RNA–Protein interactions for RNA: ENST00000542337.5

DDB1-220, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-220ENST00000542337 CHPF2Q9P2E5 772 aa26.28■■□□□ 1.8
DDB1-220ENST00000542337 DBF4Q9UBU7 674 aaPredicted RBP26.28■■□□□ 1.8
DDB1-220ENST00000542337 NUP98P52948 1817 aa26.28■■□□□ 1.8
DDB1-220ENST00000542337 HOXA10P31260 410 aaPredicted RBP26.27■■□□□ 1.8
DDB1-220ENST00000542337 DUSP27Q5VZP5 1158 aa26.27■■□□□ 1.8
DDB1-220ENST00000542337 MBIPQ9NS73 344 aa26.27■■□□□ 1.8
DDB1-220ENST00000542337 IFT57Q9NWB7 429 aa26.27■■□□□ 1.8
DDB1-220ENST00000542337 RIC1Q4ADV7 1423 aa26.26■■□□□ 1.79
DDB1-220ENST00000542337 RNF123Q5XPI4 1314 aa26.26■■□□□ 1.79
DDB1-220ENST00000542337 ZNF316A6NFI3 1004 aaPredicted RBP26.26■■□□□ 1.79
DDB1-220ENST00000542337 TCIRG1Q13488 830 aa26.26■■□□□ 1.79
DDB1-220ENST00000542337 TMX4Q9H1E5 349 aaPredicted RBP26.26■■□□□ 1.79
DDB1-220ENST00000542337 GRIPAP1Q4V328 841 aa26.25■■□□□ 1.79
DDB1-220ENST00000542337 CRAMP1Q96RY5 1269 aa26.25■■□□□ 1.79
DDB1-220ENST00000542337 HYPKQ9NX55 129 aa26.25■■□□□ 1.79
DDB1-220ENST00000542337 FER1L6Q2WGJ9 1857 aa26.25■■□□□ 1.79
DDB1-220ENST00000542337 TNRC6CQ9HCJ0 1690 aaKnown RBP26.25■■□□□ 1.79
DDB1-220ENST00000542337 CEP350Q5VT06 3117 aa26.24■■□□□ 1.79
DDB1-220ENST00000542337 SLC10A5Q5PT55 438 aa26.24■■□□□ 1.79
DDB1-220ENST00000542337 CHMP4AQ9BY43 222 aa26.24■■□□□ 1.79
DDB1-220ENST00000542337 ZNF277Q9NRM2 450 aaPredicted RBP26.24■■□□□ 1.79
DDB1-220ENST00000542337 ANP32CO43423 234 aa26.23■■□□□ 1.79
DDB1-220ENST00000542337 ZNF853P0CG23 659 aa26.23■■□□□ 1.79
DDB1-220ENST00000542337 OLFM4Q6UX06 510 aa26.23■■□□□ 1.79
DDB1-220ENST00000542337 ANKRD13DQ6ZTN6 518 aa26.23■■□□□ 1.79
DDB1-220ENST00000542337 NLRP10Q86W26 655 aa26.23■■□□□ 1.79
DDB1-220ENST00000542337 SYNE4Q8N205 404 aa26.23■■□□□ 1.79
DDB1-220ENST00000542337 PLBD2Q8NHP8 589 aa26.23■■□□□ 1.79
DDB1-220ENST00000542337 ARFGEF2Q9Y6D5 1785 aa26.23■■□□□ 1.79
DDB1-220ENST00000542337 TRMT112Q9UI30 125 aaKnown RBP26.22■■□□□ 1.79
DDB1-220ENST00000542337 PSMD1Q99460 953 aa26.21■■□□□ 1.79
DDB1-220ENST00000542337 TIAM2Q8IVF5 1701 aa26.21■■□□□ 1.79
DDB1-220ENST00000542337 CCDC88AQ3V6T2 1871 aa26.21■■□□□ 1.79
DDB1-220ENST00000542337 CACNA1SQ13698 1873 aa26.2■■□□□ 1.78
DDB1-220ENST00000542337 DDNO94850 711 aaPredicted RBP26.2■■□□□ 1.78
DDB1-220ENST00000542337 IARSP41252 1262 aaKnown RBP26.2■■□□□ 1.78
DDB1-220ENST00000542337 JDP2Q8WYK2 163 aa26.2■■□□□ 1.78
DDB1-220ENST00000542337 SH3TC1Q8TE82 1336 aa26.19■■□□□ 1.78
DDB1-220ENST00000542337 PPEF1O14829 653 aaPredicted RBP26.19■■□□□ 1.78
DDB1-220ENST00000542337 IQCA1LA6NCM1 817 aa26.18■■□□□ 1.78
DDB1-220ENST00000542337 POTECB2RU33 542 aa26.17■■□□□ 1.78
DDB1-220ENST00000542337 ELL2O00472 640 aaPredicted RBP26.17■■□□□ 1.78
DDB1-220ENST00000542337 TCERG1O14776 1098 aaKnown RBP26.17■■□□□ 1.78
DDB1-220ENST00000542337 CCDC184Q52MB2 194 aa26.17■■□□□ 1.78
DDB1-220ENST00000542337 C3orf67Q6ZVT6 689 aa26.17■■□□□ 1.78
DDB1-220ENST00000542337 MRS2Q9HD23 443 aa26.17■■□□□ 1.78
DDB1-220ENST00000542337 HCLS1P14317 486 aaPredicted RBP26.16■■□□□ 1.78
DDB1-220ENST00000542337 GOLGA2Q08379 1002 aa26.16■■□□□ 1.78
DDB1-220ENST00000542337 DDX46Q7L014 1031 aaKnown RBP26.16■■□□□ 1.78
DDB1-220ENST00000542337 DICER1Q9UPY3 1922 aaKnown RBP26.16■■□□□ 1.78
DDB1-220ENST00000542337 BBOX1O75936 387 aa26.15■■□□□ 1.78
DDB1-220ENST00000542337 RIC3Q7Z5B4 369 aa26.15■■□□□ 1.78
DDB1-220ENST00000542337 WDR90Q96KV7 1748 aa26.14■■□□□ 1.77
DDB1-220ENST00000542337 CCDC27Q2M243 656 aa26.13■■□□□ 1.77
DDB1-220ENST00000542337 CCDC30Q5VVM6 783 aa26.13■■□□□ 1.77
DDB1-220ENST00000542337 ISCA1Q9BUE6 129 aa26.13■■□□□ 1.77
DDB1-220ENST00000542337 ATP6V0A2Q9Y487 856 aa26.13■■□□□ 1.77
DDB1-220ENST00000542337 ATP5J2-PTCD1G3V325 749 aa26.12■■□□□ 1.77
DDB1-220ENST00000542337 FZD9O00144 591 aa26.12■■□□□ 1.77
DDB1-220ENST00000542337 EIF6P56537 245 aaKnown RBP26.12■■□□□ 1.77
DDB1-220ENST00000542337 LARGE2Q8N3Y3 721 aa26.12■■□□□ 1.77
DDB1-220ENST00000542337 C8orf58Q8NAV2 365 aa26.12■■□□□ 1.77
DDB1-220ENST00000542337 L3MBTL3Q96JM7 780 aaPredicted RBP26.12■■□□□ 1.77
DDB1-220ENST00000542337 ABCC4O15439 1325 aa26.12■■□□□ 1.77
DDB1-220ENST00000542337 DNAJC5GQ8N7S2 189 aa26.11■■□□□ 1.77
DDB1-220ENST00000542337 SUPT20HQ8NEM7 779 aa26.11■■□□□ 1.77
DDB1-220ENST00000542337 DDX58O95786 925 aaKnown RBP26.1■■□□□ 1.77
DDB1-220ENST00000542337 TRIM28Q13263 835 aaKnown RBP26.1■■□□□ 1.77
DDB1-220ENST00000542337 CHADLQ6NUI6 762 aa26.1■■□□□ 1.77
DDB1-220ENST00000542337 ZNF541Q9H0D2 1346 aa26.1■■□□□ 1.77
DDB1-220ENST00000542337 HSP90B1P14625 803 aaKnown RBP26.09■■□□□ 1.77
DDB1-220ENST00000542337 WWC1Q8IX03 1113 aa26.09■■□□□ 1.77
DDB1-220ENST00000542337 SP8Q8IXZ3 490 aa26.09■■□□□ 1.77
DDB1-220ENST00000542337 GPC2Q8N158 579 aa26.09■■□□□ 1.77
DDB1-220ENST00000542337 ZNF428Q96B54 188 aa26.09■■□□□ 1.77
DDB1-220ENST00000542337 FAM89AQ96GI7 184 aa26.09■■□□□ 1.77
DDB1-220ENST00000542337 VPS33BQ9H267 617 aa26.09■■□□□ 1.77
DDB1-220ENST00000542337 GRAPQ13588 217 aa26.08■■□□□ 1.77
DDB1-220ENST00000542337 NCBP3Q53F19 620 aaKnown RBP26.08■■□□□ 1.77
DDB1-220ENST00000542337 TMC4Q7Z404 712 aa26.08■■□□□ 1.77
DDB1-220ENST00000542337 NIM1KQ8IY84 436 aa26.08■■□□□ 1.77
DDB1-220ENST00000542337 GRAPLQ8TC17 118 aaPredicted RBP26.08■■□□□ 1.77
DDB1-220ENST00000542337 TAF1DQ9H5J8 278 aaPredicted RBP26.08■■□□□ 1.77
DDB1-220ENST00000542337 PHAXQ9H814 394 aaKnown RBP26.08■■□□□ 1.77
DDB1-220ENST00000542337 HACL1Q9UJ83 578 aa26.08■■□□□ 1.77
DDB1-220ENST00000542337 SNED1Q8TER0 1413 aa26.07■■□□□ 1.76
DDB1-220ENST00000542337 HTRA3P83110 453 aa26.07■■□□□ 1.76
DDB1-220ENST00000542337 DPP8Q6V1X1 898 aaPredicted RBP26.07■■□□□ 1.76
DDB1-220ENST00000542337 ANKRD36CQ5JPF3 1778 aa26.06■■□□□ 1.76
DDB1-220ENST00000542337 PPIP5K2O43314 1243 aa26.06■■□□□ 1.76
DDB1-220ENST00000542337 LDHDQ86WU2 507 aa26.06■■□□□ 1.76
DDB1-220ENST00000542337 MPNDQ8N594 471 aa26.06■■□□□ 1.76
DDB1-220ENST00000542337 STK31Q9BXU1 1019 aa26.06■■□□□ 1.76
DDB1-220ENST00000542337 GJA3Q9Y6H8 435 aa26.06■■□□□ 1.76
DDB1-220ENST00000542337 IRS4O14654 1257 aaPredicted RBP26.05■■□□□ 1.76
DDB1-220ENST00000542337 TSR2Q969E8 191 aaKnown RBP26.05■■□□□ 1.76
DDB1-220ENST00000542337 KLRG1Q96E93 195 aa26.05■■□□□ 1.76
DDB1-220ENST00000542337 IL16Q14005 1332 aa26.05■■□□□ 1.76
DDB1-220ENST00000542337 SF3B3Q15393 1217 aaKnown RBP26.04■■□□□ 1.76
DDB1-220ENST00000542337 EAPPQ56P03 285 aaPredicted RBP26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms