RNA–Protein interactions for RNA: ENST00000540728.6

CACNA2D4-211, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 2

Gene CACNA2D4, Length 596 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-211ENST00000540728 ALDH1B1P30837 517 aa22.21■■□□□ 1.15
CACNA2D4-211ENST00000540728 UTP14AQ9BVJ6 771 aaKnown RBP22.2■■□□□ 1.14
CACNA2D4-211ENST00000540728 RRAGCQ9HB90 399 aa22.2■■□□□ 1.14
CACNA2D4-211ENST00000540728 ELL2O00472 640 aaPredicted RBP22.19■■□□□ 1.14
CACNA2D4-211ENST00000540728 NCBP3Q53F19 620 aaKnown RBP22.19■■□□□ 1.14
CACNA2D4-211ENST00000540728 DICER1Q9UPY3 1922 aaKnown RBP22.18■■□□□ 1.14
CACNA2D4-211ENST00000540728 ANKRD36CQ5JPF3 1778 aa22.18■■□□□ 1.14
CACNA2D4-211ENST00000540728 LTBP3Q9NS15 1303 aa22.18■■□□□ 1.14
CACNA2D4-211ENST00000540728 NTSR2O95665 410 aa22.18■■□□□ 1.14
CACNA2D4-211ENST00000540728 TCIRG1Q13488 830 aa22.18■■□□□ 1.14
CACNA2D4-211ENST00000540728 CCDC93Q567U6 631 aa22.18■■□□□ 1.14
CACNA2D4-211ENST00000540728 ANKRD13DQ6ZTN6 518 aa22.18■■□□□ 1.14
CACNA2D4-211ENST00000540728 WWC1Q8IX03 1113 aa22.18■■□□□ 1.14
CACNA2D4-211ENST00000540728 RPGRQ92834 1020 aaKnown RBP22.18■■□□□ 1.14
CACNA2D4-211ENST00000540728 RIC1Q4ADV7 1423 aa22.17■■□□□ 1.14
CACNA2D4-211ENST00000540728 RNF123Q5XPI4 1314 aa22.17■■□□□ 1.14
CACNA2D4-211ENST00000540728 CRY2Q49AN0 593 aa22.17■■□□□ 1.14
CACNA2D4-211ENST00000540728 PLBD2Q8NHP8 589 aa22.17■■□□□ 1.14
CACNA2D4-211ENST00000540728 RBM46Q8TBY0 533 aaKnown RBP22.17■■□□□ 1.14
CACNA2D4-211ENST00000540728 GLTPD2A6NH11 291 aa22.16■■□□□ 1.14
CACNA2D4-211ENST00000540728 NLRP3Q96P20 1036 aa22.16■■□□□ 1.14
CACNA2D4-211ENST00000540728 NLRP10Q86W26 655 aa22.15■■□□□ 1.14
CACNA2D4-211ENST00000540728 C8orf58Q8NAV2 365 aa22.15■■□□□ 1.14
CACNA2D4-211ENST00000540728 IL16Q14005 1332 aa22.14■■□□□ 1.14
CACNA2D4-211ENST00000540728 SLC10A5Q5PT55 438 aa22.14■■□□□ 1.13
CACNA2D4-211ENST00000540728 CCDC30Q5VVM6 783 aa22.14■■□□□ 1.13
CACNA2D4-211ENST00000540728 FAM9BQ8IZU0 186 aa22.14■■□□□ 1.13
CACNA2D4-211ENST00000540728 C7orf43Q8WVR3 580 aa22.14■■□□□ 1.13
CACNA2D4-211ENST00000540728 RBM17Q96I25 401 aaKnown RBP22.14■■□□□ 1.13
CACNA2D4-211ENST00000540728 TRMT112Q9UI30 125 aaKnown RBP22.14■■□□□ 1.13
CACNA2D4-211ENST00000540728 HOXA10P31260 410 aaPredicted RBP22.13■■□□□ 1.13
CACNA2D4-211ENST00000540728 GOLGA2Q08379 1002 aa22.13■■□□□ 1.13
CACNA2D4-211ENST00000540728 DPY19L2Q6NUT2 758 aa22.13■■□□□ 1.13
CACNA2D4-211ENST00000540728 OLFM4Q6UX06 510 aa22.13■■□□□ 1.13
CACNA2D4-211ENST00000540728 RTKN2Q8IZC4 609 aa22.13■■□□□ 1.13
CACNA2D4-211ENST00000540728 TSR2Q969E8 191 aaKnown RBP22.13■■□□□ 1.13
CACNA2D4-211ENST00000540728 APLP1P51693 650 aa22.12■■□□□ 1.13
CACNA2D4-211ENST00000540728 RIC3Q7Z5B4 369 aa22.12■■□□□ 1.13
CACNA2D4-211ENST00000540728 SALL2Q9Y467 1007 aaPredicted RBP22.12■■□□□ 1.13
CACNA2D4-211ENST00000540728 WDR90Q96KV7 1748 aa22.11■■□□□ 1.13
CACNA2D4-211ENST00000540728 SH3TC1Q8TE82 1336 aa22.11■■□□□ 1.13
CACNA2D4-211ENST00000540728 FKBP4Q02790 459 aaKnown RBP eCLIP22.11■■□□□ 1.13
CACNA2D4-211ENST00000540728 CC2D2BQ6DHV5 1058 aa22.11■■□□□ 1.13
CACNA2D4-211ENST00000540728 CRAMP1Q96RY5 1269 aa22.11■■□□□ 1.13
CACNA2D4-211ENST00000540728 VEGFAP15692 232 aaPredicted RBP22.1■■□□□ 1.13
CACNA2D4-211ENST00000540728 WDR63Q8IWG1 891 aa22.1■■□□□ 1.13
CACNA2D4-211ENST00000540728 TMX4Q9H1E5 349 aaPredicted RBP22.1■■□□□ 1.13
CACNA2D4-211ENST00000540728 ZNF277Q9NRM2 450 aaPredicted RBP22.1■■□□□ 1.13
CACNA2D4-211ENST00000540728 DDX58O95786 925 aaKnown RBP22.09■■□□□ 1.13
CACNA2D4-211ENST00000540728 FSTL1Q12841 308 aa22.09■■□□□ 1.13
CACNA2D4-211ENST00000540728 TSPYL6Q8N831 410 aa22.09■■□□□ 1.13
CACNA2D4-211ENST00000540728 SMC1BQ8NDV3 1235 aa22.09■■□□□ 1.13
CACNA2D4-211ENST00000540728 ISCA1Q9BUE6 129 aa22.09■■□□□ 1.13
CACNA2D4-211ENST00000540728 STK31Q9BXU1 1019 aa22.09■■□□□ 1.13
CACNA2D4-211ENST00000540728 PHAXQ9H814 394 aaKnown RBP22.09■■□□□ 1.13
CACNA2D4-211ENST00000540728 ATP5J2-PTCD1G3V325 749 aa22.08■■□□□ 1.13
CACNA2D4-211ENST00000540728 HCLS1P14317 486 aaPredicted RBP22.08■■□□□ 1.13
CACNA2D4-211ENST00000540728 TWISTNBQ3B726 338 aaPredicted RBP22.08■■□□□ 1.13
CACNA2D4-211ENST00000540728 GRIPAP1Q4V328 841 aa22.08■■□□□ 1.13
CACNA2D4-211ENST00000540728 C3orf67Q6ZVT6 689 aa22.07■■□□□ 1.12
CACNA2D4-211ENST00000540728 PPEF1O14829 653 aaPredicted RBP22.06■■□□□ 1.12
CACNA2D4-211ENST00000540728 TRIM28Q13263 835 aaKnown RBP22.06■■□□□ 1.12
CACNA2D4-211ENST00000540728 ZNF428Q96B54 188 aa22.06■■□□□ 1.12
CACNA2D4-211ENST00000540728 LAMB2P55268 1798 aa22.06■■□□□ 1.12
CACNA2D4-211ENST00000540728 TCERG1O14776 1098 aaKnown RBP22.05■■□□□ 1.12
CACNA2D4-211ENST00000540728 DDNO94850 711 aaPredicted RBP22.05■■□□□ 1.12
CACNA2D4-211ENST00000540728 DDX46Q7L014 1031 aaKnown RBP22.05■■□□□ 1.12
CACNA2D4-211ENST00000540728 SYNE4Q8N205 404 aa22.05■■□□□ 1.12
CACNA2D4-211ENST00000540728 IARSP41252 1262 aaKnown RBP22.04■■□□□ 1.12
CACNA2D4-211ENST00000540728 FAM89AQ96GI7 184 aa22.04■■□□□ 1.12
CACNA2D4-211ENST00000540728 PSMD1Q99460 953 aa22.04■■□□□ 1.12
CACNA2D4-211ENST00000540728 ZNF541Q9H0D2 1346 aa22.04■■□□□ 1.12
CACNA2D4-211ENST00000540728 FANCIQ9NVI1 1328 aa22.04■■□□□ 1.12
CACNA2D4-211ENST00000540728 HSP90B1P14625 803 aaKnown RBP22.03■■□□□ 1.12
CACNA2D4-211ENST00000540728 MYD88Q99836 296 aa22.03■■□□□ 1.12
CACNA2D4-211ENST00000540728 SNED1Q8TER0 1413 aa22.03■■□□□ 1.12
CACNA2D4-211ENST00000540728 BBOX1O75936 387 aa22.02■■□□□ 1.12
CACNA2D4-211ENST00000540728 SLC51AQ86UW1 340 aa22.02■■□□□ 1.12
CACNA2D4-211ENST00000540728 MYH16Q9H6N6 1097 aa22.02■■□□□ 1.12
CACNA2D4-211ENST00000540728 ABCC4O15439 1325 aa22.02■■□□□ 1.12
CACNA2D4-211ENST00000540728 SLC4A2P04920 1241 aa22.01■■□□□ 1.11
CACNA2D4-211ENST00000540728 HTRA3P83110 453 aa22.01■■□□□ 1.11
CACNA2D4-211ENST00000540728 CCDC191Q8NCU4 936 aa22.01■■□□□ 1.11
CACNA2D4-211ENST00000540728 METTL22Q9BUU2 404 aaPredicted RBP22.01■■□□□ 1.11
CACNA2D4-211ENST00000540728 ATP6V0A2Q9Y487 856 aa22.01■■□□□ 1.11
CACNA2D4-211ENST00000540728 IQCA1LA6NCM1 817 aa22■■□□□ 1.11
CACNA2D4-211ENST00000540728 POTECB2RU33 542 aa22■■□□□ 1.11
CACNA2D4-211ENST00000540728 RTL5Q5HYW3 569 aaPredicted RBP22■■□□□ 1.11
CACNA2D4-211ENST00000540728 KSR2Q6VAB6 950 aa22■■□□□ 1.11
CACNA2D4-211ENST00000540728 JDP2Q8WYK2 163 aa22■■□□□ 1.11
CACNA2D4-211ENST00000540728 MAP3K2Q9Y2U5 619 aa22■■□□□ 1.11
CACNA2D4-211ENST00000540728 DDX60Q8IY21 1712 aaKnown RBP22■■□□□ 1.11
CACNA2D4-211ENST00000540728 IRS4O14654 1257 aaPredicted RBP21.99■■□□□ 1.11
CACNA2D4-211ENST00000540728 NEXNQ0ZGT2 675 aa21.99■■□□□ 1.11
CACNA2D4-211ENST00000540728 GRAPQ13588 217 aa21.99■■□□□ 1.11
CACNA2D4-211ENST00000540728 ZBTB38Q8NAP3 1195 aaPredicted RBP21.99■■□□□ 1.11
CACNA2D4-211ENST00000540728 GRAPLQ8TC17 118 aaPredicted RBP21.99■■□□□ 1.11
CACNA2D4-211ENST00000540728 CWC25Q9NXE8 425 aaPredicted RBP21.99■■□□□ 1.11
CACNA2D4-211ENST00000540728 PI4KAP2A4QPH2 592 aa21.98■■□□□ 1.11
CACNA2D4-211ENST00000540728 EXOSC9Q06265 439 aaKnown RBP21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 332.9 ms