RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 CCDC148Q8NFR7 591 aa12.76□□□□□ -0.37
PBX1-212ENST00000540236 ZNF396Q96N95 335 aaPredicted RBP12.76□□□□□ -0.37
PBX1-212ENST00000540236 VEZTQ9HBM0 779 aa12.76□□□□□ -0.37
PBX1-212ENST00000540236 RBM28Q9NW13 759 aaKnown RBP12.76□□□□□ -0.37
PBX1-212ENST00000540236 NUTM2FA1L443 756 aa12.76□□□□□ -0.37
PBX1-212ENST00000540236 GOLGA6L10A6NI86 522 aa12.76□□□□□ -0.37
PBX1-212ENST00000540236 SRGAP3O43295 1099 aa12.76□□□□□ -0.37
PBX1-212ENST00000540236 CCDC113Q9H0I3 377 aa12.76□□□□□ -0.37
PBX1-212ENST00000540236 YY1AP1Q9H869 796 aa12.76□□□□□ -0.37
PBX1-212ENST00000540236 KDM6BO15054 1643 aa12.76□□□□□ -0.37
PBX1-212ENST00000540236 GNGT1P63211 74 aa12.76□□□□□ -0.37
PBX1-212ENST00000540236 CCDC121Q6ZUS5 278 aa12.76□□□□□ -0.37
PBX1-212ENST00000540236 MICALCLQ6ZW33 695 aa12.76□□□□□ -0.37
PBX1-212ENST00000540236 HPDP32754 393 aaPredicted RBP12.76□□□□□ -0.37
PBX1-212ENST00000540236 ODF2LQ9ULJ1 636 aa12.76□□□□□ -0.37
PBX1-212ENST00000540236 TPX2Q9ULW0 747 aaKnown RBP12.76□□□□□ -0.37
PBX1-212ENST00000540236 MYO6Q9UM54 1294 aa12.76□□□□□ -0.37
PBX1-212ENST00000540236 DAPK1P53355 1430 aa12.76□□□□□ -0.37
PBX1-212ENST00000540236 CTAGE15A4D2H0 777 aa12.76□□□□□ -0.37
PBX1-212ENST00000540236 CTAGE8P0CG41 777 aa12.76□□□□□ -0.37
PBX1-212ENST00000540236 PLA2G4AP47712 749 aa12.76□□□□□ -0.37
PBX1-212ENST00000540236 CTAGE6Q86UF2 777 aa12.76□□□□□ -0.37
PBX1-212ENST00000540236 CTAGE4Q8IX94 777 aa12.76□□□□□ -0.37
PBX1-212ENST00000540236 PAX7P23759 505 aa12.75□□□□□ -0.37
PBX1-212ENST00000540236 TSPYL6Q8N831 410 aa12.75□□□□□ -0.37
PBX1-212ENST00000540236 MICAL1Q8TDZ2 1067 aa12.75□□□□□ -0.37
PBX1-212ENST00000540236 GBP3Q9H0R5 595 aa12.75□□□□□ -0.37
PBX1-212ENST00000540236 CPLX1O14810 134 aa12.75□□□□□ -0.37
PBX1-212ENST00000540236 SATB1Q01826 763 aa12.75□□□□□ -0.37
PBX1-212ENST00000540236 KIAA1328Q86T90 577 aa12.75□□□□□ -0.37
PBX1-212ENST00000540236 NDUFAB1O14561 156 aa12.75□□□□□ -0.37
PBX1-212ENST00000540236 PPP1R12BO60237 982 aaPredicted RBP12.75□□□□□ -0.37
PBX1-212ENST00000540236 RIPOR2Q9Y4F9 1068 aa12.75□□□□□ -0.37
PBX1-212ENST00000540236 ENO4A6NNW6 628 aa12.75□□□□□ -0.37
PBX1-212ENST00000540236 RANBP1P43487 201 aa12.75□□□□□ -0.37
PBX1-212ENST00000540236 PPP6R1Q9UPN7 881 aa12.75□□□□□ -0.37
PBX1-212ENST00000540236 FAM83GA6ND36 823 aa12.75□□□□□ -0.37
PBX1-212ENST00000540236 PSMA5P28066 241 aa12.75□□□□□ -0.37
PBX1-212ENST00000540236 LONRF2Q1L5Z9 754 aa12.75□□□□□ -0.37
PBX1-212ENST00000540236 A0A1B0GUA9 196 aa12.74□□□□□ -0.37
PBX1-212ENST00000540236 MYBL1P10243 752 aa12.74□□□□□ -0.37
PBX1-212ENST00000540236 HSPA4P34932 840 aa12.74□□□□□ -0.37
PBX1-212ENST00000540236 ADKP55263 362 aaKnown RBP12.74□□□□□ -0.37
PBX1-212ENST00000540236 EFCAB13Q8IY85 973 aa12.74□□□□□ -0.37
PBX1-212ENST00000540236 ROCK1Q13464 1354 aa12.74□□□□□ -0.37
PBX1-212ENST00000540236 NSD3Q9BZ95 1437 aa12.74□□□□□ -0.37
PBX1-212ENST00000540236 GOLGA6CA6NDK9 693 aa12.74□□□□□ -0.37
PBX1-212ENST00000540236 GOLGA6DP0CG33 693 aa12.74□□□□□ -0.37
PBX1-212ENST00000540236 NOP2P46087 812 aaKnown RBP12.74□□□□□ -0.37
PBX1-212ENST00000540236 GNAI1P63096 354 aa12.74□□□□□ -0.37
PBX1-212ENST00000540236 SUPT6HQ7KZ85 1726 aaKnown RBP12.74□□□□□ -0.37
PBX1-212ENST00000540236 CEP112Q8N8E3 955 aa12.74□□□□□ -0.37
PBX1-212ENST00000540236 XPO4Q9C0E2 1151 aaKnown RBP12.74□□□□□ -0.37
PBX1-212ENST00000540236 GOLGA6AQ9NYA3 693 aa12.74□□□□□ -0.37
PBX1-212ENST00000540236 TDRD9Q8NDG6 1382 aaKnown RBP12.74□□□□□ -0.37
PBX1-212ENST00000540236 EVC2Q86UK5 1308 aa12.74□□□□□ -0.37
PBX1-212ENST00000540236 IPO7O95373 1038 aaKnown RBP12.74□□□□□ -0.37
PBX1-212ENST00000540236 LARP1Q6PKG0 1096 aaKnown RBP12.74□□□□□ -0.37
PBX1-212ENST00000540236 SCAND2PQ9GZW5 306 aaPredicted RBP12.74□□□□□ -0.37
PBX1-212ENST00000540236 MINK1Q8N4C8 1332 aaPredicted RBP12.74□□□□□ -0.37
PBX1-212ENST00000540236 RAB11FIP3O75154 756 aa12.74□□□□□ -0.37
PBX1-212ENST00000540236 PDCP20941 246 aa12.74□□□□□ -0.37
PBX1-212ENST00000540236 HDGFL2Q7Z4V5 671 aaPredicted RBP12.74□□□□□ -0.37
PBX1-212ENST00000540236 TADA2BQ86TJ2 420 aa12.74□□□□□ -0.37
PBX1-212ENST00000540236 FMNL3Q8IVF7 1028 aa12.74□□□□□ -0.37
PBX1-212ENST00000540236 A0A1B0GVL5 298 aa12.74□□□□□ -0.37
PBX1-212ENST00000540236 SYCP1Q15431 976 aa12.74□□□□□ -0.37
PBX1-212ENST00000540236 ARMC3Q5W041 872 aa12.74□□□□□ -0.37
PBX1-212ENST00000540236 TERF2IPQ9NYB0 399 aa12.74□□□□□ -0.37
PBX1-212ENST00000540236 NLRP1Q9C000 1473 aa12.73□□□□□ -0.37
PBX1-212ENST00000540236 RBM6P78332 1123 aaKnown RBP12.73□□□□□ -0.37
PBX1-212ENST00000540236 ZNF513Q8N8E2 541 aaPredicted RBP12.73□□□□□ -0.37
PBX1-212ENST00000540236 BAIAP2L1Q9UHR4 511 aa12.73□□□□□ -0.37
PBX1-212ENST00000540236 CCDC196A0A1B0GTZ2 297 aa12.73□□□□□ -0.37
PBX1-212ENST00000540236 GNAI2P04899 355 aa12.73□□□□□ -0.37
PBX1-212ENST00000540236 POLD4Q9HCU8 107 aa12.73□□□□□ -0.37
PBX1-212ENST00000540236 JADE2Q9NQC1 790 aa12.73□□□□□ -0.37
PBX1-212ENST00000540236 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.73□□□□□ -0.37
PBX1-212ENST00000540236 THOC2Q8NI27 1593 aaKnown RBP12.73□□□□□ -0.37
PBX1-212ENST00000540236 MRPS25P82663 173 aaKnown RBP12.73□□□□□ -0.37
PBX1-212ENST00000540236 BLOC1S2Q6QNY1 142 aa12.73□□□□□ -0.37
PBX1-212ENST00000540236 YIPF3Q9GZM5 350 aa12.73□□□□□ -0.37
PBX1-212ENST00000540236 FHOD1Q9Y613 1164 aa12.73□□□□□ -0.37
PBX1-212ENST00000540236 PRDM2Q13029 1718 aa12.73□□□□□ -0.37
PBX1-212ENST00000540236 ANKRD50Q9ULJ7 1429 aa12.72□□□□□ -0.37
PBX1-212ENST00000540236 EIF5P55010 431 aaKnown RBP12.72□□□□□ -0.37
PBX1-212ENST00000540236 GSPT2Q8IYD1 628 aaKnown RBP12.72□□□□□ -0.37
PBX1-212ENST00000540236 BCAS4Q8TDM0 211 aa12.72□□□□□ -0.37
PBX1-212ENST00000540236 NUP88Q99567 741 aaPredicted RBP12.72□□□□□ -0.37
PBX1-212ENST00000540236 MKRN1Q9UHC7 482 aaKnown RBP12.72□□□□□ -0.37
PBX1-212ENST00000540236 GOLGA6L10A0A0M3HER8 536 aa12.72□□□□□ -0.37
PBX1-212ENST00000540236 RNF40O75150 1001 aa12.72□□□□□ -0.37
PBX1-212ENST00000540236 DDIT3P35638 169 aa12.72□□□□□ -0.37
PBX1-212ENST00000540236 RNF217Q8TC41 542 aa12.72□□□□□ -0.37
PBX1-212ENST00000540236 MEIS3Q99687 375 aa12.72□□□□□ -0.37
PBX1-212ENST00000540236 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.72□□□□□ -0.37
PBX1-212ENST00000540236 HSF2BPO75031 334 aa12.72□□□□□ -0.37
PBX1-212ENST00000540236 LRRFIP1Q32MZ4 808 aaKnown RBP12.72□□□□□ -0.37
PBX1-212ENST00000540236 CCDC158Q5M9N0 1113 aa12.72□□□□□ -0.37
PBX1-212ENST00000540236 PAIP2Q9BPZ3 127 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms