RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 FAM182BQ5T319 152 aa14.58□□□□□ -0.08
VTN-202ENST00000539746 UBE3BQ7Z3V4 1068 aa14.58□□□□□ -0.08
VTN-202ENST00000539746 ZNF34Q8IZ26 560 aa14.58□□□□□ -0.08
VTN-202ENST00000539746 KIF1BPQ96EK5 621 aa14.58□□□□□ -0.08
VTN-202ENST00000539746 STK32BQ9NY57 414 aa14.58□□□□□ -0.08
VTN-202ENST00000539746 TFCP2L1Q9NZI6 479 aa14.58□□□□□ -0.08
VTN-202ENST00000539746 C4BP0C0L5 1744 aa14.58□□□□□ -0.08
VTN-202ENST00000539746 CCDC57Q2TAC2 916 aa14.57□□□□□ -0.08
VTN-202ENST00000539746 NLRP10Q86W26 655 aa14.57□□□□□ -0.08
VTN-202ENST00000539746 NLGN1Q8N2Q7 840 aa14.57□□□□□ -0.08
VTN-202ENST00000539746 LRRCC1Q9C099 1032 aa14.57□□□□□ -0.08
VTN-202ENST00000539746 TBC1D2BQ9UPU7 963 aa14.57□□□□□ -0.08
VTN-202ENST00000539746 NIP7Q9Y221 180 aaKnown RBP eCLIP14.57□□□□□ -0.083e-7■■■■□ 21.9
VTN-202ENST00000539746 CARMIL3Q8ND23 1372 aa14.57□□□□□ -0.08
VTN-202ENST00000539746 NUP188Q5SRE5 1749 aa14.56□□□□□ -0.08
VTN-202ENST00000539746 ATP5J2-PTCD1G3V325 749 aa14.56□□□□□ -0.08
VTN-202ENST00000539746 PDE8AO60658 829 aa14.56□□□□□ -0.08
VTN-202ENST00000539746 NBPF7P0C2Y1 421 aaPredicted RBP14.56□□□□□ -0.08
VTN-202ENST00000539746 PIP4K2AP48426 406 aaPredicted RBP14.56□□□□□ -0.08
VTN-202ENST00000539746 NUCB1Q02818 461 aa14.56□□□□□ -0.08
VTN-202ENST00000539746 RABL6Q3YEC7 729 aaPredicted RBP14.56□□□□□ -0.08
VTN-202ENST00000539746 TAF7LQ5H9L4 462 aa14.56□□□□□ -0.08
VTN-202ENST00000539746 USP42Q9H9J4 1324 aaKnown RBP14.56□□□□□ -0.08
VTN-202ENST00000539746 IFIT5Q13325 482 aaKnown RBP14.55□□□□□ -0.08
VTN-202ENST00000539746 POLA2Q14181 598 aa14.55□□□□□ -0.08
VTN-202ENST00000539746 CCDC152Q4G0S7 254 aa14.55□□□□□ -0.08
VTN-202ENST00000539746 CHD1LQ86WJ1 897 aa14.55□□□□□ -0.08
VTN-202ENST00000539746 CLASRPQ8N2M8 674 aaKnown RBP14.55□□□□□ -0.08
VTN-202ENST00000539746 PDZRN3Q9UPQ7 1066 aa14.55□□□□□ -0.08
VTN-202ENST00000539746 NOP58Q9Y2X3 529 aaKnown RBP14.55□□□□□ -0.08
VTN-202ENST00000539746 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.54□□□□□ -0.08
VTN-202ENST00000539746 SURF6O75683 361 aaKnown RBP14.54□□□□□ -0.08
VTN-202ENST00000539746 ST5P78524 1137 aa14.54□□□□□ -0.08
VTN-202ENST00000539746 ANKRD45Q5TZF3 282 aa14.54□□□□□ -0.08
VTN-202ENST00000539746 NBPF5PQ86XG9 351 aaPredicted RBP14.54□□□□□ -0.08
VTN-202ENST00000539746 C1orf115Q9H7X2 142 aa14.54□□□□□ -0.08
VTN-202ENST00000539746 IRS4O14654 1257 aaPredicted RBP14.53□□□□□ -0.08
VTN-202ENST00000539746 CIAO1O76071 339 aa14.53□□□□□ -0.08
VTN-202ENST00000539746 CASC1Q6TDU7 716 aa14.53□□□□□ -0.08
VTN-202ENST00000539746 ARHGEF1Q92888 912 aaKnown RBP14.53□□□□□ -0.08
VTN-202ENST00000539746 CDC5LQ99459 802 aaKnown RBP14.53□□□□□ -0.08
VTN-202ENST00000539746 BICC1Q9H694 974 aaKnown RBP14.53□□□□□ -0.08
VTN-202ENST00000539746 COPRSQ9NQ92 184 aa14.53□□□□□ -0.08
VTN-202ENST00000539746 SCN7AQ01118 1682 aa14.52□□□□□ -0.08
VTN-202ENST00000539746 RTL9Q8NET4 1388 aa14.52□□□□□ -0.08
VTN-202ENST00000539746 AOX1Q06278 1338 aa14.52□□□□□ -0.08
VTN-202ENST00000539746 ANKRD18BA2A2Z9 1011 aa14.52□□□□□ -0.09
VTN-202ENST00000539746 ERC2O15083 957 aa14.52□□□□□ -0.09
VTN-202ENST00000539746 IGHDP01880 384 aa14.52□□□□□ -0.09
VTN-202ENST00000539746 IL15P40933 162 aaPredicted RBP14.52□□□□□ -0.09
VTN-202ENST00000539746 SUCLG2Q96I99 432 aa14.52□□□□□ -0.09
VTN-202ENST00000539746 AKAP2Q9Y2D5 859 aa14.52□□□□□ -0.09
VTN-202ENST00000539746 CHMP3Q9Y3E7 222 aa14.52□□□□□ -0.09
VTN-202ENST00000539746 AFDNP55196 1824 aaKnown RBP14.52□□□□□ -0.09
VTN-202ENST00000539746 ANKRD36CQ5JPF3 1778 aa14.52□□□□□ -0.09
VTN-202ENST00000539746 RIC1Q4ADV7 1423 aa14.51□□□□□ -0.09
VTN-202ENST00000539746 GPTP24298 496 aa14.51□□□□□ -0.09
VTN-202ENST00000539746 CTSWP56202 376 aa14.51□□□□□ -0.09
VTN-202ENST00000539746 HLFQ16534 295 aa14.51□□□□□ -0.09
VTN-202ENST00000539746 USPL1Q5W0Q7 1092 aa14.51□□□□□ -0.09
VTN-202ENST00000539746 SLC16A10Q8TF71 515 aa14.51□□□□□ -0.09
VTN-202ENST00000539746 NLRP3Q96P20 1036 aa14.51□□□□□ -0.09
VTN-202ENST00000539746 TAF1LQ8IZX4 1826 aa14.5□□□□□ -0.09
VTN-202ENST00000539746 BCORQ6W2J9 1755 aa14.5□□□□□ -0.09
VTN-202ENST00000539746 PHF14O94880 888 aa14.5□□□□□ -0.09
VTN-202ENST00000539746 CASP7P55210 303 aa14.5□□□□□ -0.09
VTN-202ENST00000539746 LMBR1LQ6UX01 489 aa14.5□□□□□ -0.09
VTN-202ENST00000539746 TICAM2Q86XR7 235 aa14.5□□□□□ -0.09
VTN-202ENST00000539746 CNBD1Q8NA66 436 aa14.5□□□□□ -0.09
VTN-202ENST00000539746 LRRC4BQ9NT99 713 aa14.5□□□□□ -0.09
VTN-202ENST00000539746 MSH5O43196 834 aa14.49□□□□□ -0.09
VTN-202ENST00000539746 CSF1RP07333 972 aa14.49□□□□□ -0.09
VTN-202ENST00000539746 IFIT2P09913 472 aaKnown RBP14.49□□□□□ -0.09
VTN-202ENST00000539746 IGHMBP2P38935 993 aaKnown RBP14.49□□□□□ -0.09
VTN-202ENST00000539746 SLC10A5Q5PT55 438 aa14.49□□□□□ -0.09
VTN-202ENST00000539746 TMC4Q7Z404 712 aa14.49□□□□□ -0.09
VTN-202ENST00000539746 AKT1S1Q96B36 256 aa14.49□□□□□ -0.09
VTN-202ENST00000539746 FAM89AQ96GI7 184 aa14.49□□□□□ -0.09
VTN-202ENST00000539746 CAMKK2Q96RR4 588 aa14.49□□□□□ -0.09
VTN-202ENST00000539746 TMX4Q9H1E5 349 aaPredicted RBP14.49□□□□□ -0.09
VTN-202ENST00000539746 UPF2Q9HAU5 1272 aaKnown RBP14.49□□□□□ -0.09
VTN-202ENST00000539746 GPR108Q9NPR9 543 aa14.49□□□□□ -0.09
VTN-202ENST00000539746 TNS1Q9HBL0 1735 aaKnown RBP14.49□□□□□ -0.09
VTN-202ENST00000539746 NTSR2O95665 410 aa14.48□□□□□ -0.09
VTN-202ENST00000539746 LRRFIP1Q32MZ4 808 aaKnown RBP14.48□□□□□ -0.09
VTN-202ENST00000539746 PTF1AQ7RTS3 328 aa14.48□□□□□ -0.09
VTN-202ENST00000539746 SIRT2Q8IXJ6 389 aa14.48□□□□□ -0.09
VTN-202ENST00000539746 MPHOSPH8Q99549 860 aa14.48□□□□□ -0.09
VTN-202ENST00000539746 TTC41PQ6P2S7 1318 aa14.47□□□□□ -0.09
VTN-202ENST00000539746 MROH5Q6ZUA9 1318 aa14.47□□□□□ -0.09
VTN-202ENST00000539746 PNMA6EA0A0J9YXQ4 647 aa14.47□□□□□ -0.09
VTN-202ENST00000539746 SLC15A2Q16348 729 aa14.47□□□□□ -0.09
VTN-202ENST00000539746 SUSD4Q5VX71 490 aa14.47□□□□□ -0.09
VTN-202ENST00000539746 RHPN1Q8TCX5 695 aa14.47□□□□□ -0.09
VTN-202ENST00000539746 CEP126Q9P2H0 1117 aa14.47□□□□□ -0.09
VTN-202ENST00000539746 PARP3Q9Y6F1 533 aa14.47□□□□□ -0.09
VTN-202ENST00000539746 NUP98P52948 1817 aa14.46□□□□□ -0.09
VTN-202ENST00000539746 FOXO4P98177 505 aa14.46□□□□□ -0.09
VTN-202ENST00000539746 SF3B3Q15393 1217 aaKnown RBP14.46□□□□□ -0.09
VTN-202ENST00000539746 UBN2Q6ZU65 1347 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms