQ08499 809 aa9.14□□□□□ -0.95
SEC23IP-208ENST00000543134 SMYD5Q6GMV2 418 aa9.14□□□□□ -0.95
SEC23IP-208ENST00000543134 FLAD1Q8NFF5 587 aa9.14□□□□□ -0.95
SEC23IP-208ENST00000543134 CCDC97Q96F63 343 aaPredicted RBP9.14□□□□□ -0.95
SEC23IP-208ENST00000543134 KIF12Q96FN5 646 aa9.14□□□□□ -0.95
SEC23IP-208ENST00000543134 STK24Q9Y6E0 443 aa9.14□□□□□ -0.95
SEC23IP-208ENST00000543134 PXDNLA1KZ92 1463 aa9.13□□□□□ -0.95
SEC23IP-208ENST00000543134 CABP4P57796 275 aa9.13□□□□□ -0.95
SEC23IP-208ENST00000543134 SLC39A6Q13433 755 aa9.13□□□□□ -0.95
SEC23IP-208ENST00000543134 IRF5Q13568 498 aa9.13□□□□□ -0.95
SEC23IP-208ENST00000543134 RWDD1Q9H446 243 aaPredicted RBP9.13□□□□□ -0.95
SEC23IP-208ENST00000543134 SERPINA10Q9UK55 444 aa9.13□□□□□ -0.95
SEC23IP-208ENST00000543134 CCNL1Q9UK58 526 aaPredicted RBP9.13□□□□□ -0.95
SEC23IP-208ENST00000543134 PCDHB13Q9Y5F0 798 aa9.13□□□□□ -0.95
SEC23IP-208ENST00000543134 CCT4P50991 539 aaKnown RBP9.12□□□□□ -0.95
SEC23IP-208ENST00000543134 PDIA6Q15084 440 aa9.12□□□□□ -0.95
SEC23IP-208ENST00000543134 ZNF496Q96IT1 587 aaPredicted RBP9.12□□□□□ -0.95
SEC23IP-208ENST00000543134 FAM117AQ9C073 453 aa9.12□□□□□ -0.95
SEC23IP-208ENST00000543134 PHAXQ9H814 394 aaKnown RBP9.12□□□□□ -0.95
SEC23IP-208ENST00000543134 NMRK2Q9NPI5 230 aa9.12□□□□□ -0.95
SEC23IP-208ENST00000543134 DBF4Q9UBU7 674 aaPredicted RBP9.12□□□□□ -0.95
SEC23IP-208ENST00000543134 PCDHB8Q9UN66 801 aa9.12□□□□□ -0.95
SEC23IP-208ENST00000543134 KCPQ6ZWJ8 1503 aa9.11□□□□□ -0.95
SEC23IP-208ENST00000543134 PRAMEF22A3QJZ6 481 aa9.11□□□□□ -0.95
SEC23IP-208ENST00000543134 C19orf67A6NJJ6 358 aa9.11□□□□□ -0.95
SEC23IP-208ENST00000543134 MAP3K13O43283 966 aa9.11□□□□□ -0.95
SEC23IP-208ENST00000543134 SNRPA1P09661 255 aaKnown RBP9.11□□□□□ -0.95
SEC23IP-208ENST00000543134 EIF2S2P20042 333 aaKnown RBP9.11□□□□□ -0.95
SEC23IP-208ENST00000543134 KCNQ4P56696 695 aa9.11□□□□□ -0.95
SEC23IP-208ENST00000543134 COL23A1Q86Y22 540 aaPredicted RBP9.11□□□□□ -0.95
SEC23IP-208ENST00000543134 SMC5Q8IY18 1101 aa9.11□□□□□ -0.95
SEC23IP-208ENST00000543134 DDX54Q8TDD1 881 aaKnown RBP9.11□□□□□ -0.95
SEC23IP-208ENST00000543134 FMNL2Q96PY5 1086 aa9.11□□□□□ -0.95
SEC23IP-208ENST00000543134 DDX21Q9NR30 783 aaKnown RBP eCLIP9.11□□□□□ -0.95
SEC23IP-208ENST00000543134 CHPF2Q9P2E5 772 aa9.11□□□□□ -0.95
SEC23IP-208ENST00000543134 F6X3S4 739 aa9.1□□□□□ -0.95
SEC23IP-208ENST00000543134 TRIM66O15016 1216 aa9.1□□□□□ -0.95
SEC23IP-208ENST00000543134 LRP10Q7Z4F1 713 aa9.1□□□□□ -0.95
SEC23IP-208ENST00000543134 SIRT2Q8IXJ6 389 aa9.1□□□□□ -0.95
SEC23IP-208ENST00000543134 HYPKQ9NX55 129 aa9.1□□□□□ -0.95
SEC23IP-208ENST00000543134 IBTKQ9P2D0 1353 aaPredicted RBP9.1□□□□□ -0.95
SEC23IP-208ENST00000543134 FKBP5Q13451 457 aaPredicted RBP9.09□□□□□ -0.95
SEC23IP-208ENST00000543134 IFNL1Q8IU54 200 aa9.09□□□□□ -0.95
SEC23IP-208ENST00000543134 TTC5Q8N0Z6 440 aa9.09□□□□□ -0.95
SEC23IP-208ENST00000543134 SMC1BQ8NDV3 1235 aa9.09□□□□□ -0.95
SEC23IP-208ENST00000543134 USP16Q9Y5T5 823 aa9.09□□□□□ -0.95
SEC23IP-208ENST00000543134 PROSER3Q2NL68 480 aa9.08□□□□□ -0.96
SEC23IP-208ENST00000543134 ARHGAP27Q6ZUM4 889 aa9.08□□□□□ -0.96
SEC23IP-208ENST00000543134 RPAP2Q8IXW5 612 aaPredicted RBP9.08□□□□□ -0.96
SEC23IP-208ENST00000543134 ERBB4Q15303 1308 aa9.08□□□□□ -0.96
SEC23IP-208ENST00000543134 LY75O60449 1722 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms