RNA–Protein interactions for RNA: ENST00000542107.5

CX3CR1-206, Transcript of C-X3-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 4 BASIC

Gene CX3CR1, Length 3,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1-206ENST00000542107 ZNF830Q96NB3 372 aaPredicted RBP12.03□□□□□ -0.48
CX3CR1-206ENST00000542107 UBE3BQ7Z3V4 1068 aa12.03□□□□□ -0.48
CX3CR1-206ENST00000542107 USP25Q9UHP3 1055 aa12.03□□□□□ -0.48
CX3CR1-206ENST00000542107 FER1L4A9Z1Z3 1794 aa12.03□□□□□ -0.48
CX3CR1-206ENST00000542107 LARP1BQ659C4 914 aaKnown RBP12.03□□□□□ -0.48
CX3CR1-206ENST00000542107 PDLIM2Q96JY6 352 aa12.03□□□□□ -0.48
CX3CR1-206ENST00000542107 TPCN1Q9ULQ1 816 aa12.03□□□□□ -0.48
CX3CR1-206ENST00000542107 NEURL1BA8MQ27 555 aa12.02□□□□□ -0.48
CX3CR1-206ENST00000542107 NECTIN1Q15223 517 aa12.02□□□□□ -0.48
CX3CR1-206ENST00000542107 ANKRD13DQ6ZTN6 518 aa12.02□□□□□ -0.48
CX3CR1-206ENST00000542107 SLC27A2O14975 620 aa12.02□□□□□ -0.49
CX3CR1-206ENST00000542107 PHF14O94880 888 aa12.02□□□□□ -0.49
CX3CR1-206ENST00000542107 GCKRQ14397 625 aa12.02□□□□□ -0.49
CX3CR1-206ENST00000542107 VPS53Q5VIR6 699 aa12.02□□□□□ -0.49
CX3CR1-206ENST00000542107 ZNF589Q86UQ0 364 aaPredicted RBP12.02□□□□□ -0.49
CX3CR1-206ENST00000542107 SLC52A2Q9HAB3 445 aa12.02□□□□□ -0.49
CX3CR1-206ENST00000542107 ZSWIM6Q9HCJ5 1215 aa12.02□□□□□ -0.49
CX3CR1-206ENST00000542107 NOL7Q9UMY1 257 aaKnown RBP12.02□□□□□ -0.49
CX3CR1-206ENST00000542107 LTN1O94822 1766 aa12.02□□□□□ -0.49
CX3CR1-206ENST00000542107 EPB41L2O43491 1005 aaKnown RBP12.01□□□□□ -0.49
CX3CR1-206ENST00000542107 BLOC1S2Q6QNY1 142 aa12.01□□□□□ -0.49
CX3CR1-206ENST00000542107 CCDC129Q6ZRS4 1044 aa12.01□□□□□ -0.49
CX3CR1-206ENST00000542107 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.01□□□□□ -0.49
CX3CR1-206ENST00000542107 MTMR6Q9Y217 621 aa12.01□□□□□ -0.49
CX3CR1-206ENST00000542107 ERBB3P21860 1342 aa12.01□□□□□ -0.49
CX3CR1-206ENST00000542107 ADGRL3Q9HAR2 1447 aa12.01□□□□□ -0.49
CX3CR1-206ENST00000542107 NFAT5O94916 1531 aa12.01□□□□□ -0.49
CX3CR1-206ENST00000542107 TFCP2Q12800 502 aa12.01□□□□□ -0.49
CX3CR1-206ENST00000542107 SEC62Q99442 399 aaKnown RBP12.01□□□□□ -0.49
CX3CR1-206ENST00000542107 TFIP11Q9UBB9 837 aaKnown RBP12.01□□□□□ -0.49
CX3CR1-206ENST00000542107 USP42Q9H9J4 1324 aaKnown RBP12.01□□□□□ -0.49
CX3CR1-206ENST00000542107 RGPD2P0DJD1 1756 aa12.01□□□□□ -0.49
CX3CR1-206ENST00000542107 PPFIA3O75145 1194 aa12.01□□□□□ -0.49
CX3CR1-206ENST00000542107 FOSBP53539 338 aa12.01□□□□□ -0.49
CX3CR1-206ENST00000542107 HSP90AA2PQ14568 343 aaPredicted RBP12.01□□□□□ -0.49
CX3CR1-206ENST00000542107 CCDC183Q5T5S1 534 aa12.01□□□□□ -0.49
CX3CR1-206ENST00000542107 ATP6V1DQ9Y5K8 247 aa12.01□□□□□ -0.49
CX3CR1-206ENST00000542107 A0A087WZG4 1122 aa12□□□□□ -0.49
CX3CR1-206ENST00000542107 RBM10P98175 930 aaKnown RBP12□□□□□ -0.49
CX3CR1-206ENST00000542107 ST3GAL1Q11201 340 aa12□□□□□ -0.49
CX3CR1-206ENST00000542107 MAP4K1Q92918 833 aa12□□□□□ -0.49
CX3CR1-206ENST00000542107 NEUROD6Q96NK8 337 aa12□□□□□ -0.49
CX3CR1-206ENST00000542107 LRRC2Q9BYS8 371 aa12□□□□□ -0.49
CX3CR1-206ENST00000542107 CCDC39Q9UFE4 941 aa12□□□□□ -0.49
CX3CR1-206ENST00000542107 ZKSCAN5Q9Y2L8 839 aa12□□□□□ -0.49
CX3CR1-206ENST00000542107 ZNF330Q9Y3S2 320 aaPredicted RBP12□□□□□ -0.49
CX3CR1-206ENST00000542107 NPHP3Q7Z494 1330 aa12□□□□□ -0.49
CX3CR1-206ENST00000542107 MARF1Q9Y4F3 1742 aaKnown RBP12□□□□□ -0.49
CX3CR1-206ENST00000542107 PHKG2P15735 406 aa12□□□□□ -0.49
CX3CR1-206ENST00000542107 UBE2HP62256 183 aa12□□□□□ -0.49
CX3CR1-206ENST00000542107 CAMK4Q16566 473 aa12□□□□□ -0.49
CX3CR1-206ENST00000542107 SLFNL1Q499Z3 407 aa12□□□□□ -0.49
CX3CR1-206ENST00000542107 IL17RAQ96F46 866 aa12□□□□□ -0.49
CX3CR1-206ENST00000542107 ZSCAN31Q96LW9 406 aaPredicted RBP12□□□□□ -0.49
CX3CR1-206ENST00000542107 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.99□□□□□ -0.49
CX3CR1-206ENST00000542107 OFD1O75665 1012 aa11.99□□□□□ -0.49
CX3CR1-206ENST00000542107 DDX46Q7L014 1031 aaKnown RBP11.99□□□□□ -0.49
CX3CR1-206ENST00000542107 METTL22Q9BUU2 404 aaPredicted RBP11.99□□□□□ -0.49
CX3CR1-206ENST00000542107 FGD1P98174 961 aa11.99□□□□□ -0.49
CX3CR1-206ENST00000542107 DNTTIP2Q5QJE6 756 aaKnown RBP11.99□□□□□ -0.49
CX3CR1-206ENST00000542107 CDC37L1Q7L3B6 337 aa11.99□□□□□ -0.49
CX3CR1-206ENST00000542107 IFNL2Q8IZJ0 200 aa11.99□□□□□ -0.49
CX3CR1-206ENST00000542107 NAP1L2Q9ULW6 460 aaPredicted RBP11.99□□□□□ -0.49
CX3CR1-206ENST00000542107 HSP90B1P14625 803 aaKnown RBP11.99□□□□□ -0.49
CX3CR1-206ENST00000542107 ATF3P18847 181 aa11.99□□□□□ -0.49
CX3CR1-206ENST00000542107 PSMA5P28066 241 aa11.99□□□□□ -0.49
CX3CR1-206ENST00000542107 CABP4P57796 275 aa11.99□□□□□ -0.49
CX3CR1-206ENST00000542107 RNF20Q5VTR2 975 aa11.99□□□□□ -0.49
CX3CR1-206ENST00000542107 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.99□□□□□ -0.49
CX3CR1-206ENST00000542107 DBNDD2Q9BQY9 259 aa11.99□□□□□ -0.49
CX3CR1-206ENST00000542107 SH2B1Q9NRF2 756 aaPredicted RBP11.99□□□□□ -0.49
CX3CR1-206ENST00000542107 DBNLQ9UJU6 430 aaKnown RBP11.99□□□□□ -0.49
CX3CR1-206ENST00000542107 HIP1O00291 1037 aa11.98□□□□□ -0.49
CX3CR1-206ENST00000542107 DDX11Q96FC9 970 aa11.98□□□□□ -0.49
CX3CR1-206ENST00000542107 CACNA1FO60840 1977 aa11.98□□□□□ -0.49
CX3CR1-206ENST00000542107 SNRPA1P09661 255 aaKnown RBP11.98□□□□□ -0.49
CX3CR1-206ENST00000542107 ARID3AQ99856 593 aa11.98□□□□□ -0.49
CX3CR1-206ENST00000542107 CYP27B1O15528 508 aa11.98□□□□□ -0.49
CX3CR1-206ENST00000542107 ADCY5O95622 1261 aa11.98□□□□□ -0.49
CX3CR1-206ENST00000542107 PRKCSHP14314 528 aaPredicted RBP11.98□□□□□ -0.49
CX3CR1-206ENST00000542107 LMBR1LQ6UX01 489 aa11.98□□□□□ -0.49
CX3CR1-206ENST00000542107 TM6SF1Q9BZW5 370 aa11.98□□□□□ -0.49
CX3CR1-206ENST00000542107 TTC12Q9H892 705 aaPredicted RBP11.98□□□□□ -0.49
CX3CR1-206ENST00000542107 GOLGA6L4A6NEF3 574 aa11.97□□□□□ -0.49
CX3CR1-206ENST00000542107 HS1BP3Q53T59 392 aa11.97□□□□□ -0.49
CX3CR1-206ENST00000542107 TNNI3KQ59H18 835 aa11.97□□□□□ -0.49
CX3CR1-206ENST00000542107 C17orf53Q8N3J3 647 aaPredicted RBP11.97□□□□□ -0.49
CX3CR1-206ENST00000542107 C19orf44Q9H6X5 657 aa11.97□□□□□ -0.49
CX3CR1-206ENST00000542107 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.97□□□□□ -0.49
CX3CR1-206ENST00000542107 FPGT-TNNI3KV9GXZ4 949 aa11.97□□□□□ -0.49
CX3CR1-206ENST00000542107 TCHHQ07283 1943 aa11.97□□□□□ -0.49
CX3CR1-206ENST00000542107 HEG1Q9ULI3 1381 aa11.97□□□□□ -0.49
CX3CR1-206ENST00000542107 CEBPZQ03701 1054 aaKnown RBP11.97□□□□□ -0.49
CX3CR1-206ENST00000542107 PTPN12Q05209 780 aaKnown RBP11.97□□□□□ -0.49
CX3CR1-206ENST00000542107 JAK2O60674 1132 aa11.96□□□□□ -0.49
CX3CR1-206ENST00000542107 TIMM10P62072 90 aa11.96□□□□□ -0.49
CX3CR1-206ENST00000542107 CCDC85AQ96PX6 553 aaPredicted RBP11.96□□□□□ -0.49
CX3CR1-206ENST00000542107 FMNL2Q96PY5 1086 aa11.96□□□□□ -0.49
CX3CR1-206ENST00000542107 NPHP4O75161 1426 aaPredicted RBP11.96□□□□□ -0.49
CX3CR1-206ENST00000542107 RPS6KB1P23443 525 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms