RNA–Protein interactions for RNA: ENST00000542242.1

DDX11-219, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 795 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-219ENST00000542242 BEND3Q5T5X7 828 aa18.26■□□□□ 0.51
DDX11-219ENST00000542242 NBPF10Q6P3W6 841 aaKnown RBP18.26■□□□□ 0.51
DDX11-219ENST00000542242 NBPF15Q8N660 670 aa18.26■□□□□ 0.51
DDX11-219ENST00000542242 XAGE3Q8WTP9 111 aa18.26■□□□□ 0.51
DDX11-219ENST00000542242 RBM19Q9Y4C8 960 aaKnown RBP18.25■□□□□ 0.51
DDX11-219ENST00000542242 NUP98P52948 1817 aa18.24■□□□□ 0.51
DDX11-219ENST00000542242 HMMRO75330 724 aa18.24■□□□□ 0.51
DDX11-219ENST00000542242 ALDH1L1O75891 902 aa18.24■□□□□ 0.51
DDX11-219ENST00000542242 UBTFL1P0CB47 393 aaPredicted RBP18.24■□□□□ 0.51
DDX11-219ENST00000542242 IL6STP40189 918 aaPredicted RBP18.24■□□□□ 0.51
DDX11-219ENST00000542242 MSL1Q68DK7 614 aa18.24■□□□□ 0.51
DDX11-219ENST00000542242 COPS6Q7L5N1 327 aa18.24■□□□□ 0.51
DDX11-219ENST00000542242 RIC3Q7Z5B4 369 aa18.24■□□□□ 0.51
DDX11-219ENST00000542242 USP44Q9H0E7 712 aa18.24■□□□□ 0.51
DDX11-219ENST00000542242 BCL2L12Q9HB09 334 aa18.24■□□□□ 0.51
DDX11-219ENST00000542242 ARFGEF2Q9Y6D5 1785 aa18.23■□□□□ 0.51
DDX11-219ENST00000542242 PIP4K2AP48426 406 aaPredicted RBP18.23■□□□□ 0.51
DDX11-219ENST00000542242 NUCB1Q02818 461 aa18.23■□□□□ 0.51
DDX11-219ENST00000542242 LRP10Q7Z4F1 713 aa18.23■□□□□ 0.51
DDX11-219ENST00000542242 SRP68Q9UHB9 627 aaKnown RBP18.23■□□□□ 0.51
DDX11-219ENST00000542242 PDE4AP27815 886 aa18.22■□□□□ 0.51
DDX11-219ENST00000542242 ARXQ96QS3 562 aa18.22■□□□□ 0.51
DDX11-219ENST00000542242 SYT17Q9BSW7 474 aa18.22■□□□□ 0.51
DDX11-219ENST00000542242 NARFQ9UHQ1 456 aa18.22■□□□□ 0.51
DDX11-219ENST00000542242 BRCA1P38398 1863 aaKnown RBP18.22■□□□□ 0.51
DDX11-219ENST00000542242 LINS1Q8NG48 757 aa18.21■□□□□ 0.51
DDX11-219ENST00000542242 DCTPP1Q9H773 170 aa18.21■□□□□ 0.51
DDX11-219ENST00000542242 LRRFIP2Q9Y608 721 aaKnown RBP18.21■□□□□ 0.51
DDX11-219ENST00000542242 TM4SF1P30408 202 aa18.2■□□□□ 0.5
DDX11-219ENST00000542242 RFC4P35249 363 aa18.2■□□□□ 0.5
DDX11-219ENST00000542242 NEXNQ0ZGT2 675 aa18.2■□□□□ 0.5
DDX11-219ENST00000542242 ANKRD45Q5TZF3 282 aa18.2■□□□□ 0.5
DDX11-219ENST00000542242 ANKRD13DQ6ZTN6 518 aa18.2■□□□□ 0.5
DDX11-219ENST00000542242 CHD1LQ86WJ1 897 aa18.2■□□□□ 0.5
DDX11-219ENST00000542242 CHD4Q14839 1912 aa18.19■□□□□ 0.5
DDX11-219ENST00000542242 ATP8B2P98198 1209 aa18.19■□□□□ 0.5
DDX11-219ENST00000542242 METTL22Q9BUU2 404 aaPredicted RBP18.19■□□□□ 0.5
DDX11-219ENST00000542242 BACH2Q9BYV9 841 aa18.19■□□□□ 0.5
DDX11-219ENST00000542242 LNPKQ9C0E8 428 aa18.19■□□□□ 0.5
DDX11-219ENST00000542242 FAM161AQ3B820 660 aa18.18■□□□□ 0.5
DDX11-219ENST00000542242 USPL1Q5W0Q7 1092 aa18.18■□□□□ 0.5
DDX11-219ENST00000542242 NLGN1Q8N2Q7 840 aa18.18■□□□□ 0.5
DDX11-219ENST00000542242 FHDC1Q9C0D6 1143 aaPredicted RBP18.18■□□□□ 0.5
DDX11-219ENST00000542242 C9orf78Q9NZ63 289 aaPredicted RBP18.18■□□□□ 0.5
DDX11-219ENST00000542242 HDAC5Q9UQL6 1122 aa18.18■□□□□ 0.5
DDX11-219ENST00000542242 ANKRD31Q8N7Z5 1873 aa18.18■□□□□ 0.5
DDX11-219ENST00000542242 ANKRD36CQ5JPF3 1778 aa18.17■□□□□ 0.5
DDX11-219ENST00000542242 CAMTA2O94983 1202 aa18.17■□□□□ 0.5
DDX11-219ENST00000542242 POLD1P28340 1107 aa18.17■□□□□ 0.5
DDX11-219ENST00000542242 DDR1Q08345 913 aa18.17■□□□□ 0.5
DDX11-219ENST00000542242 GPR162Q16538 588 aa18.17■□□□□ 0.5
DDX11-219ENST00000542242 CWF19L2Q2TBE0 894 aaKnown RBP18.17■□□□□ 0.5
DDX11-219ENST00000542242 PLBD2Q8NHP8 589 aa18.17■□□□□ 0.5
DDX11-219ENST00000542242 MYD88Q99836 296 aa18.17■□□□□ 0.5
DDX11-219ENST00000542242 ZBTB47Q9UFB7 747 aaPredicted RBP18.17■□□□□ 0.5
DDX11-219ENST00000542242 IBTKQ9P2D0 1353 aaPredicted RBP18.17■□□□□ 0.5
DDX11-219ENST00000542242 C10orf71Q711Q0 1435 aa18.16■□□□□ 0.5
DDX11-219ENST00000542242 A0A087WZG4 1122 aa18.16■□□□□ 0.5
DDX11-219ENST00000542242 MMP10P09238 476 aa18.16■□□□□ 0.5
DDX11-219ENST00000542242 NBPF7P0C2Y1 421 aaPredicted RBP18.16■□□□□ 0.5
DDX11-219ENST00000542242 DLEC1Q9Y238 1755 aa18.15■□□□□ 0.5
DDX11-219ENST00000542242 RGL2O15211 777 aa18.15■□□□□ 0.5
DDX11-219ENST00000542242 IGKV5-2P06315 115 aa18.15■□□□□ 0.5
DDX11-219ENST00000542242 PNMA6EA0A0J9YXQ4 647 aa18.14■□□□□ 0.49
DDX11-219ENST00000542242 NEURL1BA8MQ27 555 aa18.14■□□□□ 0.49
DDX11-219ENST00000542242 GRM8O00222 908 aa18.14■□□□□ 0.49
DDX11-219ENST00000542242 POLRMTO00411 1230 aaKnown RBP18.14■□□□□ 0.49
DDX11-219ENST00000542242 TTLL7Q6ZT98 887 aa18.14■□□□□ 0.49
DDX11-219ENST00000542242 TBC1D2BQ9UPU7 963 aa18.14■□□□□ 0.49
DDX11-219ENST00000542242 UTYO14607 1347 aa18.14■□□□□ 0.49
DDX11-219ENST00000542242 ZPR1O75312 459 aa18.13■□□□□ 0.49
DDX11-219ENST00000542242 NFIXQ14938 502 aa18.13■□□□□ 0.49
DDX11-219ENST00000542242 C8orf34Q49A92 452 aa18.13■□□□□ 0.49
DDX11-219ENST00000542242 GCKRQ14397 625 aa18.12■□□□□ 0.49
DDX11-219ENST00000542242 PPP1R42Q7Z4L9 355 aa18.12■□□□□ 0.49
DDX11-219ENST00000542242 DZIP3Q86Y13 1208 aaKnown RBP18.12■□□□□ 0.49
DDX11-219ENST00000542242 NLGN2Q8NFZ4 835 aa18.12■□□□□ 0.49
DDX11-219ENST00000542242 SSH3Q8TE77 659 aa18.12■□□□□ 0.49
DDX11-219ENST00000542242 CD2APQ9Y5K6 639 aa18.12■□□□□ 0.49
DDX11-219ENST00000542242 POLA2Q14181 598 aa18.11■□□□□ 0.49
DDX11-219ENST00000542242 COL11A2P13942 1736 aaPredicted RBP18.1■□□□□ 0.49
DDX11-219ENST00000542242 APBB1O00213 710 aa18.1■□□□□ 0.49
DDX11-219ENST00000542242 TBC1D9BQ66K14 1250 aa18.1■□□□□ 0.49
DDX11-219ENST00000542242 CLEC4GQ6UXB4 293 aa18.1■□□□□ 0.49
DDX11-219ENST00000542242 SUCLG2Q96I99 432 aa18.1■□□□□ 0.49
DDX11-219ENST00000542242 EXOC6BQ9Y2D4 811 aa18.1■□□□□ 0.49
DDX11-219ENST00000542242 ZNF330Q9Y3S2 320 aaPredicted RBP18.1■□□□□ 0.49
DDX11-219ENST00000542242 ATP5J2-PTCD1G3V325 749 aa18.09■□□□□ 0.49
DDX11-219ENST00000542242 SRGAP3O43295 1099 aa18.09■□□□□ 0.49
DDX11-219ENST00000542242 MTX1Q13505 466 aa18.09■□□□□ 0.49
DDX11-219ENST00000542242 KIF6Q6ZMV9 814 aa18.09■□□□□ 0.49
DDX11-219ENST00000542242 ZBTB3Q9H5J0 574 aa18.09■□□□□ 0.49
DDX11-219ENST00000542242 MAP3K15Q6ZN16 1313 aa18.08■□□□□ 0.49
DDX11-219ENST00000542242 ARFGEF1Q9Y6D6 1849 aa18.08■□□□□ 0.48
DDX11-219ENST00000542242 ERVV-1B6SEH8 477 aa18.08■□□□□ 0.48
DDX11-219ENST00000542242 SMARCA5O60264 1052 aaPredicted RBP18.08■□□□□ 0.48
DDX11-219ENST00000542242 HLFQ16534 295 aa18.08■□□□□ 0.48
DDX11-219ENST00000542242 CARMIL3Q8ND23 1372 aa18.07■□□□□ 0.48
DDX11-219ENST00000542242 RAB11FIP3O75154 756 aa18.06■□□□□ 0.48
DDX11-219ENST00000542242 LRRCC1Q9C099 1032 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms