RNA–Protein interactions for RNA: ENST00000543120.5

PTPN6-221, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 4

Gene PTPN6, Length 564 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-221ENST00000543120 NUP98P52948 1817 aa21.52■■□□□ 1.04
PTPN6-221ENST00000543120 SLX4Q8IY92 1834 aa21.52■■□□□ 1.04
PTPN6-221ENST00000543120 HOXA10P31260 410 aaPredicted RBP21.52■■□□□ 1.04
PTPN6-221ENST00000543120 SLC51AQ86UW1 340 aa21.52■■□□□ 1.04
PTPN6-221ENST00000543120 PHAXQ9H814 394 aaKnown RBP21.52■■□□□ 1.04
PTPN6-221ENST00000543120 ALDH1B1P30837 517 aa21.51■■□□□ 1.03
PTPN6-221ENST00000543120 HSP90AB3PQ58FF7 597 aa21.51■■□□□ 1.03
PTPN6-221ENST00000543120 TAOK3Q9H2K8 898 aa21.51■■□□□ 1.03
PTPN6-221ENST00000543120 RRAGCQ9HB90 399 aa21.51■■□□□ 1.03
PTPN6-221ENST00000543120 SOGA3Q5TF21 947 aa21.5■■□□□ 1.03
PTPN6-221ENST00000543120 FAM9BQ8IZU0 186 aa21.5■■□□□ 1.03
PTPN6-221ENST00000543120 LTBP3Q9NS15 1303 aa21.5■■□□□ 1.03
PTPN6-221ENST00000543120 ATP5J2-PTCD1G3V325 749 aa21.49■■□□□ 1.03
PTPN6-221ENST00000543120 HCLS1P14317 486 aaPredicted RBP21.49■■□□□ 1.03
PTPN6-221ENST00000543120 NCBP3Q53F19 620 aaKnown RBP21.49■■□□□ 1.03
PTPN6-221ENST00000543120 RPGRQ92834 1020 aaKnown RBP21.49■■□□□ 1.03
PTPN6-221ENST00000543120 ISCA1Q9BUE6 129 aa21.49■■□□□ 1.03
PTPN6-221ENST00000543120 TNRC6CQ9HCJ0 1690 aaKnown RBP21.49■■□□□ 1.03
PTPN6-221ENST00000543120 SBF1O95248 1867 aa21.48■■□□□ 1.03
PTPN6-221ENST00000543120 GLTPD2A6NH11 291 aa21.48■■□□□ 1.03
PTPN6-221ENST00000543120 CCDC93Q567U6 631 aa21.48■■□□□ 1.03
PTPN6-221ENST00000543120 NLRP3Q96P20 1036 aa21.48■■□□□ 1.03
PTPN6-221ENST00000543120 TRMT112Q9UI30 125 aaKnown RBP21.48■■□□□ 1.03
PTPN6-221ENST00000543120 KDM2BQ8NHM5 1336 aa21.48■■□□□ 1.03
PTPN6-221ENST00000543120 TCERG1O14776 1098 aaKnown RBP21.47■■□□□ 1.03
PTPN6-221ENST00000543120 RBM17Q96I25 401 aaKnown RBP21.47■■□□□ 1.03
PTPN6-221ENST00000543120 ZNF277Q9NRM2 450 aaPredicted RBP21.47■■□□□ 1.03
PTPN6-221ENST00000543120 ZC3H4Q9UPT8 1303 aaKnown RBP21.47■■□□□ 1.03
PTPN6-221ENST00000543120 RIC1Q4ADV7 1423 aa21.46■■□□□ 1.03
PTPN6-221ENST00000543120 RTKN2Q8IZC4 609 aa21.46■■□□□ 1.03
PTPN6-221ENST00000543120 CRAMP1Q96RY5 1269 aa21.46■■□□□ 1.03
PTPN6-221ENST00000543120 IL16Q14005 1332 aa21.46■■□□□ 1.03
