RNA–Protein interactions for RNA: ENST00000542661.1

DDX11-221, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-221ENST00000542661 MAP3K2Q9Y2U5 619 aa18.12■□□□□ 0.49
DDX11-221ENST00000542661 YY1P25490 414 aa18.11■□□□□ 0.49
DDX11-221ENST00000542661 NEXNQ0ZGT2 675 aa18.11■□□□□ 0.49
DDX11-221ENST00000542661 FKBP5Q13451 457 aaPredicted RBP18.11■□□□□ 0.49
DDX11-221ENST00000542661 ERFEQ4G0M1 354 aa18.11■□□□□ 0.49
DDX11-221ENST00000542661 DALRD3Q5D0E6 543 aaKnown RBP18.11■□□□□ 0.49
DDX11-221ENST00000542661 TRMT112Q9UI30 125 aaKnown RBP18.11■□□□□ 0.49
DDX11-221ENST00000542661 RIC1Q4ADV7 1423 aa18.11■□□□□ 0.49
DDX11-221ENST00000542661 KLRG2A4D1S0 409 aaPredicted RBP18.1■□□□□ 0.49
DDX11-221ENST00000542661 ATP5J2-PTCD1G3V325 749 aa18.1■□□□□ 0.49
DDX11-221ENST00000542661 YBX3P16989 372 aaKnown RBP eCLIP18.1■□□□□ 0.49
DDX11-221ENST00000542661 ALDH1L2Q3SY69 923 aa18.1■□□□□ 0.49
DDX11-221ENST00000542661 NUTM1Q86Y26 1132 aa18.1■□□□□ 0.49
DDX11-221ENST00000542661 CCDC191Q8NCU4 936 aa18.1■□□□□ 0.49
DDX11-221ENST00000542661 MYD88Q99836 296 aa18.1■□□□□ 0.49
DDX11-221ENST00000542661 BRCA1P38398 1863 aaKnown RBP18.09■□□□□ 0.49
DDX11-221ENST00000542661 DLEC1Q9Y238 1755 aa18.09■□□□□ 0.49
DDX11-221ENST00000542661 ADCY9O60503 1353 aa18.09■□□□□ 0.49
DDX11-221ENST00000542661 SH3TC1Q8TE82 1336 aa18.09■□□□□ 0.49
DDX11-221ENST00000542661 SLC10A5Q5PT55 438 aa18.09■□□□□ 0.49
DDX11-221ENST00000542661 STYK1Q6J9G0 422 aa18.09■□□□□ 0.49
DDX11-221ENST00000542661 BCS1LQ9Y276 419 aa18.09■□□□□ 0.49
DDX11-221ENST00000542661 SRGNP10124 158 aa18.08■□□□□ 0.48
DDX11-221ENST00000542661 NPR1P16066 1061 aa18.08■□□□□ 0.48
DDX11-221ENST00000542661 TTLL6Q8N841 843 aa18.08■□□□□ 0.48
DDX11-221ENST00000542661 ZNF622Q969S3 477 aaKnown RBP eCLIP18.08■□□□□ 0.484e-6■■■□□ 19.1
DDX11-221ENST00000542661 MASTLQ96GX5 879 aa18.08■□□□□ 0.48
DDX11-221ENST00000542661 ABCC12Q96J65 1359 aa18.07■□□□□ 0.48
DDX11-221ENST00000542661 HSP90B1P14625 803 aaKnown RBP18.07■□□□□ 0.48
DDX11-221ENST00000542661 MRPL50Q8N5N7 158 aaKnown RBP18.07■□□□□ 0.48
DDX11-221ENST00000542661 DNAAF4Q8WXU2 420 aa18.07■□□□□ 0.48
DDX11-221ENST00000542661 SSH1Q8WYL5 1049 aa18.07■□□□□ 0.48
DDX11-221ENST00000542661 CNKSR1Q969H4 720 aa18.07■□□□□ 0.48
DDX11-221ENST00000542661 NLRP3Q96P20 1036 aa18.07■□□□□ 0.48
DDX11-221ENST00000542661 CWC25Q9NXE8 425 aaPredicted RBP18.07■□□□□ 0.48
DDX11-221ENST00000542661 WWC3Q9ULE0 1092 aa18.07■□□□□ 0.48
DDX11-221ENST00000542661 CRY2Q49AN0 593 aa18.06■□□□□ 0.48
DDX11-221ENST00000542661 PTPRCP08575 1304 aa18.05■□□□□ 0.48
DDX11-221ENST00000542661 ZBTB38Q8NAP3 1195 aaPredicted RBP18.05■□□□□ 0.48
DDX11-221ENST00000542661 SMC4Q9NTJ3 1288 aa18.05■□□□□ 0.48
DDX11-221ENST00000542661 COL11A2P13942 1736 aaPredicted RBP18.05■□□□□ 0.48
DDX11-221ENST00000542661 ARFGEF1Q9Y6D6 1849 aa18.05■□□□□ 0.48
DDX11-221ENST00000542661 IGKV5-2P06315 115 aa18.04■□□□□ 0.48
DDX11-221ENST00000542661 ALDH1B1P30837 517 aa18.04■□□□□ 0.48
DDX11-221ENST00000542661 LINS1Q8NG48 757 aa18.04■□□□□ 0.48
DDX11-221ENST00000542661 RPGRQ92834 1020 aaKnown RBP18.04■□□□□ 0.48
DDX11-221ENST00000542661 FAM89AQ96GI7 184 aa18.04■□□□□ 0.48
DDX11-221ENST00000542661 NEURL1BA8MQ27 555 aa18.03■□□□□ 0.48
DDX11-221ENST00000542661 PCCAP05165 728 aaPredicted RBP18.03■□□□□ 0.48
DDX11-221ENST00000542661 HCLS1P14317 486 aaPredicted RBP18.03■□□□□ 0.48
DDX11-221ENST00000542661 HOXA10P31260 410 aaPredicted RBP18.03■□□□□ 0.48
DDX11-221ENST00000542661 TNRC6CQ9HCJ0 1690 aaKnown RBP18.03■□□□□ 0.48
DDX11-221ENST00000542661 BRPF1P55201 1214 aaPredicted RBP18.02■□□□□ 0.48
DDX11-221ENST00000542661 RBM17Q96I25 401 aaKnown RBP18.02■□□□□ 0.48
DDX11-221ENST00000542661 F6X3S4 739 aa18.01■□□□□ 0.47
DDX11-221ENST00000542661 IRS4O14654 1257 aaPredicted RBP18.01■□□□□ 0.47
DDX11-221ENST00000542661 RARSP54136 660 aaKnown RBP18.01■□□□□ 0.47
DDX11-221ENST00000542661 CWF19L2Q2TBE0 894 aaKnown RBP18.01■□□□□ 0.47
DDX11-221ENST00000542661 SOGA3Q5TF21 947 aa18.01■□□□□ 0.47
DDX11-221ENST00000542661 PRPF40BQ6NWY9 871 aaKnown RBP18.01■□□□□ 0.47
DDX11-221ENST00000542661 SYNE4Q8N205 404 aa18.01■□□□□ 0.47
DDX11-221ENST00000542661 CRAMP1Q96RY5 1269 aa18.01■□□□□ 0.47
DDX11-221ENST00000542661 BCL2L13Q9BXK5 485 aa18.01■□□□□ 0.47
DDX11-221ENST00000542661 CHD4Q14839 1912 aa18.01■□□□□ 0.47
DDX11-221ENST00000542661 GCKRQ14397 625 aa18■□□□□ 0.47
DDX11-221ENST00000542661 RTL5Q5HYW3 569 aaPredicted RBP18■□□□□ 0.47
DDX11-221ENST00000542661 ARHGAP27Q6ZUM4 889 aa18■□□□□ 0.47
DDX11-221ENST00000542661 CDHR2Q9BYE9 1310 aa17.99■□□□□ 0.47
DDX11-221ENST00000542661 BEND3Q5T5X7 828 aa17.99■□□□□ 0.47
DDX11-221ENST00000542661 C3orf67Q6ZVT6 689 aa17.99■□□□□ 0.47
DDX11-221ENST00000542661 KIF16BQ96L93 1317 aa17.98■□□□□ 0.47
DDX11-221ENST00000542661 DDX60Q8IY21 1712 aaKnown RBP17.98■□□□□ 0.47
DDX11-221ENST00000542661 ALDH1L1O75891 902 aa17.98■□□□□ 0.47
DDX11-221ENST00000542661 SF3B3Q15393 1217 aaKnown RBP17.98■□□□□ 0.47
DDX11-221ENST00000542661 SLC4A10Q6U841 1118 aa17.98■□□□□ 0.47
DDX11-221ENST00000542661 DDX46Q7L014 1031 aaKnown RBP17.98■□□□□ 0.47
DDX11-221ENST00000542661 SRCIN1Q9C0H9 1055 aa17.98■□□□□ 0.47
DDX11-221ENST00000542661 LAMB2P55268 1798 aa17.98■□□□□ 0.47
DDX11-221ENST00000542661 SLX4Q8IY92 1834 aa17.98■□□□□ 0.47
DDX11-221ENST00000542661 H7C1W4 665 aa17.97■□□□□ 0.47
DDX11-221ENST00000542661 C21orf2O43822 256 aa17.97■□□□□ 0.47
DDX11-221ENST00000542661 PDE8AO60658 829 aa17.97■□□□□ 0.47
DDX11-221ENST00000542661 IPO8O15397 1037 aaKnown RBP17.96■□□□□ 0.47
DDX11-221ENST00000542661 UBE3BQ7Z3V4 1068 aa17.96■□□□□ 0.47
DDX11-221ENST00000542661 C7orf43Q8WVR3 580 aa17.96■□□□□ 0.47
DDX11-221ENST00000542661 ARHGAP45Q92619 1136 aa17.96■□□□□ 0.47
DDX11-221ENST00000542661 API5Q9BZZ5 524 aaKnown RBP17.96■□□□□ 0.47
DDX11-221ENST00000542661 NOB1Q9ULX3 412 aaKnown RBP17.96■□□□□ 0.47
DDX11-221ENST00000542661 CACNA1SQ13698 1873 aa17.96■□□□□ 0.47
DDX11-221ENST00000542661 BBOX1O75936 387 aa17.95■□□□□ 0.46
DDX11-221ENST00000542661 CCDC152Q4G0S7 254 aa17.95■□□□□ 0.46
DDX11-221ENST00000542661 GRIPAP1Q4V328 841 aa17.95■□□□□ 0.46
DDX11-221ENST00000542661 CC2D2BQ6DHV5 1058 aa17.95■□□□□ 0.46
DDX11-221ENST00000542661 TMX4Q9H1E5 349 aaPredicted RBP17.95■□□□□ 0.46
DDX11-221ENST00000542661 ZNF219Q9P2Y4 722 aaPredicted RBP17.95■□□□□ 0.46
DDX11-221ENST00000542661 CCDC93Q567U6 631 aa17.94■□□□□ 0.46
DDX11-221ENST00000542661 TMC4Q7Z404 712 aa17.94■□□□□ 0.46
DDX11-221ENST00000542661 RTKN2Q8IZC4 609 aa17.94■□□□□ 0.46
DDX11-221ENST00000542661 JARID2Q92833 1246 aaPredicted RBP17.94■□□□□ 0.46
DDX11-221ENST00000542661 C9orf78Q9NZ63 289 aaPredicted RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms