RNA–Protein interactions for RNA: ENST00000542362.1

POLE-218, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 4

Gene POLE, Length 508 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-218	ENST00000542362	NCBP3	Q53F19	620 aa	Known RBP	11.74	□□□□□ -0.53
POLE-218	ENST00000542362	NLRP10	Q86W26	655 aa		11.74	□□□□□ -0.53
POLE-218	ENST00000542362	ZNF622	Q969S3	477 aa	Known RBP eCLIP	11.74	□□□□□ -0.53	1e-6	■□□□□ 10.9
POLE-218	ENST00000542362	MYD88	Q99836	296 aa		11.74	□□□□□ -0.53
POLE-218	ENST00000542362	LTBP1	Q14766	1721 aa		11.74	□□□□□ -0.53
POLE-218	ENST00000542362	HCLS1	P14317	486 aa	Predicted RBP	11.73	□□□□□ -0.53
POLE-218	ENST00000542362	COL4A5	P29400	1685 aa		11.73	□□□□□ -0.53
POLE-218	ENST00000542362	SLFN5	Q08AF3	891 aa		11.73	□□□□□ -0.53
POLE-218	ENST00000542362	TCIRG1	Q13488	830 aa		11.73	□□□□□ -0.53
POLE-218	ENST00000542362	CCDC30	Q5VVM6	783 aa		11.73	□□□□□ -0.53
POLE-218	ENST00000542362	ANKRD13D	Q6ZTN6	518 aa		11.73	□□□□□ -0.53
POLE-218	ENST00000542362	PLBD2	Q8NHP8	589 aa		11.73	□□□□□ -0.53
POLE-218	ENST00000542362	BRIP1	Q9BX63	1249 aa		11.73	□□□□□ -0.53
POLE-218	ENST00000542362	HYPK	Q9NX55	129 aa		11.73	□□□□□ -0.53
POLE-218	ENST00000542362	PIM2	Q9P1W9	311 aa		11.73	□□□□□ -0.53
POLE-218	ENST00000542362	IBTK	Q9P2D0	1353 aa	Predicted RBP	11.72	□□□□□ -0.53
POLE-218	ENST00000542362		F6X3S4	739 aa		11.72	□□□□□ -0.53
POLE-218	ENST00000542362		H0YIN7	160 aa		11.72	□□□□□ -0.53
POLE-218	ENST00000542362	SLC4A2	P04920	1241 aa		11.72	□□□□□ -0.53
POLE-218	ENST00000542362	SRGN	P10124	158 aa		11.72	□□□□□ -0.53
POLE-218	ENST00000542362	GOLGA2	Q08379	1002 aa		11.72	□□□□□ -0.53
POLE-218	ENST00000542362	ISCA1	Q9BUE6	129 aa		11.72	□□□□□ -0.53
POLE-218	ENST00000542362	BCL2L13	Q9BXK5	485 aa		11.72	□□□□□ -0.53
POLE-218	ENST00000542362	MAP3K2	Q9Y2U5	619 aa		11.72	□□□□□ -0.53
POLE-218	ENST00000542362	RIC1	Q4ADV7	1423 aa		11.71	□□□□□ -0.53
POLE-218	ENST00000542362	PI4KAP2	A4QPH2	592 aa		11.71	□□□□□ -0.53
POLE-218	ENST00000542362	C21orf2	O43822	256 aa		11.71	□□□□□ -0.53
POLE-218	ENST00000542362	CWF19L2	Q2TBE0	894 aa	Known RBP	11.71	□□□□□ -0.53
POLE-218	ENST00000542362	DALRD3	Q5D0E6	543 aa	Known RBP	11.71	□□□□□ -0.53
POLE-218	ENST00000542362	ARHGAP27	Q6ZUM4	889 aa		11.71	□□□□□ -0.53
POLE-218	ENST00000542362	RIC3	Q7Z5B4	369 aa		11.71	□□□□□ -0.53
POLE-218	ENST00000542362	PI4KAP1	Q8N8J0	262 aa		11.71	□□□□□ -0.53
POLE-218	ENST00000542362	FAM89A	Q96GI7	184 aa		11.71	□□□□□ -0.53
POLE-218	ENST00000542362	ZNF646	O15015	1829 aa	Predicted RBP	11.71	□□□□□ -0.54
POLE-218	ENST00000542362	DUOX1	Q9NRD9	1551 aa		11.71	□□□□□ -0.54
POLE-218	ENST00000542362	SNED1	Q8TER0	1413 aa		11.7	□□□□□ -0.54
POLE-218	ENST00000542362	NFKBIE	O00221	500 aa		11.7	□□□□□ -0.54
POLE-218	ENST00000542362	IGKV5-2	P06315	115 aa		11.7	□□□□□ -0.54
POLE-218	ENST00000542362	GTF2E1	P29083	439 aa	Predicted RBP	11.7	□□□□□ -0.54
POLE-218	ENST00000542362	PDE6B	P35913	854 aa		11.7	□□□□□ -0.54
POLE-218	ENST00000542362	HNRNPU	Q00839	825 aa	Known RBP eCLIP	11.7	□□□□□ -0.54
POLE-218	ENST00000542362	FLII	Q13045	1269 aa		11.7	□□□□□ -0.54
POLE-218	ENST00000542362	PRPF40B	Q6NWY9	871 aa	Known RBP	11.7	□□□□□ -0.54
POLE-218	ENST00000542362	TPTE2	Q6XPS3	522 aa		11.7	□□□□□ -0.54
POLE-218	ENST00000542362	UTP14A	Q9BVJ6	771 aa	Known RBP	11.7	□□□□□ -0.54
POLE-218	ENST00000542362	SCN9A	Q15858	1988 aa		11.69	□□□□□ -0.54
POLE-218	ENST00000542362	RGL2	O15211	777 aa		11.69	□□□□□ -0.54
POLE-218	ENST00000542362	TRMT2A	Q8IZ69	625 aa	Known RBP	11.69	□□□□□ -0.54
POLE-218	ENST00000542362	TTLL6	Q8N841	843 aa		11.69	□□□□□ -0.54
POLE-218	ENST00000542362	ZNF526	Q8TF50	670 aa	Predicted RBP	11.69	□□□□□ -0.54
POLE-218	ENST00000542362	STK31	Q9BXU1	1019 aa		11.69	□□□□□ -0.54
POLE-218	ENST00000542362	NYX	Q9GZU5	481 aa		11.69	□□□□□ -0.54
POLE-218	ENST00000542362	MYH16	Q9H6N6	1097 aa		11.69	□□□□□ -0.54
POLE-218	ENST00000542362	TRMT112	Q9UI30	125 aa	Known RBP	11.69	□□□□□ -0.54
POLE-218	ENST00000542362	KLRG2	A4D1S0	409 aa	Predicted RBP	11.68	□□□□□ -0.54
POLE-218	ENST00000542362	GRIN3B	O60391	1043 aa		11.68	□□□□□ -0.54
POLE-218	ENST00000542362	PARP10	Q53GL7	1025 aa		11.68	□□□□□ -0.54
POLE-218	ENST00000542362	PPP1R42	Q7Z4L9	355 aa		11.68	□□□□□ -0.54
POLE-218	ENST00000542362	MASTL	Q96GX5	879 aa		11.68	□□□□□ -0.54
POLE-218	ENST00000542362	CCDC85A	Q96PX6	553 aa	Predicted RBP	11.68	□□□□□ -0.54
POLE-218	ENST00000542362	METTL22	Q9BUU2	404 aa	Predicted RBP	11.68	□□□□□ -0.54
POLE-218	ENST00000542362	PSME4	Q14997	1843 aa		11.67	□□□□□ -0.54
POLE-218	ENST00000542362	ABCC4	O15439	1325 aa		11.67	□□□□□ -0.54
POLE-218	ENST00000542362		E9PSI1	815 aa		11.67	□□□□□ -0.54
POLE-218	ENST00000542362	FKBP5	Q13451	457 aa	Predicted RBP	11.67	□□□□□ -0.54
POLE-218	ENST00000542362	CRY2	Q49AN0	593 aa		11.67	□□□□□ -0.54
POLE-218	ENST00000542362	HSP90AB3P	Q58FF7	597 aa		11.67	□□□□□ -0.54
POLE-218	ENST00000542362	STYK1	Q6J9G0	422 aa		11.67	□□□□□ -0.54
POLE-218	ENST00000542362	KSR2	Q6VAB6	950 aa		11.67	□□□□□ -0.54
POLE-218	ENST00000542362	MRPL50	Q8N5N7	158 aa	Known RBP	11.67	□□□□□ -0.54
POLE-218	ENST00000542362	SSH1	Q8WYL5	1049 aa		11.67	□□□□□ -0.54
POLE-218	ENST00000542362	TNN	Q9UQP3	1299 aa		11.67	□□□□□ -0.54
POLE-218	ENST00000542362	SH3TC1	Q8TE82	1336 aa		11.66	□□□□□ -0.54
POLE-218	ENST00000542362	NPR1	P16066	1061 aa		11.66	□□□□□ -0.54
POLE-218	ENST00000542362	C9orf131	Q5VYM1	1079 aa		11.66	□□□□□ -0.54
POLE-218	ENST00000542362	C7orf43	Q8WVR3	580 aa		11.66	□□□□□ -0.54
POLE-218	ENST00000542362	NEURL1B	A8MQ27	555 aa		11.65	□□□□□ -0.54
POLE-218	ENST00000542362	SEC31B	Q9NQW1	1179 aa		11.65	□□□□□ -0.54
POLE-218	ENST00000542362	RNF181	Q9P0P0	153 aa		11.65	□□□□□ -0.54
POLE-218	ENST00000542362	IRS4	O14654	1257 aa	Predicted RBP	11.64	□□□□□ -0.55
POLE-218	ENST00000542362	SLC10A5	Q5PT55	438 aa		11.64	□□□□□ -0.55
POLE-218	ENST00000542362	DNAAF4	Q8WXU2	420 aa		11.64	□□□□□ -0.55
POLE-218	ENST00000542362	RPGR	Q92834	1020 aa	Known RBP	11.64	□□□□□ -0.55
POLE-218	ENST00000542362	CELF1	Q92879	486 aa	Known RBP	11.64	□□□□□ -0.55
POLE-218	ENST00000542362	CNKSR1	Q969H4	720 aa		11.64	□□□□□ -0.55
POLE-218	ENST00000542362	CWC25	Q9NXE8	425 aa	Predicted RBP	11.64	□□□□□ -0.55
POLE-218	ENST00000542362	MYH13	Q9UKX3	1938 aa		11.64	□□□□□ -0.55
POLE-218	ENST00000542362	WDR90	Q96KV7	1748 aa		11.63	□□□□□ -0.55
POLE-218	ENST00000542362	DDX58	O95786	925 aa	Known RBP	11.63	□□□□□ -0.55
POLE-218	ENST00000542362	HSPA6	P17066	643 aa		11.63	□□□□□ -0.55
POLE-218	ENST00000542362	CASP7	P55210	303 aa		11.63	□□□□□ -0.55
POLE-218	ENST00000542362	UBE3B	Q7Z3V4	1068 aa		11.63	□□□□□ -0.55
POLE-218	ENST00000542362	NLRP3	Q96P20	1036 aa		11.63	□□□□□ -0.55
POLE-218	ENST00000542362	PPEF1	O14829	653 aa	Predicted RBP	11.62	□□□□□ -0.55
POLE-218	ENST00000542362	PCCA	P05165	728 aa	Predicted RBP	11.62	□□□□□ -0.55
POLE-218	ENST00000542362	HOXA10	P31260	410 aa	Predicted RBP	11.62	□□□□□ -0.55
POLE-218	ENST00000542362	TRIM28	Q13263	835 aa	Known RBP	11.62	□□□□□ -0.55
POLE-218	ENST00000542362	BEND3	Q5T5X7	828 aa		11.62	□□□□□ -0.55
POLE-218	ENST00000542362	SLC4A10	Q6U841	1118 aa		11.62	□□□□□ -0.55
POLE-218	ENST00000542362	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	11.62	□□□□□ -0.55

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