RNA–Protein interactions for RNA: ENST00000542416.1

UBC-211, Transcript of ubiquitin C, humanhuman

TSL 4

Gene UBC, Length 517 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-211ENST00000542416 LARGE2Q8N3Y3 721 aa11.88□□□□□ -0.51
UBC-211ENST00000542416 ABHD8Q96I13 439 aa11.88□□□□□ -0.51
UBC-211ENST00000542416 RBM17Q96I25 401 aaKnown RBP11.88□□□□□ -0.51
UBC-211ENST00000542416 GJA3Q9Y6H8 435 aa11.88□□□□□ -0.51
UBC-211ENST00000542416 COL11A2P13942 1736 aaPredicted RBP11.88□□□□□ -0.51
UBC-211ENST00000542416 CRAMP1Q96RY5 1269 aa11.87□□□□□ -0.51
UBC-211ENST00000542416 IBTKQ9P2D0 1353 aaPredicted RBP11.87□□□□□ -0.51
UBC-211ENST00000542416 CCDC88AQ3V6T2 1871 aa11.87□□□□□ -0.51
UBC-211ENST00000542416 MAP3K15Q6ZN16 1313 aa11.86□□□□□ -0.51
UBC-211ENST00000542416 CA12O43570 354 aa11.86□□□□□ -0.51
UBC-211ENST00000542416 MAP2K2P36507 400 aa11.86□□□□□ -0.51
UBC-211ENST00000542416 PAXIP1Q6ZW49 1069 aaPredicted RBP11.86□□□□□ -0.51
UBC-211ENST00000542416 NIM1KQ8IY84 436 aa11.86□□□□□ -0.51
UBC-211ENST00000542416 CAPNS2Q96L46 248 aa11.86□□□□□ -0.51
UBC-211ENST00000542416 GPR101Q96P66 508 aaPredicted RBP11.86□□□□□ -0.51
UBC-211ENST00000542416 EPS15P42566 896 aa11.85□□□□□ -0.51
UBC-211ENST00000542416 SCNN1DP51172 638 aa11.85□□□□□ -0.51
UBC-211ENST00000542416 DCTN1Q14203 1278 aa11.85□□□□□ -0.51
UBC-211ENST00000542416 PPP1R42Q7Z4L9 355 aa11.85□□□□□ -0.51
UBC-211ENST00000542416 NUTM1Q86Y26 1132 aa11.85□□□□□ -0.51
UBC-211ENST00000542416 NGEFQ8N5V2 710 aa11.85□□□□□ -0.51
UBC-211ENST00000542416 SUPT20HQ8NEM7 779 aa11.85□□□□□ -0.51
UBC-211ENST00000542416 RIC1Q4ADV7 1423 aa11.85□□□□□ -0.51
UBC-211ENST00000542416 PPEF1O14829 653 aaPredicted RBP11.84□□□□□ -0.51
UBC-211ENST00000542416 PARP10Q53GL7 1025 aa11.84□□□□□ -0.51
UBC-211ENST00000542416 NLRP3Q96P20 1036 aa11.84□□□□□ -0.51
UBC-211ENST00000542416 PNNQ9H307 717 aaKnown RBP11.84□□□□□ -0.51
UBC-211ENST00000542416 ADARB2Q9NS39 739 aaKnown RBP11.84□□□□□ -0.51
UBC-211ENST00000542416 RRP7AQ9Y3A4 280 aaKnown RBP11.84□□□□□ -0.51
UBC-211ENST00000542416 TLL2Q9Y6L7 1015 aa11.84□□□□□ -0.51
UBC-211ENST00000542416 ERBB4Q15303 1308 aa11.84□□□□□ -0.51
UBC-211ENST00000542416 BCORQ6W2J9 1755 aa11.83□□□□□ -0.52
UBC-211ENST00000542416 PPIP5K2O43314 1243 aa11.83□□□□□ -0.52
UBC-211ENST00000542416 PPP2R1AP30153 589 aa11.83□□□□□ -0.52
UBC-211ENST00000542416 GIGYF2Q6Y7W6 1299 aaKnown RBP11.83□□□□□ -0.52
UBC-211ENST00000542416 HHIPL1Q96JK4 782 aa11.83□□□□□ -0.52
UBC-211ENST00000542416 MIS18AQ9NYP9 233 aa11.83□□□□□ -0.52
UBC-211ENST00000542416 ZNRF3Q9ULT6 936 aa11.83□□□□□ -0.52
UBC-211ENST00000542416 SNED1Q8TER0 1413 aa11.83□□□□□ -0.52
UBC-211ENST00000542416 SIPA1L3O60292 1781 aaPredicted RBP11.82□□□□□ -0.52
UBC-211ENST00000542416 ARFGEF2Q9Y6D5 1785 aa11.82□□□□□ -0.52
UBC-211ENST00000542416 ABCC12Q96J65 1359 aa11.82□□□□□ -0.52
UBC-211ENST00000542416 BBOX1O75936 387 aa11.82□□□□□ -0.52
UBC-211ENST00000542416 GPTP24298 496 aa11.82□□□□□ -0.52
UBC-211ENST00000542416 EIF4A1P60842 406 aaKnown RBP11.82□□□□□ -0.52
UBC-211ENST00000542416 MLLT1Q03111 559 aaPredicted RBP11.82□□□□□ -0.52
UBC-211ENST00000542416 SUSD4Q5VX71 490 aa11.82□□□□□ -0.52
UBC-211ENST00000542416 CST9Q5W186 159 aa11.82□□□□□ -0.52
UBC-211ENST00000542416 CYP4F22Q6NT55 531 aa11.82□□□□□ -0.52
UBC-211ENST00000542416 ZNF34Q8IZ26 560 aa11.82□□□□□ -0.52
UBC-211ENST00000542416 ZC3H15Q8WU90 426 aaKnown RBP11.82□□□□□ -0.52
UBC-211ENST00000542416 GPRC5DQ9NZD1 345 aa11.82□□□□□ -0.52
UBC-211ENST00000542416 ATP6V0A2Q9Y487 856 aa11.82□□□□□ -0.52
UBC-211ENST00000542416 CDHR2Q9BYE9 1310 aa11.82□□□□□ -0.52
UBC-211ENST00000542416 CCDC85CA6NKD9 419 aa11.81□□□□□ -0.52
UBC-211ENST00000542416 SLC34A2O95436 690 aa11.81□□□□□ -0.52
UBC-211ENST00000542416 MYL6BP14649 208 aa11.81□□□□□ -0.52
UBC-211ENST00000542416 RGS19P49795 217 aa11.81□□□□□ -0.52
UBC-211ENST00000542416 GRM1Q13255 1194 aa11.81□□□□□ -0.52
UBC-211ENST00000542416 TNIP1Q15025 636 aa11.81□□□□□ -0.52
UBC-211ENST00000542416 FAM161AQ3B820 660 aa11.81□□□□□ -0.52
UBC-211ENST00000542416 SLC10A5Q5PT55 438 aa11.81□□□□□ -0.52
UBC-211ENST00000542416 TTLL7Q6ZT98 887 aa11.81□□□□□ -0.52
UBC-211ENST00000542416 SAPCD2Q86UD0 394 aa11.81□□□□□ -0.52
UBC-211ENST00000542416 UTP14AQ9BVJ6 771 aaKnown RBP11.81□□□□□ -0.52
UBC-211ENST00000542416 RTFDC1Q9BY42 306 aaPredicted RBP11.81□□□□□ -0.52
UBC-211ENST00000542416 ZBTB3Q9H5J0 574 aa11.81□□□□□ -0.52
UBC-211ENST00000542416 ADAMTSL1Q8N6G6 1762 aa11.81□□□□□ -0.52
UBC-211ENST00000542416 UBN2Q6ZU65 1347 aa11.81□□□□□ -0.52
UBC-211ENST00000542416 VIRMAQ69YN4 1812 aaKnown RBP11.81□□□□□ -0.52
UBC-211ENST00000542416 CELF2O95319 508 aaKnown RBP11.8□□□□□ -0.52
UBC-211ENST00000542416 NTSR2O95665 410 aa11.8□□□□□ -0.52
UBC-211ENST00000542416 AOC3Q16853 763 aa11.8□□□□□ -0.52
UBC-211ENST00000542416 PGAP2Q9UHJ9 254 aa11.8□□□□□ -0.52
UBC-211ENST00000542416 TRAF5O00463 557 aa11.79□□□□□ -0.52
UBC-211ENST00000542416 TCERG1O14776 1098 aaKnown RBP11.79□□□□□ -0.52
UBC-211ENST00000542416 BRPF1P55201 1214 aaPredicted RBP11.79□□□□□ -0.52
UBC-211ENST00000542416 CXCL9Q07325 125 aa11.79□□□□□ -0.52
UBC-211ENST00000542416 HSP90AB3PQ58FF7 597 aa11.79□□□□□ -0.52
UBC-211ENST00000542416 CIAPIN1Q6FI81 312 aa11.79□□□□□ -0.52
UBC-211ENST00000542416 DPP8Q6V1X1 898 aaPredicted RBP11.79□□□□□ -0.52
UBC-211ENST00000542416 CDC37L1Q7L3B6 337 aa11.79□□□□□ -0.52
UBC-211ENST00000542416 TMC4Q7Z404 712 aa11.79□□□□□ -0.52
UBC-211ENST00000542416 SP8Q8IXZ3 490 aa11.79□□□□□ -0.52
UBC-211ENST00000542416 BCL2L13Q9BXK5 485 aa11.79□□□□□ -0.52
UBC-211ENST00000542416 H7C1D1 291 aa11.78□□□□□ -0.52
UBC-211ENST00000542416 FMR1Q06787 632 aaKnown RBP eCLIP11.78□□□□□ -0.522e-39■□□□□ 10.8
UBC-211ENST00000542416 KIAA2012Q0VF49 1180 aa11.78□□□□□ -0.52
UBC-211ENST00000542416 NFE2L2Q16236 605 aa11.78□□□□□ -0.52
UBC-211ENST00000542416 MPNDQ8N594 471 aa11.78□□□□□ -0.52
UBC-211ENST00000542416 BABAM1Q9NWV8 329 aa11.78□□□□□ -0.52
UBC-211ENST00000542416 GMPSP49915 693 aaPredicted RBP11.77□□□□□ -0.53
UBC-211ENST00000542416 NOGQ13253 232 aa11.77□□□□□ -0.53
UBC-211ENST00000542416 DDX46Q7L014 1031 aaKnown RBP11.77□□□□□ -0.53
UBC-211ENST00000542416 MAPK8IP3Q9UPT6 1336 aa11.77□□□□□ -0.53
UBC-211ENST00000542416 AOC2O75106 756 aa11.76□□□□□ -0.53
UBC-211ENST00000542416 PLEKHF1Q96S99 279 aa11.76□□□□□ -0.53
UBC-211ENST00000542416 GLIS2Q9BZE0 524 aaPredicted RBP11.76□□□□□ -0.53
UBC-211ENST00000542416 TSPYL4Q9UJ04 414 aa11.76□□□□□ -0.53
UBC-211ENST00000542416 ABCC4O15439 1325 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms