RNA–Protein interactions for RNA: ENST00000541589.5

LMO3-226, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 1,499 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-226ENST00000541589 NEUROD2Q15784 382 aa10.55□□□□□ -0.72
LMO3-226ENST00000541589 IFNL2Q8IZJ0 200 aa10.55□□□□□ -0.72
LMO3-226ENST00000541589 RSPH6AQ9H0K4 717 aa10.55□□□□□ -0.72
LMO3-226ENST00000541589 USP42Q9H9J4 1324 aaKnown RBP10.55□□□□□ -0.72
LMO3-226ENST00000541589 POLRMTO00411 1230 aaKnown RBP10.55□□□□□ -0.72
LMO3-226ENST00000541589 TM4SF1P30408 202 aa10.55□□□□□ -0.72
LMO3-226ENST00000541589 SRP68Q9UHB9 627 aaKnown RBP10.55□□□□□ -0.72
LMO3-226ENST00000541589 MKRN1Q9UHC7 482 aaKnown RBP10.55□□□□□ -0.72
LMO3-226ENST00000541589 MYH14Q7Z406 1995 aaKnown RBP10.54□□□□□ -0.72
LMO3-226ENST00000541589 CNTNAP1P78357 1384 aa10.54□□□□□ -0.72
LMO3-226ENST00000541589 PRKAR2BP31323 418 aa10.54□□□□□ -0.72
LMO3-226ENST00000541589 FAM161AQ3B820 660 aa10.54□□□□□ -0.72
LMO3-226ENST00000541589 IL16Q14005 1332 aa10.53□□□□□ -0.72
LMO3-226ENST00000541589 ERVV-2B6SEH9 535 aa10.53□□□□□ -0.72
LMO3-226ENST00000541589 CTCFP49711 727 aaPredicted RBP10.53□□□□□ -0.72
LMO3-226ENST00000541589 EYA1Q99502 592 aa10.53□□□□□ -0.72
LMO3-226ENST00000541589 MYH16Q9H6N6 1097 aa10.53□□□□□ -0.72
LMO3-226ENST00000541589 NFKBIEO00221 500 aa10.52□□□□□ -0.73
LMO3-226ENST00000541589 EIF4A2Q14240 407 aaKnown RBP10.52□□□□□ -0.73
LMO3-226ENST00000541589 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.52□□□□□ -0.73
LMO3-226ENST00000541589 RTN4Q9NQC3 1192 aaKnown RBP10.52□□□□□ -0.73
LMO3-226ENST00000541589 HMOX1P09601 288 aa10.51□□□□□ -0.73
LMO3-226ENST00000541589 CRKLP46109 303 aaKnown RBP10.51□□□□□ -0.73
LMO3-226ENST00000541589 RIPK4P57078 832 aa10.51□□□□□ -0.73
LMO3-226ENST00000541589 NFE2L2Q16236 605 aa10.51□□□□□ -0.73
LMO3-226ENST00000541589 ABHD8Q96I13 439 aa10.51□□□□□ -0.73
LMO3-226ENST00000541589 WBP1LQ9NX94 342 aa10.51□□□□□ -0.73
LMO3-226ENST00000541589 ADAMTS7Q9UKP4 1686 aa10.51□□□□□ -0.73
LMO3-226ENST00000541589 PASKQ96RG2 1323 aa10.51□□□□□ -0.73
LMO3-226ENST00000541589 TIAM2Q8IVF5 1701 aa10.5□□□□□ -0.73
LMO3-226ENST00000541589 RGS19P49795 217 aa10.5□□□□□ -0.73
LMO3-226ENST00000541589 MARVELD3Q96A59 401 aa10.5□□□□□ -0.73
LMO3-226ENST00000541589 VEGFBP49765 207 aa10.49□□□□□ -0.73
LMO3-226ENST00000541589 LBX1P52954 281 aa10.49□□□□□ -0.73
LMO3-226ENST00000541589 TTLL6Q8N841 843 aa10.49□□□□□ -0.73
LMO3-226ENST00000541589 CT47B1P0C2W7 299 aaPredicted RBP10.49□□□□□ -0.73
LMO3-226ENST00000541589 CALD1Q05682 793 aaKnown RBP10.49□□□□□ -0.73
LMO3-226ENST00000541589 LMOD3Q0VAK6 560 aa10.49□□□□□ -0.73
LMO3-226ENST00000541589 INTS5Q6P9B9 1019 aaKnown RBP10.49□□□□□ -0.73
LMO3-226ENST00000541589 AIDAQ96BJ3 306 aa10.49□□□□□ -0.73
LMO3-226ENST00000541589 PHACTR3Q96KR7 559 aa10.49□□□□□ -0.73
LMO3-226ENST00000541589 NRXN2Q9P2S2 1712 aa10.48□□□□□ -0.73
LMO3-226ENST00000541589 DLEC1Q9Y238 1755 aa10.48□□□□□ -0.73
LMO3-226ENST00000541589 PLIN1O60240 522 aa10.48□□□□□ -0.73
LMO3-226ENST00000541589 HSPA8P11142 646 aaKnown RBP10.48□□□□□ -0.73
LMO3-226ENST00000541589 SULT6B1Q6IMI4 303 aa10.48□□□□□ -0.73
LMO3-226ENST00000541589 B4GALNT3Q6L9W6 998 aa10.48□□□□□ -0.73
LMO3-226ENST00000541589 EXOC6Q8TAG9 804 aa10.48□□□□□ -0.73
LMO3-226ENST00000541589 FANCIQ9NVI1 1328 aa10.47□□□□□ -0.73
LMO3-226ENST00000541589 PTCD1O75127 700 aaKnown RBP10.47□□□□□ -0.73
LMO3-226ENST00000541589 HSP90AB1P08238 724 aaKnown RBP10.47□□□□□ -0.73
LMO3-226ENST00000541589 MLLT1Q03111 559 aaPredicted RBP10.47□□□□□ -0.73
LMO3-226ENST00000541589 NFIXQ14938 502 aa10.47□□□□□ -0.73
LMO3-226ENST00000541589 USPL1Q5W0Q7 1092 aa10.47□□□□□ -0.73
LMO3-226ENST00000541589 CCDC136Q96JN2 1154 aa10.47□□□□□ -0.73
LMO3-226ENST00000541589 VIRMAQ69YN4 1812 aaKnown RBP10.47□□□□□ -0.73
LMO3-226ENST00000541589 C2orf72A6NCS6 295 aa10.46□□□□□ -0.74
LMO3-226ENST00000541589 ITGBL1O95965 494 aaPredicted RBP10.46□□□□□ -0.74
LMO3-226ENST00000541589 DOK7Q18PE1 504 aa10.46□□□□□ -0.74
LMO3-226ENST00000541589 ERFEQ4G0M1 354 aa10.46□□□□□ -0.74
LMO3-226ENST00000541589 KRTAP3-3Q9BYR6 98 aa10.46□□□□□ -0.74
LMO3-226ENST00000541589 KRTAP3-2Q9BYR7 98 aa10.46□□□□□ -0.74
LMO3-226ENST00000541589 TJP1Q07157 1748 aa10.46□□□□□ -0.74
LMO3-226ENST00000541589 CCDC88AQ3V6T2 1871 aa10.46□□□□□ -0.74
LMO3-226ENST00000541589 SOS1Q07889 1333 aaPredicted RBP10.46□□□□□ -0.74
LMO3-226ENST00000541589 AFDNP55196 1824 aaKnown RBP10.45□□□□□ -0.74
LMO3-226ENST00000541589 TMEM88BA6NKF7 163 aa10.45□□□□□ -0.74
LMO3-226ENST00000541589 GTPBP6O43824 516 aaPredicted RBP10.45□□□□□ -0.74
LMO3-226ENST00000541589 ZPR1O75312 459 aa10.45□□□□□ -0.74
LMO3-226ENST00000541589 BCAR3O75815 825 aa10.45□□□□□ -0.74
LMO3-226ENST00000541589 DDNO94850 711 aaPredicted RBP10.45□□□□□ -0.74
LMO3-226ENST00000541589 SERPINB2P05120 415 aa10.45□□□□□ -0.74
LMO3-226ENST00000541589 RARSP54136 660 aaKnown RBP10.45□□□□□ -0.74
LMO3-226ENST00000541589 CABP4P57796 275 aa10.45□□□□□ -0.74
LMO3-226ENST00000541589 LDHDQ86WU2 507 aa10.45□□□□□ -0.74
LMO3-226ENST00000541589 C2CD5Q86YS7 1000 aa10.45□□□□□ -0.74
LMO3-226ENST00000541589 AEBP1Q8IUX7 1158 aa10.45□□□□□ -0.74
LMO3-226ENST00000541589 CRBNQ96SW2 442 aa10.45□□□□□ -0.74
LMO3-226ENST00000541589 BCL2L12Q9HB09 334 aa10.45□□□□□ -0.74
LMO3-226ENST00000541589 RYDENQ9NUL5 291 aaKnown RBP10.45□□□□□ -0.74
LMO3-226ENST00000541589 LTBP3Q9NS15 1303 aa10.45□□□□□ -0.74
LMO3-226ENST00000541589 CARMIL3Q8ND23 1372 aa10.44□□□□□ -0.74
LMO3-226ENST00000541589 H0YIN7 160 aa10.44□□□□□ -0.74
LMO3-226ENST00000541589 NARFQ9UHQ1 456 aa10.44□□□□□ -0.74
LMO3-226ENST00000541589 DICER1Q9UPY3 1922 aaKnown RBP10.44□□□□□ -0.74
LMO3-226ENST00000541589 RASSF10A6NK89 507 aa10.43□□□□□ -0.74
LMO3-226ENST00000541589 GNAI1P63096 354 aa10.43□□□□□ -0.74
LMO3-226ENST00000541589 EXOSC9Q06265 439 aaKnown RBP10.43□□□□□ -0.74
LMO3-226ENST00000541589 PDE3AQ14432 1141 aa10.43□□□□□ -0.74
LMO3-226ENST00000541589 C20orf194Q5TEA3 1177 aa10.43□□□□□ -0.74
LMO3-226ENST00000541589 NFATC2IPQ8NCF5 419 aa10.43□□□□□ -0.74
LMO3-226ENST00000541589 TSR2Q969E8 191 aaKnown RBP10.43□□□□□ -0.74
LMO3-226ENST00000541589 IFT57Q9NWB7 429 aa10.43□□□□□ -0.74
LMO3-226ENST00000541589 C21orf2O43822 256 aa10.42□□□□□ -0.74
LMO3-226ENST00000541589 ZNF853P0CG23 659 aa10.42□□□□□ -0.74
LMO3-226ENST00000541589 PLEKHO1Q53GL0 409 aaPredicted RBP10.42□□□□□ -0.74
LMO3-226ENST00000541589 TAF1DQ9H5J8 278 aaPredicted RBP10.42□□□□□ -0.74
LMO3-226ENST00000541589 FER1L6Q2WGJ9 1857 aa10.42□□□□□ -0.74
LMO3-226ENST00000541589 DLG5Q8TDM6 1919 aa10.42□□□□□ -0.74
LMO3-226ENST00000541589 IQCA1LA6NCM1 817 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms