RNA–Protein interactions for RNA: ENST00000539921.5

SNHG1-211, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 1,071 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-211ENST00000539921 C17orf53Q8N3J3 647 aaPredicted RBP7.16□□□□□ -1.26
SNHG1-211ENST00000539921 ZNF513Q8N8E2 541 aaPredicted RBP7.16□□□□□ -1.26
SNHG1-211ENST00000539921 PRPF38AQ8NAV1 312 aaKnown RBP7.16□□□□□ -1.26
SNHG1-211ENST00000539921 TDRD7Q8NHU6 1098 aaKnown RBP7.16□□□□□ -1.26
SNHG1-211ENST00000539921 GTF3C6Q969F1 213 aa7.16□□□□□ -1.26
SNHG1-211ENST00000539921 CABS1Q96KC9 395 aa7.16□□□□□ -1.26
SNHG1-211ENST00000539921 ACBD3Q9H3P7 528 aa7.16□□□□□ -1.26
SNHG1-211ENST00000539921 CPSF2Q9P2I0 782 aaKnown RBP7.16□□□□□ -1.26
SNHG1-211ENST00000539921 DNAI1Q9UI46 699 aa7.16□□□□□ -1.26
SNHG1-211ENST00000539921 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.16□□□□□ -1.26
SNHG1-211ENST00000539921 SOS1Q07889 1333 aaPredicted RBP7.16□□□□□ -1.26
SNHG1-211ENST00000539921 RPAP1Q9BWH6 1393 aaPredicted RBP7.16□□□□□ -1.26
SNHG1-211ENST00000539921 CADPSQ9ULU8 1353 aa7.16□□□□□ -1.26
SNHG1-211ENST00000539921 CFTRP13569 1480 aa7.16□□□□□ -1.26
SNHG1-211ENST00000539921 KIAA0586Q9BVV6 1533 aa7.16□□□□□ -1.26
SNHG1-211ENST00000539921 SRGAP3O43295 1099 aa7.15□□□□□ -1.26
SNHG1-211ENST00000539921 SNUPNO95149 360 aaKnown RBP7.15□□□□□ -1.26
SNHG1-211ENST00000539921 CASTP20810 708 aaKnown RBP7.15□□□□□ -1.26
SNHG1-211ENST00000539921 PAX7P23759 505 aa7.15□□□□□ -1.26
SNHG1-211ENST00000539921 PPP2R1AP30153 589 aa7.15□□□□□ -1.26
SNHG1-211ENST00000539921 NF2P35240 595 aa7.15□□□□□ -1.26
SNHG1-211ENST00000539921 RPS6KA3P51812 740 aa7.15□□□□□ -1.26
SNHG1-211ENST00000539921 PDAP1Q13442 181 aaKnown RBP7.15□□□□□ -1.26
SNHG1-211ENST00000539921 ZRSR2Q15696 482 aaKnown RBP7.15□□□□□ -1.26
SNHG1-211ENST00000539921 E2F4Q16254 413 aa7.15□□□□□ -1.26
SNHG1-211ENST00000539921 C1QTNF12Q5T7M4 302 aa7.15□□□□□ -1.26
SNHG1-211ENST00000539921 ZKSCAN2Q63HK3 967 aa7.15□□□□□ -1.26
SNHG1-211ENST00000539921 ISM2Q6H9L7 571 aa7.15□□□□□ -1.26
SNHG1-211ENST00000539921 CHRDL2Q6WN34 429 aa7.15□□□□□ -1.26
SNHG1-211ENST00000539921 RINLQ6ZS11 566 aa7.15□□□□□ -1.26
SNHG1-211ENST00000539921 PIP4P2Q8N4L2 257 aa7.15□□□□□ -1.26
SNHG1-211ENST00000539921 MAB21L3Q8N8X9 362 aa7.15□□□□□ -1.26
SNHG1-211ENST00000539921 PANK1Q8TE04 598 aa7.15□□□□□ -1.26
SNHG1-211ENST00000539921 ZNF483Q8TF39 744 aaPredicted RBP7.15□□□□□ -1.26
SNHG1-211ENST00000539921 SNRNP27Q8WVK2 155 aaKnown RBP7.15□□□□□ -1.26
SNHG1-211ENST00000539921 UBXN4Q92575 508 aa7.15□□□□□ -1.26
SNHG1-211ENST00000539921 ARFGAP3Q9NP61 516 aa7.15□□□□□ -1.26
SNHG1-211ENST00000539921 ST7Q9NRC1 585 aa7.15□□□□□ -1.26
SNHG1-211ENST00000539921 CHCHD3Q9NX63 227 aaKnown RBP7.15□□□□□ -1.26
SNHG1-211ENST00000539921 SMC3Q9UQE7 1217 aa7.15□□□□□ -1.26
SNHG1-211ENST00000539921 ABCC11Q96J66 1382 aa7.15□□□□□ -1.26
SNHG1-211ENST00000539921 C9orf84Q5VXU9 1444 aa7.15□□□□□ -1.27
SNHG1-211ENST00000539921 SSH2Q76I76 1423 aa7.15□□□□□ -1.27
SNHG1-211ENST00000539921 PRAG1Q86YV5 1406 aa7.15□□□□□ -1.27
SNHG1-211ENST00000539921 ST20-MTHFSA0A0A6YYL1 179 aa7.14□□□□□ -1.27
SNHG1-211ENST00000539921 PDLIM1O00151 329 aa7.14□□□□□ -1.27
SNHG1-211ENST00000539921 WDR62O43379 1518 aa7.14□□□□□ -1.27
SNHG1-211ENST00000539921 TADA3O75528 432 aa7.14□□□□□ -1.27
SNHG1-211ENST00000539921 NBPF7P0C2Y1 421 aaPredicted RBP7.14□□□□□ -1.27
SNHG1-211ENST00000539921 MYBL2P10244 700 aa7.14□□□□□ -1.27
SNHG1-211ENST00000539921 HCLS1P14317 486 aaPredicted RBP7.14□□□□□ -1.27
SNHG1-211ENST00000539921 PTGS1P23219 599 aa7.14□□□□□ -1.27
SNHG1-211ENST00000539921 HNRNPH1P31943 449 aaKnown RBP7.14□□□□□ -1.27
SNHG1-211ENST00000539921 LMAN1P49257 510 aa7.14□□□□□ -1.27
SNHG1-211ENST00000539921 ZNF75DP51815 510 aa7.14□□□□□ -1.27
SNHG1-211ENST00000539921 ST5P78524 1137 aa7.14□□□□□ -1.27
SNHG1-211ENST00000539921 TUBB2AQ13885 445 aa7.14□□□□□ -1.27
SNHG1-211ENST00000539921 LRRFIP1Q32MZ4 808 aaKnown RBP7.14□□□□□ -1.27
SNHG1-211ENST00000539921 AMOTQ4VCS5 1084 aa7.14□□□□□ -1.27
SNHG1-211ENST00000539921 EFCAB6Q5THR3 1501 aa7.14□□□□□ -1.27
SNHG1-211ENST00000539921 CC2D1AQ6P1N0 951 aaPredicted RBP7.14□□□□□ -1.27
SNHG1-211ENST00000539921 RBM43Q6ZSC3 357 aaKnown RBP7.14□□□□□ -1.27
SNHG1-211ENST00000539921 TBC1D9Q6ZT07 1266 aa7.14□□□□□ -1.27
SNHG1-211ENST00000539921 PBRM1Q86U86 1689 aa7.14□□□□□ -1.27
SNHG1-211ENST00000539921 TAX1BP1Q86VP1 789 aa7.14□□□□□ -1.27
SNHG1-211ENST00000539921 CHD1LQ86WJ1 897 aa7.14□□□□□ -1.27
SNHG1-211ENST00000539921 FCHSD1Q86WN1 690 aa7.14□□□□□ -1.27
SNHG1-211ENST00000539921 CEP112Q8N8E3 955 aa7.14□□□□□ -1.27
SNHG1-211ENST00000539921 FAM71BQ8TC56 605 aa7.14□□□□□ -1.27
SNHG1-211ENST00000539921 RTF1Q92541 710 aaKnown RBP7.14□□□□□ -1.27
SNHG1-211ENST00000539921 ERBINQ96RT1 1412 aa7.14□□□□□ -1.27
SNHG1-211ENST00000539921 BAG1Q99933 345 aaPredicted RBP7.14□□□□□ -1.27
SNHG1-211ENST00000539921 TUBB2BQ9BVA1 445 aa7.14□□□□□ -1.27
SNHG1-211ENST00000539921 USP26Q9BXU7 913 aa7.14□□□□□ -1.27
SNHG1-211ENST00000539921 IMPACTQ9P2X3 320 aa7.14□□□□□ -1.27
SNHG1-211ENST00000539921 WDR7Q9Y4E6 1490 aa7.14□□□□□ -1.27
SNHG1-211ENST00000539921 DNMBPQ6XZF7 1577 aa7.13□□□□□ -1.27
SNHG1-211ENST00000539921 FANCAO15360 1455 aa7.13□□□□□ -1.27
SNHG1-211ENST00000539921 LIN7AO14910 233 aaPredicted RBP7.13□□□□□ -1.27
SNHG1-211ENST00000539921 FSBPO95073 299 aa7.13□□□□□ -1.27
SNHG1-211ENST00000539921 RLBP1P12271 317 aa7.13□□□□□ -1.27
SNHG1-211ENST00000539921 PECAM1P16284 738 aaPredicted RBP7.13□□□□□ -1.27
SNHG1-211ENST00000539921 USP5P45974 858 aa7.13□□□□□ -1.27
SNHG1-211ENST00000539921 TBC1D8BQ0IIM8 1120 aa7.13□□□□□ -1.27
SNHG1-211ENST00000539921 DRP2Q13474 957 aa7.13□□□□□ -1.27
SNHG1-211ENST00000539921 ARHGAP29Q52LW3 1261 aa7.13□□□□□ -1.27
SNHG1-211ENST00000539921 ANKRD45Q5TZF3 282 aa7.13□□□□□ -1.27
SNHG1-211ENST00000539921 INTS3Q68E01 1043 aaKnown RBP7.13□□□□□ -1.27
SNHG1-211ENST00000539921 YTHDF3Q7Z739 585 aaKnown RBP7.13□□□□□ -1.27
SNHG1-211ENST00000539921 MORC1Q86VD1 984 aa7.13□□□□□ -1.27
SNHG1-211ENST00000539921 DZIP1LQ8IYY4 767 aaKnown RBP7.13□□□□□ -1.27
SNHG1-211ENST00000539921 CCAR2Q8N163 923 aaKnown RBP7.13□□□□□ -1.27
SNHG1-211ENST00000539921 RABGGTAQ92696 567 aa7.13□□□□□ -1.27
SNHG1-211ENST00000539921 TMX3Q96JJ7 454 aa7.13□□□□□ -1.27
SNHG1-211ENST00000539921 PAGR1Q9BTK6 254 aa7.13□□□□□ -1.27
SNHG1-211ENST00000539921 GBP3Q9H0R5 595 aa7.13□□□□□ -1.27
SNHG1-211ENST00000539921 GGA2Q9UJY4 613 aa7.13□□□□□ -1.27
SNHG1-211ENST00000539921 MYO6Q9UM54 1294 aa7.13□□□□□ -1.27
SNHG1-211ENST00000539921 CDC42BPAQ5VT25 1732 aa7.13□□□□□ -1.27
SNHG1-211ENST00000539921 IQGAP2Q13576 1575 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 245.6 ms