PTPN6-221ENST00000543120 TOMM70O94826 608 aa21.45■■□□□ 1.02
PTPN6-221ENST00000543120 FKBP4Q02790 459 aaKnown RBP eCLIP21.45■■□□□ 1.02
PTPN6-221ENST00000543120 CCDC30Q5VVM6 783 aa21.45■■□□□ 1.02
PTPN6-221ENST00000543120 SPINK5Q9NQ38 1064 aaPredicted RBP21.45■■□□□ 1.02
PTPN6-221ENST00000543120 POTECB2RU33 542 aa21.44■■□□□ 1.02
PTPN6-221ENST00000543120 RIC3Q7Z5B4 369 aa21.44■■□□□ 1.02
PTPN6-221ENST00000543120 WDR63Q8IWG1 891 aa21.44■■□□□ 1.02
PTPN6-221ENST00000543120 FAM89AQ96GI7 184 aa21.44■■□□□ 1.02
PTPN6-221ENST00000543120 SH3TC1Q8TE82 1336 aa21.44■■□□□ 1.02
PTPN6-221ENST00000543120 TRIM28Q13263 835 aaKnown RBP21.43■■□□□ 1.02
PTPN6-221ENST00000543120 RNF123Q5XPI4 1314 aa21.43■■□□□ 1.02
PTPN6-221ENST00000543120 GOLGA2Q08379 1002 aa21.42■■□□□ 1.02
PTPN6-221ENST00000543120 FER1L6Q2WGJ9 1857 aa21.42■■□□□ 1.02
PTPN6-221ENST00000543120 TWISTNBQ3B726 338 aaPredicted RBP21.42■■□□□ 1.02
PTPN6-221ENST00000543120 RTL5Q5HYW3 569 aaPredicted RBP21.42■■□□□ 1.02
PTPN6-221ENST00000543120 SNED1Q8TER0 1413 aa21.42■■□□□ 1.02
PTPN6-221ENST00000543120 ABCC4O15439 1325 aa21.41■■□□□ 1.02
PTPN6-221ENST00000543120 FANCIQ9NVI1 1328 aa21.41■■□□□ 1.02
PTPN6-221ENST00000543120 PPEF1O14829 653 aaPredicted RBP21.41■■□□□ 1.02
PTPN6-221ENST00000543120 MYD88Q99836 296 aa21.41■■□□□ 1.02
PTPN6-221ENST00000543120 DDNO94850 711 aaPredicted RBP21.4■■□□□ 1.02
PTPN6-221ENST00000543120 HSPA6P17066 643 aa21.4■■□□□ 1.02
PTPN6-221ENST00000543120 DPY19L2Q6NUT2 758 aa21.4■■□□□ 1.02
PTPN6-221ENST00000543120 G2E3Q7L622 706 aa21.4■■□□□ 1.02
PTPN6-221ENST00000543120 VEGFAP15692 232 aaPredicted RBP21.39■■□□□ 1.01
PTPN6-221ENST00000543120 CC2D2BQ6DHV5 1058 aa21.39■■□□□ 1.01
PTPN6-221ENST00000543120 RBM46Q8TBY0 533 aaKnown RBP21.39■■□□□ 1.01
PTPN6-221ENST00000543120 PSMD1Q99460 953 aa21.39■■□□□ 1.01
PTPN6-221ENST00000543120 ATP6V0A2Q9Y487 856 aa21.39■■□□□ 1.01
PTPN6-221ENST00000543120 ARFGEF2Q9Y6D5 1785 aa21.38■■□□□ 1.01
PTPN6-221ENST00000543120 VAMP4O75379 141 aa21.38■■□□□ 1.01
PTPN6-221ENST00000543120 IARSP41252 1262 aaKnown RBP21.38■■□□□ 1.01
PTPN6-221ENST00000543120 C16orf71Q8IYS4 520 aaPredicted RBP21.38■■□□□ 1.01
PTPN6-221ENST00000543120 JARID2Q92833 1246 aaPredicted RBP21.38■■□□□ 1.01
PTPN6-221ENST00000543120 METTL22Q9BUU2 404 aaPredicted RBP21.38■■□□□ 1.01
PTPN6-221ENST00000543120 CHMP4AQ9BY43 222 aa21.38■■□□□ 1.01
PTPN6-221ENST00000543120 MAP3K2Q9Y2U5 619 aa21.38■■□□□ 1.01
PTPN6-221ENST00000543120 CACNA1SQ13698 1873 aa21.37■■□□□ 1.01
PTPN6-221ENST00000543120 BBOX1O75936 387 aa21.37■■□□□ 1.01
PTPN6-221ENST00000543120 SLC4A2P04920 1241 aa21.37■■□□□ 1.01
PTPN6-221ENST00000543120 EXOSC9Q06265 439 aaKnown RBP21.37■■□□□ 1.01
PTPN6-221ENST00000543120 ZNF541Q9H0D2 1346 aa21.36■■□□□ 1.01
PTPN6-221ENST00000543120 PI4KAP2A4QPH2 592 aa21.36■■□□□ 1.01
PTPN6-221ENST00000543120 IRS4O14654 1257 aaPredicted RBP21.36■■□□□ 1.01
PTPN6-221ENST00000543120 SF3B3Q15393 1217 aaKnown RBP21.36■■□□□ 1.01
PTPN6-221ENST00000543120 KSR2Q6VAB6 950 aa21.36■■□□□ 1.01
PTPN6-221ENST00000543120 DDX46Q7L014 1031 aaKnown RBP21.36■■□□□ 1.01
PTPN6-221ENST00000543120 PI4KAP1Q8N8J0 262 aa21.36■■□□□ 1.01
PTPN6-221ENST00000543120 ZBTB38Q8NAP3 1195 aaPredicted RBP21.36■■□□□ 1.01
PTPN6-221ENST00000543120 STK31Q9BXU1 1019 aa21.36■■□□□ 1.01
PTPN6-221ENST00000543120 FZD9O00144 591 aa21.35■■□□□ 1.01
PTPN6-221ENST00000543120 DDX58O95786 925 aaKnown RBP21.35■■□□□ 1.01
PTPN6-221ENST00000543120 GRAPQ13588 217 aa21.35■■□□□ 1.01
PTPN6-221ENST00000543120 SP8Q8IXZ3 490 aa21.35■■□□□ 1.01
PTPN6-221ENST00000543120 GRAPLQ8TC17 118 aaPredicted RBP21.35■■□□□ 1.01
PTPN6-221ENST00000543120 CCDC88AQ3V6T2 1871 aa21.35■■□□□ 1.01
PTPN6-221ENST00000543120 IGKV5-2P06315 115 aa21.34■■□□□ 1.01
PTPN6-221ENST00000543120 GRIPAP1Q4V328 841 aa21.34■■□□□ 1.01
PTPN6-221ENST00000543120 CCDC191Q8NCU4 936 aa21.34■■□□□ 1.01
PTPN6-221ENST00000543120 CELF1Q92879 486 aaKnown RBP21.33■■□□□ 1.01
PTPN6-221ENST00000543120 CWC25Q9NXE8 425 aaPredicted RBP21.33■■□□□ 1.01
PTPN6-221ENST00000543120 ANKRD36CQ5JPF3 1778 aa21.33■■□□□ 1
PTPN6-221ENST00000543120 ZNF521Q96K83 1311 aa21.32■■□□□ 1
PTPN6-221ENST00000543120 FSTL1Q12841 308 aa21.32■■□□□ 1
PTPN6-221ENST00000543120 TIAM2Q8IVF5 1701 aa21.32■■□□□ 1
PTPN6-221ENST00000543120 COL4A5P29400 1685 aa21.31■■□□□ 1
PTPN6-221ENST00000543120 PCCAP05165 728 aaPredicted RBP21.31■■□□□ 1
PTPN6-221ENST00000543120 RTFDC1Q9BY42 306 aaPredicted RBP21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms