RNA–Protein interactions for RNA: ENST00000542841.1

SRGAP1-205, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 836 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-205ENST00000542841 SYNE4Q8N205 404 aa15.04■□□□□ -0
SRGAP1-205ENST00000542841 JDP2Q8WYK2 163 aa15.04■□□□□ -0
SRGAP1-205ENST00000542841 PLEKHF1Q96S99 279 aa15.04■□□□□ -0
SRGAP1-205ENST00000542841 BEGAINQ9BUH8 593 aa15.04■□□□□ -0
SRGAP1-205ENST00000542841 NIP7Q9Y221 180 aaKnown RBP eCLIP15.04■□□□□ -0
SRGAP1-205ENST00000542841 SIPA1L3O60292 1781 aaPredicted RBP15.03■□□□□ -0
SRGAP1-205ENST00000542841 APAF1O14727 1248 aa15.03■□□□□ -0
SRGAP1-205ENST00000542841 KCNQ3O43525 872 aa15.03■□□□□ -0
SRGAP1-205ENST00000542841 CCDC146Q8IYE0 955 aa15.03■□□□□ -0
SRGAP1-205ENST00000542841 RSPH6AQ9H0K4 717 aa15.03■□□□□ -0
SRGAP1-205ENST00000542841 DDX21Q9NR30 783 aaKnown RBP eCLIP15.03■□□□□ -0
SRGAP1-205ENST00000542841 RGL2O15211 777 aa15.02■□□□□ -0
SRGAP1-205ENST00000542841 SNRPA1P09661 255 aaKnown RBP15.02■□□□□ -0
SRGAP1-205ENST00000542841 GTF2E1P29083 439 aaPredicted RBP15.02■□□□□ -0
SRGAP1-205ENST00000542841 ECE1P42892 770 aa15.02■□□□□ -0
SRGAP1-205ENST00000542841 PAXIP1Q6ZW49 1069 aaPredicted RBP15.02■□□□□ -0
SRGAP1-205ENST00000542841 FAM177BA6PVY3 158 aa15.01□□□□□ -0.01
SRGAP1-205ENST00000542841 LMOD1P29536 600 aaPredicted RBP15.01□□□□□ -0.01
SRGAP1-205ENST00000542841 EIF6P56537 245 aaKnown RBP15.01□□□□□ -0.01
SRGAP1-205ENST00000542841 MLLT1Q03111 559 aaPredicted RBP15.01□□□□□ -0.01
SRGAP1-205ENST00000542841 PSMD1Q99460 953 aa15.01□□□□□ -0.01
SRGAP1-205ENST00000542841 PRAMEF22A3QJZ6 481 aa15□□□□□ -0.01
SRGAP1-205ENST00000542841 CCDC85CA6NKD9 419 aa15□□□□□ -0.01
SRGAP1-205ENST00000542841 CAPNS2Q96L46 248 aa15□□□□□ -0.01
SRGAP1-205ENST00000542841 GJA3Q9Y6H8 435 aa15□□□□□ -0.01
SRGAP1-205ENST00000542841 GRM1Q13255 1194 aa14.99□□□□□ -0.01
SRGAP1-205ENST00000542841 CC2D2BQ6DHV5 1058 aa14.99□□□□□ -0.01
SRGAP1-205ENST00000542841 GPR101Q96P66 508 aaPredicted RBP14.99□□□□□ -0.01
SRGAP1-205ENST00000542841 DLG5Q8TDM6 1919 aa14.98□□□□□ -0.01
SRGAP1-205ENST00000542841 PRKAR2BP31323 418 aa14.98□□□□□ -0.01
SRGAP1-205ENST00000542841 GOLGA2Q08379 1002 aa14.98□□□□□ -0.01
SRGAP1-205ENST00000542841 GRIPAP1Q4V328 841 aa14.98□□□□□ -0.01
SRGAP1-205ENST00000542841 WDR63Q8IWG1 891 aa14.98□□□□□ -0.01
SRGAP1-205ENST00000542841 RTF1Q92541 710 aaKnown RBP14.98□□□□□ -0.01
SRGAP1-205ENST00000542841 PHACTR3Q96KR7 559 aa14.98□□□□□ -0.01
SRGAP1-205ENST00000542841 NBPF26B4DH59 902 aa14.97□□□□□ -0.01
SRGAP1-205ENST00000542841 TMPOP42166 694 aaKnown RBP14.97□□□□□ -0.01
SRGAP1-205ENST00000542841 RGS19P49795 217 aa14.97□□□□□ -0.01
SRGAP1-205ENST00000542841 SCNN1DP51172 638 aa14.97□□□□□ -0.01
SRGAP1-205ENST00000542841 HLFQ16534 295 aa14.97□□□□□ -0.01
SRGAP1-205ENST00000542841 CRY2Q49AN0 593 aa14.97□□□□□ -0.01
SRGAP1-205ENST00000542841 CYP4F22Q6NT55 531 aa14.97□□□□□ -0.01
SRGAP1-205ENST00000542841 NBPF10Q6P3W6 841 aaKnown RBP14.97□□□□□ -0.01
SRGAP1-205ENST00000542841 USP50Q70EL3 339 aaPredicted RBP14.97□□□□□ -0.01
SRGAP1-205ENST00000542841 NBPF15Q8N660 670 aa14.97□□□□□ -0.01
SRGAP1-205ENST00000542841 NYXQ9GZU5 481 aa14.97□□□□□ -0.01
SRGAP1-205ENST00000542841 EPS15P42566 896 aa14.96□□□□□ -0.01
SRGAP1-205ENST00000542841 FMR1Q06787 632 aaKnown RBP eCLIP14.96□□□□□ -0.01
SRGAP1-205ENST00000542841 WWC1Q8IX03 1113 aa14.96□□□□□ -0.01
SRGAP1-205ENST00000542841 LARGE2Q8N3Y3 721 aa14.96□□□□□ -0.01
SRGAP1-205ENST00000542841 SNED1Q8TER0 1413 aa14.96□□□□□ -0.01
SRGAP1-205ENST00000542841 RPGRQ92834 1020 aaKnown RBP14.96□□□□□ -0.01
SRGAP1-205ENST00000542841 THSD7BQ9C0I4 1608 aa14.95□□□□□ -0.02
SRGAP1-205ENST00000542841 E9PSI1 815 aa14.95□□□□□ -0.02
SRGAP1-205ENST00000542841 MAP2K2P36507 400 aa14.95□□□□□ -0.02
SRGAP1-205ENST00000542841 LMOD3Q0VAK6 560 aa14.95□□□□□ -0.02
SRGAP1-205ENST00000542841 NFE2L2Q16236 605 aa14.95□□□□□ -0.02
SRGAP1-205ENST00000542841 CST9Q5W186 159 aa14.95□□□□□ -0.02
SRGAP1-205ENST00000542841 MCM10Q7L590 875 aa14.95□□□□□ -0.02
SRGAP1-205ENST00000542841 SALL2Q9Y467 1007 aaPredicted RBP14.95□□□□□ -0.02
SRGAP1-205ENST00000542841 TLL2Q9Y6L7 1015 aa14.95□□□□□ -0.02
SRGAP1-205ENST00000542841 IL16Q14005 1332 aa14.94□□□□□ -0.02
SRGAP1-205ENST00000542841 TRAF5O00463 557 aa14.94□□□□□ -0.02
SRGAP1-205ENST00000542841 NUTM1Q86Y26 1132 aa14.94□□□□□ -0.02
SRGAP1-205ENST00000542841 LTBP1Q14766 1721 aa14.94□□□□□ -0.02
SRGAP1-205ENST00000542841 CA12O43570 354 aa14.93□□□□□ -0.02
SRGAP1-205ENST00000542841 HOXA10P31260 410 aaPredicted RBP14.93□□□□□ -0.02
SRGAP1-205ENST00000542841 CALD1Q05682 793 aaKnown RBP14.93□□□□□ -0.02
SRGAP1-205ENST00000542841 SLFN5Q08AF3 891 aa14.93□□□□□ -0.02
SRGAP1-205ENST00000542841 NIM1KQ8IY84 436 aa14.93□□□□□ -0.02
SRGAP1-205ENST00000542841 TRMT2AQ8IZ69 625 aaKnown RBP14.93□□□□□ -0.02
SRGAP1-205ENST00000542841 PCDH10Q9P2E7 1040 aa14.93□□□□□ -0.02
SRGAP1-205ENST00000542841 TSKSQ9UJT2 592 aa14.93□□□□□ -0.02
SRGAP1-205ENST00000542841 ABCC12Q96J65 1359 aa14.93□□□□□ -0.02
SRGAP1-205ENST00000542841 COL4A5P29400 1685 aa14.93□□□□□ -0.02
SRGAP1-205ENST00000542841 ERVV-1B6SEH8 477 aa14.92□□□□□ -0.02
SRGAP1-205ENST00000542841 AOC2O75106 756 aa14.92□□□□□ -0.02
SRGAP1-205ENST00000542841 RIPK4P57078 832 aa14.92□□□□□ -0.02
SRGAP1-205ENST00000542841 SAPCD2Q86UD0 394 aa14.92□□□□□ -0.02
SRGAP1-205ENST00000542841 RBM17Q96I25 401 aaKnown RBP14.92□□□□□ -0.02
SRGAP1-205ENST00000542841 CFAP44Q96MT7 982 aa14.92□□□□□ -0.02
SRGAP1-205ENST00000542841 TMX4Q9H1E5 349 aaPredicted RBP14.92□□□□□ -0.02
SRGAP1-205ENST00000542841 ADARB2Q9NS39 739 aaKnown RBP14.92□□□□□ -0.02
SRGAP1-205ENST00000542841 PPEF1O14829 653 aaPredicted RBP14.91□□□□□ -0.02
SRGAP1-205ENST00000542841 GPRC5DQ9NZD1 345 aa14.91□□□□□ -0.02
SRGAP1-205ENST00000542841 TCERG1O14776 1098 aaKnown RBP14.9□□□□□ -0.02
SRGAP1-205ENST00000542841 PPIP5K2O43314 1243 aa14.9□□□□□ -0.02
SRGAP1-205ENST00000542841 HTATSF1O43719 755 aaKnown RBP14.9□□□□□ -0.02
SRGAP1-205ENST00000542841 CELF2O95319 508 aaKnown RBP14.9□□□□□ -0.02
SRGAP1-205ENST00000542841 DCTN1Q14203 1278 aa14.9□□□□□ -0.02
SRGAP1-205ENST00000542841 TAF7Q15545 349 aaPredicted RBP14.9□□□□□ -0.02
SRGAP1-205ENST00000542841 DUSP27Q5VZP5 1158 aa14.9□□□□□ -0.02
SRGAP1-205ENST00000542841 KIF6Q6ZMV9 814 aa14.9□□□□□ -0.02
SRGAP1-205ENST00000542841 HHIPL1Q96JK4 782 aa14.9□□□□□ -0.02
SRGAP1-205ENST00000542841 CRAMP1Q96RY5 1269 aa14.9□□□□□ -0.02
SRGAP1-205ENST00000542841 MCOLN1Q9GZU1 580 aa14.9□□□□□ -0.02
SRGAP1-205ENST00000542841 VPS33BQ9H267 617 aa14.9□□□□□ -0.02
SRGAP1-205ENST00000542841 MYH16Q9H6N6 1097 aa14.9□□□□□ -0.02
SRGAP1-205ENST00000542841 TRIM35Q9UPQ4 493 aa14.9□□□□□ -0.02
SRGAP1-205ENST00000542841 RRP7AQ9Y3A4 280 aaKnown RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms