RNA–Protein interactions for RNA: ENST00000542367.1

CCND1-205, Transcript of cyclin D1, humanhuman

TSL 1 (best)

Gene CCND1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-205ENST00000542367 HSP90AB3PQ58FF7 597 aa21.31■■□□□ 1
CCND1-205ENST00000542367 UTP14AQ9BVJ6 771 aaKnown RBP21.31■■□□□ 1
CCND1-205ENST00000542367 GLTPD2A6NH11 291 aa21.3■■□□□ 1
CCND1-205ENST00000542367 TCIRG1Q13488 830 aa21.3■■□□□ 1
CCND1-205ENST00000542367 OLFM4Q6UX06 510 aa21.3■■□□□ 1
CCND1-205ENST00000542367 ANKRD13DQ6ZTN6 518 aa21.29■■□□□ 1
CCND1-205ENST00000542367 NLRP10Q86W26 655 aa21.29■■□□□ 1
CCND1-205ENST00000542367 C16orf71Q8IYS4 520 aaPredicted RBP21.29■■□□□ 1
CCND1-205ENST00000542367 RPGRQ92834 1020 aaKnown RBP21.29■■□□□ 1
CCND1-205ENST00000542367 RIC1Q4ADV7 1423 aa21.29■■□□□ 1
CCND1-205ENST00000542367 HSPA6P17066 643 aa21.28■■□□□ 1
CCND1-205ENST00000542367 SLC10A5Q5PT55 438 aa21.28■■□□□ 1
CCND1-205ENST00000542367 C3orf67Q6ZVT6 689 aa21.28■■□□□ 1
CCND1-205ENST00000542367 PLBD2Q8NHP8 589 aa21.28■■□□□ 1
CCND1-205ENST00000542367 HYPKQ9NX55 129 aa21.28■■□□□ 1
CCND1-205ENST00000542367 TIAM2Q8IVF5 1701 aa21.27■■□□□ 1
CCND1-205ENST00000542367 HOXA10P31260 410 aaPredicted RBP21.27■■□□□ 1
CCND1-205ENST00000542367 DPY19L2Q6NUT2 758 aa21.27■■□□□ 1
CCND1-205ENST00000542367 RTKN2Q8IZC4 609 aa21.27■■□□□ 1
CCND1-205ENST00000542367 C8orf58Q8NAV2 365 aa21.27■■□□□ 1
CCND1-205ENST00000542367 NLRP3Q96P20 1036 aa21.27■■□□□ 1
CCND1-205ENST00000542367 DICER1Q9UPY3 1922 aaKnown RBP21.27■■□□□ 1
CCND1-205ENST00000542367 FKBP4Q02790 459 aaKnown RBP eCLIP21.26■□□□□ 0.995e-6■■■□□ 15.1
CCND1-205ENST00000542367 CCDC27Q2M243 656 aa21.26■□□□□ 0.99
CCND1-205ENST00000542367 WWC1Q8IX03 1113 aa21.26■□□□□ 0.99
CCND1-205ENST00000542367 RBM17Q96I25 401 aaKnown RBP21.26■□□□□ 0.99
CCND1-205ENST00000542367 ANKRD36CQ5JPF3 1778 aa21.25■□□□□ 0.99
CCND1-205ENST00000542367 SYNE4Q8N205 404 aa21.25■□□□□ 0.99
CCND1-205ENST00000542367 RBM46Q8TBY0 533 aaKnown RBP21.25■□□□□ 0.99
CCND1-205ENST00000542367 ZNF428Q96B54 188 aa21.25■□□□□ 0.99
CCND1-205ENST00000542367 CRAMP1Q96RY5 1269 aa21.25■□□□□ 0.99
CCND1-205ENST00000542367 TRMT112Q9UI30 125 aaKnown RBP21.25■□□□□ 0.99
CCND1-205ENST00000542367 RNF123Q5XPI4 1314 aa21.25■□□□□ 0.99
CCND1-205ENST00000542367 VEGFAP15692 232 aaPredicted RBP21.24■□□□□ 0.99
CCND1-205ENST00000542367 ZNF277Q9NRM2 450 aaPredicted RBP21.24■□□□□ 0.99
CCND1-205ENST00000542367 HCLS1P14317 486 aaPredicted RBP21.23■□□□□ 0.99
CCND1-205ENST00000542367 TSR2Q969E8 191 aaKnown RBP21.23■□□□□ 0.99
CCND1-205ENST00000542367 PHAXQ9H814 394 aaKnown RBP21.23■□□□□ 0.99
CCND1-205ENST00000542367 ATP5J2-PTCD1G3V325 749 aa21.22■□□□□ 0.99
CCND1-205ENST00000542367 CC2D2BQ6DHV5 1058 aa21.22■□□□□ 0.99
CCND1-205ENST00000542367 TSPYL6Q8N831 410 aa21.22■□□□□ 0.99
CCND1-205ENST00000542367 ISCA1Q9BUE6 129 aa21.22■□□□□ 0.99
CCND1-205ENST00000542367 SH3TC1Q8TE82 1336 aa21.22■□□□□ 0.99
CCND1-205ENST00000542367 CEP350Q5VT06 3117 aa21.21■□□□□ 0.99
CCND1-205ENST00000542367 TCERG1O14776 1098 aaKnown RBP21.21■□□□□ 0.99
CCND1-205ENST00000542367 NCBP3Q53F19 620 aaKnown RBP21.21■□□□□ 0.99
CCND1-205ENST00000542367 RIC3Q7Z5B4 369 aa21.21■□□□□ 0.99
CCND1-205ENST00000542367 SALL2Q9Y467 1007 aaPredicted RBP21.21■□□□□ 0.99
CCND1-205ENST00000542367 POTECB2RU33 542 aa21.2■□□□□ 0.98
CCND1-205ENST00000542367 PPEF1O14829 653 aaPredicted RBP21.2■□□□□ 0.98
CCND1-205ENST00000542367 DDNO94850 711 aaPredicted RBP21.2■□□□□ 0.98
CCND1-205ENST00000542367 CCDC30Q5VVM6 783 aa21.2■□□□□ 0.98
CCND1-205ENST00000542367 CHMP4AQ9BY43 222 aa21.2■□□□□ 0.98
CCND1-205ENST00000542367 IARSP41252 1262 aaKnown RBP21.19■□□□□ 0.98
CCND1-205ENST00000542367 GOLGA2Q08379 1002 aa21.19■□□□□ 0.98
CCND1-205ENST00000542367 FSTL1Q12841 308 aa21.19■□□□□ 0.98
CCND1-205ENST00000542367 PSMD1Q99460 953 aa21.19■□□□□ 0.98
CCND1-205ENST00000542367 SNED1Q8TER0 1413 aa21.19■□□□□ 0.98
CCND1-205ENST00000542367 GRIPAP1Q4V328 841 aa21.18■□□□□ 0.98
CCND1-205ENST00000542367 SLC51AQ86UW1 340 aa21.18■□□□□ 0.98
CCND1-205ENST00000542367 FAM9BQ8IZU0 186 aa21.18■□□□□ 0.98
CCND1-205ENST00000542367 FAM89AQ96GI7 184 aa21.18■□□□□ 0.98
CCND1-205ENST00000542367 ABCC4O15439 1325 aa21.18■□□□□ 0.98
CCND1-205ENST00000542367 IL16Q14005 1332 aa21.18■□□□□ 0.98
CCND1-205ENST00000542367 TRIM28Q13263 835 aaKnown RBP21.17■□□□□ 0.98
CCND1-205ENST00000542367 WDR90Q96KV7 1748 aa21.17■□□□□ 0.98
CCND1-205ENST00000542367 APLP1P51693 650 aa21.16■□□□□ 0.98
CCND1-205ENST00000542367 RTL5Q5HYW3 569 aaPredicted RBP21.16■□□□□ 0.98
CCND1-205ENST00000542367 DDX46Q7L014 1031 aaKnown RBP21.16■□□□□ 0.98
CCND1-205ENST00000542367 SMC1BQ8NDV3 1235 aa21.16■□□□□ 0.98
CCND1-205ENST00000542367 TMX4Q9H1E5 349 aaPredicted RBP21.16■□□□□ 0.98
CCND1-205ENST00000542367 ATP6V0A2Q9Y487 856 aa21.16■□□□□ 0.98
CCND1-205ENST00000542367 LAMB2P55268 1798 aa21.15■□□□□ 0.98
CCND1-205ENST00000542367 BBOX1O75936 387 aa21.15■□□□□ 0.98
CCND1-205ENST00000542367 TWISTNBQ3B726 338 aaPredicted RBP21.15■□□□□ 0.98
CCND1-205ENST00000542367 MYD88Q99836 296 aa21.15■□□□□ 0.98
CCND1-205ENST00000542367 DDX58O95786 925 aaKnown RBP21.14■□□□□ 0.97
CCND1-205ENST00000542367 WDR63Q8IWG1 891 aa21.14■□□□□ 0.97
CCND1-205ENST00000542367 JDP2Q8WYK2 163 aa21.14■□□□□ 0.97
CCND1-205ENST00000542367 ZNF541Q9H0D2 1346 aa21.13■□□□□ 0.97
CCND1-205ENST00000542367 FZD9O00144 591 aa21.13■□□□□ 0.97
CCND1-205ENST00000542367 GRAPQ13588 217 aa21.13■□□□□ 0.97
CCND1-205ENST00000542367 GRAPLQ8TC17 118 aaPredicted RBP21.13■□□□□ 0.97
CCND1-205ENST00000542367 STK31Q9BXU1 1019 aa21.13■□□□□ 0.97
CCND1-205ENST00000542367 IRS4O14654 1257 aaPredicted RBP21.12■□□□□ 0.97
CCND1-205ENST00000542367 SF3B3Q15393 1217 aaKnown RBP21.12■□□□□ 0.97
CCND1-205ENST00000542367 SP8Q8IXZ3 490 aa21.12■□□□□ 0.97
CCND1-205ENST00000542367 METTL22Q9BUU2 404 aaPredicted RBP21.12■□□□□ 0.97
CCND1-205ENST00000542367 FANCIQ9NVI1 1328 aa21.11■□□□□ 0.97
CCND1-205ENST00000542367 LARGE2Q8N3Y3 721 aa21.11■□□□□ 0.97
CCND1-205ENST00000542367 ZBTB38Q8NAP3 1195 aaPredicted RBP21.11■□□□□ 0.97
CCND1-205ENST00000542367 CCDC191Q8NCU4 936 aa21.11■□□□□ 0.97
CCND1-205ENST00000542367 L3MBTL3Q96JM7 780 aaPredicted RBP21.11■□□□□ 0.97
CCND1-205ENST00000542367 MAP3K2Q9Y2U5 619 aa21.11■□□□□ 0.97
CCND1-205ENST00000542367 DDX60Q8IY21 1712 aaKnown RBP21.11■□□□□ 0.97
CCND1-205ENST00000542367 TAF1P21675 1872 aa21.1■□□□□ 0.97
CCND1-205ENST00000542367 SLC4A2P04920 1241 aa21.1■□□□□ 0.97
CCND1-205ENST00000542367 KSR2Q6VAB6 950 aa21.1■□□□□ 0.97
CCND1-205ENST00000542367 PI4KAP2A4QPH2 592 aa21.09■□□□□ 0.97
CCND1-205ENST00000542367 IQCA1LA6NCM1 817 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms