RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 ZFAND3Q9H8U3 227 aa8.07□□□□□ -1.12
CPSF7-220ENST00000541963 SCHIP1Q9P0W5 487 aaPredicted RBP8.07□□□□□ -1.12
CPSF7-220ENST00000541963 BIN2Q9UBW5 565 aaPredicted RBP8.07□□□□□ -1.12
CPSF7-220ENST00000541963 SHANK2Q9UPX8 1470 aa8.06□□□□□ -1.12
CPSF7-220ENST00000541963 MROH2AA6NES4 1674 aa8.06□□□□□ -1.12
CPSF7-220ENST00000541963 IL2RAP01589 272 aa8.06□□□□□ -1.12
CPSF7-220ENST00000541963 TIMP2P16035 220 aa8.06□□□□□ -1.12
CPSF7-220ENST00000541963 HSPA2P54652 639 aa8.06□□□□□ -1.12
CPSF7-220ENST00000541963 PPARGC1BQ86YN6 1023 aaKnown RBP8.06□□□□□ -1.12
CPSF7-220ENST00000541963 SLC9A9Q8IVB4 645 aa8.06□□□□□ -1.12
CPSF7-220ENST00000541963 COL26A1Q96A83 441 aa8.06□□□□□ -1.12
CPSF7-220ENST00000541963 AGBL1Q96MI9 1066 aa8.06□□□□□ -1.12
CPSF7-220ENST00000541963 TSEN34Q9BSV6 310 aaKnown RBP8.06□□□□□ -1.12
CPSF7-220ENST00000541963 KLF16Q9BXK1 252 aaPredicted RBP8.06□□□□□ -1.12
CPSF7-220ENST00000541963 TSPAN10Q9H1Z9 355 aaPredicted RBP8.06□□□□□ -1.12
CPSF7-220ENST00000541963 DUOX2Q9NRD8 1548 aa8.06□□□□□ -1.12
CPSF7-220ENST00000541963 C3P01024 1663 aa8.05□□□□□ -1.12
CPSF7-220ENST00000541963 NPATQ14207 1427 aa8.05□□□□□ -1.12
CPSF7-220ENST00000541963 FAM135AQ9P2D6 1515 aa8.05□□□□□ -1.12
CPSF7-220ENST00000541963 SOWAHDA6NJG2 315 aa8.05□□□□□ -1.12
CPSF7-220ENST00000541963 SERPINB4P48594 390 aa8.05□□□□□ -1.12
CPSF7-220ENST00000541963 PSMA6P60900 246 aaKnown RBP8.05□□□□□ -1.12
CPSF7-220ENST00000541963 CENPCQ03188 943 aa8.05□□□□□ -1.12
CPSF7-220ENST00000541963 FKBP5Q13451 457 aaPredicted RBP8.05□□□□□ -1.12
CPSF7-220ENST00000541963 ZNF395Q9H8N7 513 aaPredicted RBP8.05□□□□□ -1.12
CPSF7-220ENST00000541963 EGFL7Q9UHF1 273 aa8.05□□□□□ -1.12
CPSF7-220ENST00000541963 KIF15Q9NS87 1388 aa8.05□□□□□ -1.12
CPSF7-220ENST00000541963 LMTK3Q96Q04 1460 aa8.05□□□□□ -1.12
CPSF7-220ENST00000541963 CLTCQ00610 1675 aaKnown RBP8.05□□□□□ -1.12
CPSF7-220ENST00000541963 PREX1Q8TCU6 1659 aa8.05□□□□□ -1.12
CPSF7-220ENST00000541963 DNMT1P26358 1616 aaKnown RBP8.04□□□□□ -1.12
CPSF7-220ENST00000541963 CAPN5O15484 640 aaPredicted RBP8.04□□□□□ -1.12
CPSF7-220ENST00000541963 MTFR1Q15390 333 aa8.04□□□□□ -1.12
CPSF7-220ENST00000541963 TMEM214Q6NUQ4 689 aaKnown RBP8.04□□□□□ -1.12
CPSF7-220ENST00000541963 GLYCTKQ8IVS8 523 aa8.04□□□□□ -1.12
CPSF7-220ENST00000541963 GTF3C2Q8WUA4 911 aaPredicted RBP8.04□□□□□ -1.12
CPSF7-220ENST00000541963 HPS1Q92902 700 aa8.04□□□□□ -1.12
CPSF7-220ENST00000541963 ZSCAN10Q96SZ4 725 aaPredicted RBP8.04□□□□□ -1.12
CPSF7-220ENST00000541963 ZNF232Q9UNY5 417 aa8.04□□□□□ -1.12
CPSF7-220ENST00000541963 PDZRN3Q9UPQ7 1066 aa8.04□□□□□ -1.12
CPSF7-220ENST00000541963 KANK1Q14678 1352 aa8.04□□□□□ -1.12
CPSF7-220ENST00000541963 ERBINQ96RT1 1412 aa8.03□□□□□ -1.12
CPSF7-220ENST00000541963 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.03□□□□□ -1.121e-11■■□□□ 12.1
CPSF7-220ENST00000541963 SCNN1AP37088 669 aa8.03□□□□□ -1.12
CPSF7-220ENST00000541963 EPHA4P54764 986 aa8.03□□□□□ -1.12
CPSF7-220ENST00000541963 FOXK2Q01167 660 aa8.03□□□□□ -1.12
CPSF7-220ENST00000541963 SF3B2Q13435 895 aaKnown RBP8.03□□□□□ -1.12
CPSF7-220ENST00000541963 GNASQ5JWF2 1037 aa8.03□□□□□ -1.12
CPSF7-220ENST00000541963 SLC27A3Q5K4L6 730 aa8.03□□□□□ -1.12
CPSF7-220ENST00000541963 TBCELQ5QJ74 424 aa8.03□□□□□ -1.12
CPSF7-220ENST00000541963 STAG2Q8N3U4 1231 aa8.03□□□□□ -1.12
CPSF7-220ENST00000541963 CABP1Q9NZU7 370 aa8.03□□□□□ -1.12
CPSF7-220ENST00000541963 EIF2AK4Q9P2K8 1649 aaKnown RBP8.03□□□□□ -1.12
CPSF7-220ENST00000541963 KDM5DQ9BY66 1539 aa8.03□□□□□ -1.12
CPSF7-220ENST00000541963 NCOA1Q15788 1441 aa8.03□□□□□ -1.12
CPSF7-220ENST00000541963 CROCC2H7BZ55 1655 aa8.02□□□□□ -1.13
CPSF7-220ENST00000541963 SERTM1A2A2V5 107 aa8.02□□□□□ -1.13
CPSF7-220ENST00000541963 ITGAEP38570 1179 aa8.02□□□□□ -1.13
CPSF7-220ENST00000541963 FKBP4Q02790 459 aaKnown RBP eCLIP8.02□□□□□ -1.13
CPSF7-220ENST00000541963 NAA30Q147X3 362 aaPredicted RBP8.02□□□□□ -1.13
CPSF7-220ENST00000541963 MEIOBQ8N635 442 aa8.02□□□□□ -1.13
CPSF7-220ENST00000541963 NIFKQ9BYG3 293 aaKnown RBP8.02□□□□□ -1.13
CPSF7-220ENST00000541963 SEPT3Q9UH03 358 aa8.02□□□□□ -1.13
CPSF7-220ENST00000541963 PTPRKQ15262 1439 aa8.02□□□□□ -1.13
CPSF7-220ENST00000541963 H3BRB1 525 aa8.01□□□□□ -1.13
CPSF7-220ENST00000541963 C21orf2O43822 256 aa8.01□□□□□ -1.13
CPSF7-220ENST00000541963 GPC1P35052 558 aa8.01□□□□□ -1.13
CPSF7-220ENST00000541963 TRIM67Q6ZTA4 783 aa8.01□□□□□ -1.13
CPSF7-220ENST00000541963 KDF1Q8NAX2 398 aaPredicted RBP8.01□□□□□ -1.13
CPSF7-220ENST00000541963 TUT1Q9H6E5 874 aaKnown RBP8.01□□□□□ -1.13
CPSF7-220ENST00000541963 POLMQ9NP87 494 aaPredicted RBP8.01□□□□□ -1.13
CPSF7-220ENST00000541963 TNRQ92752 1358 aa8□□□□□ -1.13
CPSF7-220ENST00000541963 FAM187AA6NFU0 413 aa8□□□□□ -1.13
CPSF7-220ENST00000541963 ICMTO60725 284 aa8□□□□□ -1.13
CPSF7-220ENST00000541963 BMP2P12643 396 aa8□□□□□ -1.13
CPSF7-220ENST00000541963 ZNF211Q13398 564 aaPredicted RBP8□□□□□ -1.13
CPSF7-220ENST00000541963 TEAD4Q15561 434 aa8□□□□□ -1.13
CPSF7-220ENST00000541963 C16orf46Q6P387 395 aa8□□□□□ -1.13
CPSF7-220ENST00000541963 THEMISQ8N1K5 641 aaPredicted RBP8□□□□□ -1.13
CPSF7-220ENST00000541963 PURBQ96QR8 312 aaKnown RBP8□□□□□ -1.13
CPSF7-220ENST00000541963 C2orf49Q9BVC5 232 aaPredicted RBP8□□□□□ -1.13
CPSF7-220ENST00000541963 ANO2Q9NQ90 1003 aa8□□□□□ -1.13
CPSF7-220ENST00000541963 HRH3Q9Y5N1 445 aa8□□□□□ -1.13
CPSF7-220ENST00000541963 ADGRL2O95490 1459 aa8□□□□□ -1.13
CPSF7-220ENST00000541963 PZPP20742 1482 aa8□□□□□ -1.13
CPSF7-220ENST00000541963 RNF17Q9BXT8 1623 aaKnown RBP8□□□□□ -1.13
CPSF7-220ENST00000541963 ROCK1Q13464 1354 aa7.99□□□□□ -1.13
CPSF7-220ENST00000541963 ZC3H13Q5T200 1668 aaKnown RBP7.99□□□□□ -1.13
CPSF7-220ENST00000541963 FAM13AO94988 1023 aa7.99□□□□□ -1.13
CPSF7-220ENST00000541963 NOS2P35228 1153 aa7.99□□□□□ -1.13
CPSF7-220ENST00000541963 MARSP56192 900 aaKnown RBP7.99□□□□□ -1.13
CPSF7-220ENST00000541963 SCARF1Q14162 830 aa7.99□□□□□ -1.13
CPSF7-220ENST00000541963 HELQQ8TDG4 1101 aa7.99□□□□□ -1.13
CPSF7-220ENST00000541963 RHBDD1Q8TEB9 315 aa7.99□□□□□ -1.13
CPSF7-220ENST00000541963 FHDC1Q9C0D6 1143 aaPredicted RBP7.99□□□□□ -1.13
CPSF7-220ENST00000541963 ANKRD50Q9ULJ7 1429 aa7.99□□□□□ -1.13
CPSF7-220ENST00000541963 ERCC3P19447 782 aa7.98□□□□□ -1.13
CPSF7-220ENST00000541963 RNF144AP50876 292 aaPredicted RBP7.98□□□□□ -1.13
CPSF7-220ENST00000541963 NPM2Q86SE8 214 aaKnown RBP7.98□□□□□ -1.13
CPSF7-220ENST00000541963 LINC00528Q8N1L1 170 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms