RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-223ENST00000542838 NMIQ13287 307 aaPredicted RBP15.38■□□□□ 0.05
DDX11-223ENST00000542838 PRDM4Q9UKN5 801 aa15.38■□□□□ 0.05
DDX11-223ENST00000542838 MAP3K2Q9Y2U5 619 aa15.38■□□□□ 0.05
DDX11-223ENST00000542838 TBX22Q9Y458 520 aa15.38■□□□□ 0.05
DDX11-223ENST00000542838 KDM3BQ7LBC6 1761 aa15.38■□□□□ 0.05
DDX11-223ENST00000542838 CHAF1AQ13111 956 aaPredicted RBP15.37■□□□□ 0.05
DDX11-223ENST00000542838 MAP4K1Q92918 833 aa15.37■□□□□ 0.05
DDX11-223ENST00000542838 CHD2O14647 1828 aaKnown RBP15.37■□□□□ 0.05
DDX11-223ENST00000542838 PRDM10Q9NQV6 1147 aa15.37■□□□□ 0.05
DDX11-223ENST00000542838 SLC27A2O14975 620 aa15.37■□□□□ 0.05
DDX11-223ENST00000542838 PDCP20941 246 aa15.37■□□□□ 0.05
DDX11-223ENST00000542838 TYRO3Q06418 890 aa15.37■□□□□ 0.05
DDX11-223ENST00000542838 BCL2L12Q9HB09 334 aa15.37■□□□□ 0.05
DDX11-223ENST00000542838 DBF4Q9UBU7 674 aaPredicted RBP15.37■□□□□ 0.05
DDX11-223ENST00000542838 MRVI1Q9Y6F6 885 aa15.37■□□□□ 0.05
DDX11-223ENST00000542838 MED1Q15648 1581 aaPredicted RBP15.36■□□□□ 0.05
DDX11-223ENST00000542838 HIP1O00291 1037 aa15.36■□□□□ 0.05
DDX11-223ENST00000542838 ALDH1L1O75891 902 aa15.36■□□□□ 0.05
DDX11-223ENST00000542838 PDIA4P13667 645 aaKnown RBP15.36■□□□□ 0.05
DDX11-223ENST00000542838 NBPF6Q5VWK0 638 aa15.36■□□□□ 0.05
DDX11-223ENST00000542838 NBPF4Q96M43 638 aa15.36■□□□□ 0.05
DDX11-223ENST00000542838 GOLGA6L4A6NEF3 574 aa15.36■□□□□ 0.05
DDX11-223ENST00000542838 CEBPAP49715 358 aaPredicted RBP15.36■□□□□ 0.05
DDX11-223ENST00000542838 COL9A3Q14050 684 aaPredicted RBP15.36■□□□□ 0.05
DDX11-223ENST00000542838 CWF19L2Q2TBE0 894 aaKnown RBP15.36■□□□□ 0.05
DDX11-223ENST00000542838 BLOC1S2Q6QNY1 142 aa15.36■□□□□ 0.05
DDX11-223ENST00000542838 TCEANC2Q96MN5 208 aa15.36■□□□□ 0.05
DDX11-223ENST00000542838 ELP1O95163 1332 aa15.36■□□□□ 0.05
DDX11-223ENST00000542838 LUZP1Q86V48 1076 aa15.35■□□□□ 0.05
DDX11-223ENST00000542838 CKAP2LQ8IYA6 745 aa15.35■□□□□ 0.05
DDX11-223ENST00000542838 CCDC8Q9H0W5 538 aaPredicted RBP15.35■□□□□ 0.05
DDX11-223ENST00000542838 TNMDQ9H2S6 317 aa15.35■□□□□ 0.05
DDX11-223ENST00000542838 HDAC5Q9UQL6 1122 aa15.35■□□□□ 0.05
DDX11-223ENST00000542838 PTGS1P23219 599 aa15.35■□□□□ 0.05
DDX11-223ENST00000542838 LTN1O94822 1766 aa15.35■□□□□ 0.05
DDX11-223ENST00000542838 RIOK3O14730 519 aaKnown RBP15.35■□□□□ 0.05
DDX11-223ENST00000542838 G3BP1Q13283 466 aaKnown RBP eCLIP15.35■□□□□ 0.05
DDX11-223ENST00000542838 ANKRD1Q15327 319 aa15.35■□□□□ 0.05
DDX11-223ENST00000542838 MPRIPQ6WCQ1 1025 aa15.35■□□□□ 0.05
DDX11-223ENST00000542838 IP6K1Q92551 441 aa15.35■□□□□ 0.05
DDX11-223ENST00000542838 DACT1Q9NYF0 836 aa15.35■□□□□ 0.05
DDX11-223ENST00000542838 RNF20Q5VTR2 975 aa15.34■□□□□ 0.05
DDX11-223ENST00000542838 ZNF530Q6P9A1 599 aaPredicted RBP15.34■□□□□ 0.05
DDX11-223ENST00000542838 KSR2Q6VAB6 950 aa15.34■□□□□ 0.05
DDX11-223ENST00000542838 EAF2Q96CJ1 260 aaPredicted RBP15.34■□□□□ 0.05
DDX11-223ENST00000542838 SPATA32Q96LK8 384 aa15.34■□□□□ 0.05
DDX11-223ENST00000542838 TFIP11Q9UBB9 837 aaKnown RBP15.34■□□□□ 0.05
DDX11-223ENST00000542838 ANKARQ7Z5J8 1434 aa15.34■□□□□ 0.05
DDX11-223ENST00000542838 SASH1O94885 1247 aa15.34■□□□□ 0.05
DDX11-223ENST00000542838 PROSER3Q2NL68 480 aa15.34■□□□□ 0.05
DDX11-223ENST00000542838 PPP4R3BQ5MIZ7 849 aa15.34■□□□□ 0.05
DDX11-223ENST00000542838 FSD1Q9BTV5 496 aa15.34■□□□□ 0.05
DDX11-223ENST00000542838 SCAND2PQ9GZW5 306 aaPredicted RBP15.34■□□□□ 0.05
DDX11-223ENST00000542838 BOLA2Q9H3K6 86 aa15.34■□□□□ 0.05
DDX11-223ENST00000542838 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.34■□□□□ 0.05
DDX11-223ENST00000542838 A0A0D9SFI3 127 aa15.33■□□□□ 0.05
DDX11-223ENST00000542838 ANO6Q4KMQ2 910 aa15.33■□□□□ 0.05
DDX11-223ENST00000542838 AKAP4Q5JQC9 854 aa15.33■□□□□ 0.05
DDX11-223ENST00000542838 PLPPR3Q6T4P5 718 aa15.33■□□□□ 0.05
DDX11-223ENST00000542838 CBX8Q9HC52 389 aa15.33■□□□□ 0.05
DDX11-223ENST00000542838 USP54Q70EL1 1684 aa15.33■□□□□ 0.05
DDX11-223ENST00000542838 RPS6KB1P23443 525 aa15.33■□□□□ 0.04
DDX11-223ENST00000542838 STK3Q13188 491 aa15.33■□□□□ 0.04
DDX11-223ENST00000542838 LARP1Q6PKG0 1096 aaKnown RBP15.33■□□□□ 0.04
DDX11-223ENST00000542838 DRC7Q8IY82 874 aa15.33■□□□□ 0.04
DDX11-223ENST00000542838 SUCLG2Q96I99 432 aa15.33■□□□□ 0.04
DDX11-223ENST00000542838 CBX1P83916 185 aa15.32■□□□□ 0.04
DDX11-223ENST00000542838 CCDC186Q7Z3E2 898 aa15.32■□□□□ 0.04
DDX11-223ENST00000542838 DDX19AQ9NUU7 478 aaKnown RBP15.32■□□□□ 0.04
DDX11-223ENST00000542838 TLR7Q9NYK1 1049 aaKnown RBP15.32■□□□□ 0.04
DDX11-223ENST00000542838 TOB2Q14106 344 aaPredicted RBP15.32■□□□□ 0.04
DDX11-223ENST00000542838 BICC1Q9H694 974 aaKnown RBP15.32■□□□□ 0.04
DDX11-223ENST00000542838 TAF6LQ9Y6J9 622 aa15.32■□□□□ 0.04
DDX11-223ENST00000542838 NPHP3Q7Z494 1330 aa15.31■□□□□ 0.04
DDX11-223ENST00000542838 PDCL2Q8N4E4 241 aa15.31■□□□□ 0.04
DDX11-223ENST00000542838 LEO1Q8WVC0 666 aaPredicted RBP15.31■□□□□ 0.04
DDX11-223ENST00000542838 SIL1Q9H173 461 aa15.31■□□□□ 0.04
DDX11-223ENST00000542838 SNRKQ9NRH2 765 aa15.31■□□□□ 0.04
DDX11-223ENST00000542838 GRM8O00222 908 aa15.31■□□□□ 0.04
DDX11-223ENST00000542838 PLEKHO1Q53GL0 409 aaPredicted RBP15.31■□□□□ 0.04
DDX11-223ENST00000542838 TRIM5Q9C035 493 aa15.31■□□□□ 0.04
DDX11-223ENST00000542838 NPHP4O75161 1426 aaPredicted RBP15.31■□□□□ 0.04
DDX11-223ENST00000542838 GIGYF1O75420 1035 aaPredicted RBP15.3■□□□□ 0.04
DDX11-223ENST00000542838 LRRC59Q96AG4 307 aaKnown RBP15.3■□□□□ 0.04
DDX11-223ENST00000542838 CLSTN2Q9H4D0 955 aa15.3■□□□□ 0.04
DDX11-223ENST00000542838 RNMTO43148 476 aaKnown RBP15.3■□□□□ 0.04
DDX11-223ENST00000542838 LINS1Q8NG48 757 aa15.3■□□□□ 0.04
DDX11-223ENST00000542838 BICD2Q8TD16 824 aa15.3■□□□□ 0.04
DDX11-223ENST00000542838 KAZALD1Q96I82 304 aa15.3■□□□□ 0.04
DDX11-223ENST00000542838 ALDH8A1Q9H2A2 487 aaPredicted RBP15.3■□□□□ 0.04
DDX11-223ENST00000542838 LMO7Q8WWI1 1683 aa15.3■□□□□ 0.04
DDX11-223ENST00000542838 RGPD2P0DJD1 1756 aa15.3■□□□□ 0.04
DDX11-223ENST00000542838 PRAMEF22A3QJZ6 481 aa15.3■□□□□ 0.04
DDX11-223ENST00000542838 KCNA6P17658 529 aa15.3■□□□□ 0.04
DDX11-223ENST00000542838 ATP2B3Q16720 1220 aa15.3■□□□□ 0.04
DDX11-223ENST00000542838 ZNF589Q86UQ0 364 aaPredicted RBP15.3■□□□□ 0.04
DDX11-223ENST00000542838 NRBP1Q9UHY1 535 aa15.3■□□□□ 0.04
DDX11-223ENST00000542838 ZNF75DP51815 510 aa15.29■□□□□ 0.04
DDX11-223ENST00000542838 AIMP1Q12904 312 aaKnown RBP15.29■□□□□ 0.04
DDX11-223ENST00000542838 LRMPQ12912 555 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms