RNA–Protein interactions for RNA: ENST00000542113.1

NKRF-204, Transcript of NFKB repressing factor, humanhuman

TSL 3 BASIC

Gene NKRF, Length 3,351 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKRF-204ENST00000542113 CHMP4CQ96CF2 233 aa8.08□□□□□ -1.12
NKRF-204ENST00000542113 USP25Q9UHP3 1055 aa8.08□□□□□ -1.12
NKRF-204ENST00000542113 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.08□□□□□ -1.12
NKRF-204ENST00000542113 VPS37CA5D8V6 355 aaPredicted RBP8.08□□□□□ -1.12
NKRF-204ENST00000542113 DNTTIP2Q5QJE6 756 aaKnown RBP8.08□□□□□ -1.12
NKRF-204ENST00000542113 ARHGEF25Q86VW2 580 aa8.08□□□□□ -1.12
NKRF-204ENST00000542113 FSD1Q9BTV5 496 aa8.08□□□□□ -1.12
NKRF-204ENST00000542113 GOLGA6L4A6NEF3 574 aa8.07□□□□□ -1.12
NKRF-204ENST00000542113 KDM4AO75164 1064 aa8.07□□□□□ -1.12
NKRF-204ENST00000542113 ADCY5O95622 1261 aa8.07□□□□□ -1.12
NKRF-204ENST00000542113 ESCO1Q5FWF5 840 aa8.07□□□□□ -1.12
NKRF-204ENST00000542113 LARP1BQ659C4 914 aaKnown RBP8.07□□□□□ -1.12
NKRF-204ENST00000542113 CAMTA1Q9Y6Y1 1673 aa8.07□□□□□ -1.12
NKRF-204ENST00000542113 ZBTB7CA1YPR0 619 aa8.07□□□□□ -1.12
NKRF-204ENST00000542113 CAVIN2O95810 425 aa8.07□□□□□ -1.12
NKRF-204ENST00000542113 HCLS1P14317 486 aaPredicted RBP8.07□□□□□ -1.12
NKRF-204ENST00000542113 PTH1RQ03431 593 aa8.07□□□□□ -1.12
NKRF-204ENST00000542113 TSGA10IPQ3SY00 556 aa8.07□□□□□ -1.12
NKRF-204ENST00000542113 DDX19AQ9NUU7 478 aaKnown RBP8.07□□□□□ -1.12
NKRF-204ENST00000542113 KIF3AQ9Y496 699 aa8.07□□□□□ -1.12
NKRF-204ENST00000542113 MRC1P22897 1456 aa8.07□□□□□ -1.12
NKRF-204ENST00000542113 MAP3K11Q16584 847 aa8.07□□□□□ -1.12
NKRF-204ENST00000542113 RIC3Q7Z5B4 369 aa8.07□□□□□ -1.12
NKRF-204ENST00000542113 ANKRD24Q8TF21 1146 aa8.07□□□□□ -1.12
NKRF-204ENST00000542113 NPHP3Q7Z494 1330 aa8.06□□□□□ -1.12
NKRF-204ENST00000542113 SLC27A2O14975 620 aa8.06□□□□□ -1.12
NKRF-204ENST00000542113 KCNQ3O43525 872 aa8.06□□□□□ -1.12
NKRF-204ENST00000542113 GCP02774 474 aa8.06□□□□□ -1.12
NKRF-204ENST00000542113 CHAF1AQ13111 956 aaPredicted RBP8.06□□□□□ -1.12
NKRF-204ENST00000542113 NMIQ13287 307 aaPredicted RBP8.06□□□□□ -1.12
NKRF-204ENST00000542113 NUP62CLQ9H1M0 184 aa8.06□□□□□ -1.12
NKRF-204ENST00000542113 JCADQ9P266 1359 aa8.06□□□□□ -1.12
NKRF-204ENST00000542113 MED23Q9ULK4 1368 aa8.06□□□□□ -1.12
NKRF-204ENST00000542113 ANXA1P04083 346 aa8.06□□□□□ -1.12
NKRF-204ENST00000542113 RPS6KB1P23443 525 aa8.06□□□□□ -1.12
NKRF-204ENST00000542113 DNM1Q05193 864 aaKnown RBP8.06□□□□□ -1.12
NKRF-204ENST00000542113 ME3Q16798 604 aa8.06□□□□□ -1.12
NKRF-204ENST00000542113 FAM200AQ8TCP9 573 aa8.06□□□□□ -1.12
NKRF-204ENST00000542113 SUCLG2Q96I99 432 aa8.06□□□□□ -1.12
NKRF-204ENST00000542113 ABCC6O95255 1503 aa8.06□□□□□ -1.12
NKRF-204ENST00000542113 COL15A1P39059 1388 aa8.06□□□□□ -1.12
NKRF-204ENST00000542113 ADAMTS7Q9UKP4 1686 aa8.05□□□□□ -1.12
NKRF-204ENST00000542113 FUCA2Q9BTY2 467 aa8.05□□□□□ -1.12
NKRF-204ENST00000542113 BICC1Q9H694 974 aaKnown RBP8.05□□□□□ -1.12
NKRF-204ENST00000542113 PA2G4Q9UQ80 394 aaKnown RBP8.05□□□□□ -1.12
NKRF-204ENST00000542113 PXDNQ92626 1479 aa8.05□□□□□ -1.12
NKRF-204ENST00000542113 NOLC1Q14978 699 aaKnown RBP eCLIP8.05□□□□□ -1.12
NKRF-204ENST00000542113 CWF19L2Q2TBE0 894 aaKnown RBP8.05□□□□□ -1.12
NKRF-204ENST00000542113 ADCK5Q3MIX3 580 aa8.05□□□□□ -1.12
NKRF-204ENST00000542113 MYRIPQ8NFW9 859 aa8.05□□□□□ -1.12
NKRF-204ENST00000542113 LRRC59Q96AG4 307 aaKnown RBP8.05□□□□□ -1.12
NKRF-204ENST00000542113 U3KPZ7 1027 aaPredicted RBP8.05□□□□□ -1.12
NKRF-204ENST00000542113 SASH1O94885 1247 aa8.05□□□□□ -1.12
NKRF-204ENST00000542113 LARGE1O95461 756 aa8.05□□□□□ -1.12
NKRF-204ENST00000542113 HMGB1P09429 215 aaKnown RBP8.05□□□□□ -1.12
NKRF-204ENST00000542113 RAPGEF4Q8WZA2 1011 aa8.05□□□□□ -1.12
NKRF-204ENST00000542113 EAF2Q96CJ1 260 aaPredicted RBP8.05□□□□□ -1.12
NKRF-204ENST00000542113 COPRSQ9NQ92 184 aa8.05□□□□□ -1.12
NKRF-204ENST00000542113 SPTLC3Q9NUV7 552 aa8.05□□□□□ -1.12
NKRF-204ENST00000542113 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.05□□□□□ -1.12
NKRF-204ENST00000542113 ZNF142P52746 1687 aaPredicted RBP8.05□□□□□ -1.12
NKRF-204ENST00000542113 ATP5JP18859 108 aa8.04□□□□□ -1.12
NKRF-204ENST00000542113 ZSCAN16Q9H4T2 348 aaPredicted RBP8.04□□□□□ -1.12
NKRF-204ENST00000542113 FAM13BQ9NYF5 915 aa8.04□□□□□ -1.12
NKRF-204ENST00000542113 SIPA1L3O60292 1781 aaPredicted RBP8.04□□□□□ -1.12
NKRF-204ENST00000542113 KIF1AQ12756 1690 aa8.04□□□□□ -1.12
NKRF-204ENST00000542113 METTL22Q9BUU2 404 aaPredicted RBP8.04□□□□□ -1.12
NKRF-204ENST00000542113 TPCN1Q9ULQ1 816 aa8.04□□□□□ -1.12
NKRF-204ENST00000542113 MST1RQ04912 1400 aa8.04□□□□□ -1.12
NKRF-204ENST00000542113 NEURL1BA8MQ27 555 aa8.04□□□□□ -1.12
NKRF-204ENST00000542113 CPA1P15085 419 aa8.04□□□□□ -1.12
NKRF-204ENST00000542113 PROSER3Q2NL68 480 aa8.04□□□□□ -1.12
NKRF-204ENST00000542113 USPL1Q5W0Q7 1092 aa8.04□□□□□ -1.12
NKRF-204ENST00000542113 GIMAP6Q6P9H5 292 aa8.04□□□□□ -1.12
NKRF-204ENST00000542113 ZNF790Q6PG37 636 aa8.04□□□□□ -1.12
NKRF-204ENST00000542113 SPATA32Q96LK8 384 aa8.04□□□□□ -1.12
NKRF-204ENST00000542113 FAM227BQ96M60 508 aa8.04□□□□□ -1.12
NKRF-204ENST00000542113 CCDC8Q9H0W5 538 aaPredicted RBP8.04□□□□□ -1.12
NKRF-204ENST00000542113 TNMDQ9H2S6 317 aa8.04□□□□□ -1.12
NKRF-204ENST00000542113 CFAP45Q9UL16 551 aa8.04□□□□□ -1.12
NKRF-204ENST00000542113 TATP17735 454 aaPredicted RBP8.03□□□□□ -1.12
NKRF-204ENST00000542113 GCKRQ14397 625 aa8.03□□□□□ -1.12
NKRF-204ENST00000542113 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.03□□□□□ -1.12
NKRF-204ENST00000542113 LLPHQ9BRT6 129 aaKnown RBP8.03□□□□□ -1.12
NKRF-204ENST00000542113 BOLA2Q9H3K6 86 aa8.03□□□□□ -1.12
NKRF-204ENST00000542113 A0A0D9SFI3 127 aa8.03□□□□□ -1.12
NKRF-204ENST00000542113 NPHP4O75161 1426 aaPredicted RBP8.03□□□□□ -1.12
NKRF-204ENST00000542113 GTF2F1P35269 517 aaKnown RBP eCLIP8.03□□□□□ -1.122e-6■■■■□ 26
NKRF-204ENST00000542113 PLCB2Q00722 1185 aa8.03□□□□□ -1.12
NKRF-204ENST00000542113 ATL3Q6DD88 541 aa8.03□□□□□ -1.12
NKRF-204ENST00000542113 TTC5Q8N0Z6 440 aa8.03□□□□□ -1.12
NKRF-204ENST00000542113 SLC52A2Q9HAB3 445 aa8.03□□□□□ -1.12
NKRF-204ENST00000542113 TCHHQ07283 1943 aa8.02□□□□□ -1.12
NKRF-204ENST00000542113 AIMP1Q12904 312 aaKnown RBP8.02□□□□□ -1.12
NKRF-204ENST00000542113 TPRNQ4KMQ1 711 aa8.02□□□□□ -1.12
NKRF-204ENST00000542113 TTC6Q86TZ1 520 aa8.02□□□□□ -1.12
NKRF-204ENST00000542113 NECAB1Q8N987 351 aa8.02□□□□□ -1.12
NKRF-204ENST00000542113 NEK1Q96PY6 1258 aa8.02□□□□□ -1.12
NKRF-204ENST00000542113 LARP6Q9BRS8 491 aaKnown RBP8.02□□□□□ -1.12
NKRF-204ENST00000542113 H3BQV1 296 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms