RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 SKAP1Q86WV1 359 aa17.77■□□□□ 0.44
CYB561A3-216ENST00000540755 LINC00116Q8NCU8 138 aa17.77■□□□□ 0.44
CYB561A3-216ENST00000540755 NUP98P52948 1817 aa17.77■□□□□ 0.43
CYB561A3-216ENST00000540755 GCKRQ14397 625 aa17.76■□□□□ 0.43
CYB561A3-216ENST00000540755 CCDC87Q9NVE4 849 aa17.76■□□□□ 0.43
CYB561A3-216ENST00000540755 CRKLP46109 303 aaKnown RBP17.75■□□□□ 0.43
CYB561A3-216ENST00000540755 NUCB1Q02818 461 aa17.75■□□□□ 0.43
CYB561A3-216ENST00000540755 INTS5Q6P9B9 1019 aaKnown RBP17.75■□□□□ 0.43
CYB561A3-216ENST00000540755 FLAD1Q8NFF5 587 aa17.75■□□□□ 0.43
CYB561A3-216ENST00000540755 AK7Q96M32 723 aa17.75■□□□□ 0.43
CYB561A3-216ENST00000540755 MAP3K15Q6ZN16 1313 aa17.75■□□□□ 0.43
CYB561A3-216ENST00000540755 GPR162Q16538 588 aa17.75■□□□□ 0.43
CYB561A3-216ENST00000540755 ZBTB3Q9H5J0 574 aa17.75■□□□□ 0.43
CYB561A3-216ENST00000540755 COL15A1P39059 1388 aa17.75■□□□□ 0.43
CYB561A3-216ENST00000540755 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.74■□□□□ 0.43
CYB561A3-216ENST00000540755 YBX3P16989 372 aaKnown RBP eCLIP17.74■□□□□ 0.43
CYB561A3-216ENST00000540755 RGS3P49796 1198 aa17.74■□□□□ 0.43
CYB561A3-216ENST00000540755 EIF5P55010 431 aaKnown RBP17.74■□□□□ 0.43
CYB561A3-216ENST00000540755 MTX1Q13505 466 aa17.74■□□□□ 0.43
CYB561A3-216ENST00000540755 ZNF330Q9Y3S2 320 aaPredicted RBP17.74■□□□□ 0.43
CYB561A3-216ENST00000540755 PNMA6EA0A0J9YXQ4 647 aa17.73■□□□□ 0.43
CYB561A3-216ENST00000540755 PHF14O94880 888 aa17.73■□□□□ 0.43
CYB561A3-216ENST00000540755 HMGB2P26583 209 aaKnown RBP17.73■□□□□ 0.43
CYB561A3-216ENST00000540755 NPM2Q86SE8 214 aaKnown RBP17.73■□□□□ 0.43
CYB561A3-216ENST00000540755 CHD1LQ86WJ1 897 aa17.73■□□□□ 0.43
CYB561A3-216ENST00000540755 SSH3Q8TE77 659 aa17.73■□□□□ 0.43
CYB561A3-216ENST00000540755 ISCA1Q9BUE6 129 aa17.73■□□□□ 0.43
CYB561A3-216ENST00000540755 BCORQ6W2J9 1755 aa17.73■□□□□ 0.43
CYB561A3-216ENST00000540755 CNTNAP4Q9C0A0 1308 aa17.73■□□□□ 0.43
CYB561A3-216ENST00000540755 ERVV-1B6SEH8 477 aa17.72■□□□□ 0.43
CYB561A3-216ENST00000540755 ATP5J2-PTCD1G3V325 749 aa17.72■□□□□ 0.43
CYB561A3-216ENST00000540755 TRIM28Q13263 835 aaKnown RBP17.72■□□□□ 0.43
CYB561A3-216ENST00000540755 TCIRG1Q13488 830 aa17.72■□□□□ 0.43
CYB561A3-216ENST00000540755 POLA2Q14181 598 aa17.72■□□□□ 0.43
CYB561A3-216ENST00000540755 HSP90AB3PQ58FF7 597 aa17.72■□□□□ 0.43
CYB561A3-216ENST00000540755 GIGYF2Q6Y7W6 1299 aaKnown RBP17.72■□□□□ 0.43
CYB561A3-216ENST00000540755 CCDC191Q8NCU4 936 aa17.72■□□□□ 0.43
CYB561A3-216ENST00000540755 CWC25Q9NXE8 425 aaPredicted RBP17.72■□□□□ 0.43
CYB561A3-216ENST00000540755 SSFA2P28290 1259 aa17.71■□□□□ 0.43
CYB561A3-216ENST00000540755 ANKRD45Q5TZF3 282 aa17.71■□□□□ 0.43
CYB561A3-216ENST00000540755 PPP1R42Q7Z4L9 355 aa17.71■□□□□ 0.43
CYB561A3-216ENST00000540755 DZIP3Q86Y13 1208 aaKnown RBP17.71■□□□□ 0.43
CYB561A3-216ENST00000540755 SUCLG2Q96I99 432 aa17.71■□□□□ 0.43
CYB561A3-216ENST00000540755 TSHZ2Q9NRE2 1034 aa17.71■□□□□ 0.43
CYB561A3-216ENST00000540755 A0A087WZG4 1122 aa17.69■□□□□ 0.42
CYB561A3-216ENST00000540755 H7C1W4 665 aa17.69■□□□□ 0.42
CYB561A3-216ENST00000540755 GNPATO15228 680 aa17.69■□□□□ 0.42
CYB561A3-216ENST00000540755 SRGAP3O43295 1099 aa17.69■□□□□ 0.42
CYB561A3-216ENST00000540755 CASP7P55210 303 aa17.69■□□□□ 0.42
CYB561A3-216ENST00000540755 RC3H1Q5TC82 1133 aaKnown RBP17.69■□□□□ 0.42
CYB561A3-216ENST00000540755 KAZALD1Q96I82 304 aa17.69■□□□□ 0.42
CYB561A3-216ENST00000540755 CD2APQ9Y5K6 639 aa17.69■□□□□ 0.42
CYB561A3-216ENST00000540755 PDE4AP27815 886 aa17.69■□□□□ 0.42
CYB561A3-216ENST00000540755 LNPKQ9C0E8 428 aa17.69■□□□□ 0.42
CYB561A3-216ENST00000540755 HLFQ16534 295 aa17.68■□□□□ 0.42
CYB561A3-216ENST00000540755 UBE3BQ7Z3V4 1068 aa17.68■□□□□ 0.42
CYB561A3-216ENST00000540755 SCN7AQ01118 1682 aa17.67■□□□□ 0.42
CYB561A3-216ENST00000540755 BICC1Q9H694 974 aaKnown RBP17.67■□□□□ 0.42
CYB561A3-216ENST00000540755 ZBTB47Q9UFB7 747 aaPredicted RBP17.67■□□□□ 0.42
CYB561A3-216ENST00000540755 RABL6Q3YEC7 729 aaPredicted RBP17.66■□□□□ 0.42
CYB561A3-216ENST00000540755 TBC1D2BQ9UPU7 963 aa17.66■□□□□ 0.42
CYB561A3-216ENST00000540755 C4AP0C0L4 1744 aa17.66■□□□□ 0.42
CYB561A3-216ENST00000540755 KIAA1551Q9HCM1 1747 aa17.66■□□□□ 0.42
CYB561A3-216ENST00000540755 RGL2O15211 777 aa17.65■□□□□ 0.42
CYB561A3-216ENST00000540755 RAB11FIP3O75154 756 aa17.65■□□□□ 0.42
CYB561A3-216ENST00000540755 CAMTA2O94983 1202 aa17.65■□□□□ 0.42
CYB561A3-216ENST00000540755 EXOC6BQ9Y2D4 811 aa17.65■□□□□ 0.42
CYB561A3-216ENST00000540755 NOP58Q9Y2X3 529 aaKnown RBP17.65■□□□□ 0.42
CYB561A3-216ENST00000540755 KIF13BQ9NQT8 1826 aa17.65■□□□□ 0.42
CYB561A3-216ENST00000540755 RPS6KA4O75676 772 aa17.64■□□□□ 0.41
CYB561A3-216ENST00000540755 PCCAP05165 728 aaPredicted RBP17.64■□□□□ 0.41
CYB561A3-216ENST00000540755 HSP90AB4PQ58FF6 505 aa17.64■□□□□ 0.41
CYB561A3-216ENST00000540755 ZNF34Q8IZ26 560 aa17.64■□□□□ 0.41
CYB561A3-216ENST00000540755 MYH3P11055 1940 aa17.64■□□□□ 0.41
CYB561A3-216ENST00000540755 GRIN3BO60391 1043 aa17.63■□□□□ 0.41
CYB561A3-216ENST00000540755 EPHA10Q5JZY3 1008 aa17.63■□□□□ 0.41
CYB561A3-216ENST00000540755 NLRP10Q86W26 655 aa17.63■□□□□ 0.41
CYB561A3-216ENST00000540755 CDHR2Q9BYE9 1310 aa17.63■□□□□ 0.41
CYB561A3-216ENST00000540755 SURF6O75683 361 aaKnown RBP17.63■□□□□ 0.41
CYB561A3-216ENST00000540755 FAM161AQ3B820 660 aa17.63■□□□□ 0.41
CYB561A3-216ENST00000540755 ZBTB38Q8NAP3 1195 aaPredicted RBP17.63■□□□□ 0.41
CYB561A3-216ENST00000540755 JARID2Q92833 1246 aaPredicted RBP17.63■□□□□ 0.41
CYB561A3-216ENST00000540755 LRRCC1Q9C099 1032 aa17.63■□□□□ 0.41
CYB561A3-216ENST00000540755 CLEC4GQ6UXB4 293 aa17.62■□□□□ 0.41
CYB561A3-216ENST00000540755 PLA2G12BQ9BX93 195 aa17.62■□□□□ 0.41
CYB561A3-216ENST00000540755 ZNF652Q9Y2D9 606 aa17.62■□□□□ 0.41
CYB561A3-216ENST00000540755 MMP10P09238 476 aa17.61■□□□□ 0.41
CYB561A3-216ENST00000540755 FOXO4P98177 505 aa17.61■□□□□ 0.41
CYB561A3-216ENST00000540755 BACH2Q9BYV9 841 aa17.61■□□□□ 0.41
CYB561A3-216ENST00000540755 C10orf71Q711Q0 1435 aa17.6■□□□□ 0.41
CYB561A3-216ENST00000540755 LAMB2P55268 1798 aa17.6■□□□□ 0.41
CYB561A3-216ENST00000540755 UBN2Q6ZU65 1347 aa17.6■□□□□ 0.41
CYB561A3-216ENST00000540755 APBB1O00213 710 aa17.6■□□□□ 0.41
CYB561A3-216ENST00000540755 SMARCA5O60264 1052 aaPredicted RBP17.6■□□□□ 0.41
CYB561A3-216ENST00000540755 GPTP24298 496 aa17.6■□□□□ 0.41
CYB561A3-216ENST00000540755 PARP10Q53GL7 1025 aa17.6■□□□□ 0.41
CYB561A3-216ENST00000540755 KIF1BPQ96EK5 621 aa17.6■□□□□ 0.41
CYB561A3-216ENST00000540755 RTCBQ9Y3I0 505 aaKnown RBP17.6■□□□□ 0.41
CYB561A3-216ENST00000540755 ADRA2BP18089 450 aa17.59■□□□□ 0.41
CYB561A3-216ENST00000540755 RFX5P48382 616 aaPredicted RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms