RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 KIAA1524Q8TCG1 905 aa15.77■□□□□ 0.11
UBE3B-209ENST00000539584 LGR6Q9HBX8 967 aa15.77■□□□□ 0.11
UBE3B-209ENST00000539584 DDX19AQ9NUU7 478 aaKnown RBP15.77■□□□□ 0.11
UBE3B-209ENST00000539584 MAP3K2Q9Y2U5 619 aa15.77■□□□□ 0.11
UBE3B-209ENST00000539584 NBPF6Q5VWK0 638 aa15.76■□□□□ 0.11
UBE3B-209ENST00000539584 BLOC1S2Q6QNY1 142 aa15.76■□□□□ 0.11
UBE3B-209ENST00000539584 AACSQ86V21 672 aa15.76■□□□□ 0.11
UBE3B-209ENST00000539584 SMAP1Q8IYB5 467 aaPredicted RBP15.76■□□□□ 0.11
UBE3B-209ENST00000539584 NBPF4Q96M43 638 aa15.76■□□□□ 0.11
UBE3B-209ENST00000539584 NUP62CLQ9H1M0 184 aa15.76■□□□□ 0.11
UBE3B-209ENST00000539584 TTC12Q9H892 705 aaPredicted RBP15.76■□□□□ 0.11
UBE3B-209ENST00000539584 KIF3AQ9Y496 699 aa15.76■□□□□ 0.11
UBE3B-209ENST00000539584 NPHP3Q7Z494 1330 aa15.76■□□□□ 0.11
UBE3B-209ENST00000539584 VPS37CA5D8V6 355 aaPredicted RBP15.75■□□□□ 0.11
UBE3B-209ENST00000539584 GRM8O00222 908 aa15.75■□□□□ 0.11
UBE3B-209ENST00000539584 GIGYF1O75420 1035 aaPredicted RBP15.75■□□□□ 0.11
UBE3B-209ENST00000539584 CCDC94Q9BW85 323 aaPredicted RBP15.75■□□□□ 0.11
UBE3B-209ENST00000539584 PHF8Q9UPP1 1060 aa15.75■□□□□ 0.11
UBE3B-209ENST00000539584 KIF13AQ9H1H9 1805 aa15.75■□□□□ 0.11
UBE3B-209ENST00000539584 JCADQ9P266 1359 aa15.75■□□□□ 0.11
UBE3B-209ENST00000539584 LTN1O94822 1766 aa15.75■□□□□ 0.11
UBE3B-209ENST00000539584 SLC27A2O14975 620 aa15.75■□□□□ 0.11
UBE3B-209ENST00000539584 C1orf141Q5JVX7 400 aa15.75■□□□□ 0.11
UBE3B-209ENST00000539584 ZNF530Q6P9A1 599 aaPredicted RBP15.75■□□□□ 0.11
UBE3B-209ENST00000539584 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.75■□□□□ 0.11
UBE3B-209ENST00000539584 RFX7Q2KHR2 1363 aa15.75■□□□□ 0.11
UBE3B-209ENST00000539584 RNMTO43148 476 aaKnown RBP15.74■□□□□ 0.11
UBE3B-209ENST00000539584 RBM43Q6ZSC3 357 aaKnown RBP15.74■□□□□ 0.11
UBE3B-209ENST00000539584 TICAM2Q86XR7 235 aa15.74■□□□□ 0.11
UBE3B-209ENST00000539584 TPCN1Q9ULQ1 816 aa15.74■□□□□ 0.11
UBE3B-209ENST00000539584 RPS6KB1P23443 525 aa15.73■□□□□ 0.11
UBE3B-209ENST00000539584 ST3GAL1Q11201 340 aa15.73■□□□□ 0.11
UBE3B-209ENST00000539584 NUTM2GQ5VZR2 741 aa15.73■□□□□ 0.11
UBE3B-209ENST00000539584 USHBP1Q8N6Y0 703 aa15.73■□□□□ 0.11
UBE3B-209ENST00000539584 MED23Q9ULK4 1368 aa15.73■□□□□ 0.11
UBE3B-209ENST00000539584 GOLGA6L4A6NEF3 574 aa15.73■□□□□ 0.11
UBE3B-209ENST00000539584 CPA1P15085 419 aa15.73■□□□□ 0.11
UBE3B-209ENST00000539584 KCNA6P17658 529 aa15.73■□□□□ 0.11
UBE3B-209ENST00000539584 TTC6Q86TZ1 520 aa15.73■□□□□ 0.11
UBE3B-209ENST00000539584 MRC1P22897 1456 aa15.72■□□□□ 0.11
UBE3B-209ENST00000539584 NMIQ13287 307 aaPredicted RBP15.72■□□□□ 0.11
UBE3B-209ENST00000539584 ZNF830Q96NB3 372 aaPredicted RBP15.72■□□□□ 0.11
UBE3B-209ENST00000539584 DDX21Q9NR30 783 aaKnown RBP eCLIP15.72■□□□□ 0.11
UBE3B-209ENST00000539584 SASH1O94885 1247 aa15.72■□□□□ 0.11
UBE3B-209ENST00000539584 TYRO3Q06418 890 aa15.72■□□□□ 0.11
UBE3B-209ENST00000539584 USPL1Q5W0Q7 1092 aa15.72■□□□□ 0.11
UBE3B-209ENST00000539584 LARP6Q9BRS8 491 aaKnown RBP15.72■□□□□ 0.11
UBE3B-209ENST00000539584 ZSCAN16Q9H4T2 348 aaPredicted RBP15.72■□□□□ 0.11
UBE3B-209ENST00000539584 KCNQ3O43525 872 aa15.71■□□□□ 0.11
UBE3B-209ENST00000539584 EAF2Q96CJ1 260 aaPredicted RBP15.71■□□□□ 0.11
UBE3B-209ENST00000539584 TNMDQ9H2S6 317 aa15.71■□□□□ 0.11
UBE3B-209ENST00000539584 NPHP4O75161 1426 aaPredicted RBP15.71■□□□□ 0.1
UBE3B-209ENST00000539584 LARP1Q6PKG0 1096 aaKnown RBP15.7■□□□□ 0.1
UBE3B-209ENST00000539584 SPATA32Q96LK8 384 aa15.7■□□□□ 0.1
UBE3B-209ENST00000539584 FSD1Q9BTV5 496 aa15.7■□□□□ 0.1
UBE3B-209ENST00000539584 PLCB2Q00722 1185 aa15.7■□□□□ 0.1
UBE3B-209ENST00000539584 C14orf37Q86TY3 774 aa15.7■□□□□ 0.1
UBE3B-209ENST00000539584 CHMP4CQ96CF2 233 aa15.7■□□□□ 0.1
UBE3B-209ENST00000539584 FAM227BQ96M60 508 aa15.7■□□□□ 0.1
UBE3B-209ENST00000539584 CLSTN2Q9H4D0 955 aa15.7■□□□□ 0.1
UBE3B-209ENST00000539584 CFAP45Q9UL16 551 aa15.7■□□□□ 0.1
UBE3B-209ENST00000539584 PA2G4Q9UQ80 394 aaKnown RBP15.7■□□□□ 0.1
UBE3B-209ENST00000539584 MRVI1Q9Y6F6 885 aa15.7■□□□□ 0.1
UBE3B-209ENST00000539584 NEXNQ0ZGT2 675 aa15.69■□□□□ 0.1
UBE3B-209ENST00000539584 MPRIPQ6WCQ1 1025 aa15.69■□□□□ 0.1
UBE3B-209ENST00000539584 CDC37L1Q7L3B6 337 aa15.69■□□□□ 0.1
UBE3B-209ENST00000539584 NECAB1Q8N987 351 aa15.69■□□□□ 0.1
UBE3B-209ENST00000539584 TDRD7Q8NHU6 1098 aaKnown RBP15.69■□□□□ 0.1
UBE3B-209ENST00000539584 SUCLG2Q96I99 432 aa15.69■□□□□ 0.1
UBE3B-209ENST00000539584 COL15A1P39059 1388 aa15.69■□□□□ 0.1
UBE3B-209ENST00000539584 CEBPAP49715 358 aaPredicted RBP15.68■□□□□ 0.1
UBE3B-209ENST00000539584 SYCP1Q15431 976 aa15.68■□□□□ 0.1
UBE3B-209ENST00000539584 ATL3Q6DD88 541 aa15.68■□□□□ 0.1
UBE3B-209ENST00000539584 LEO1Q8WVC0 666 aaPredicted RBP15.68■□□□□ 0.1
UBE3B-209ENST00000539584 KCNF1Q9H3M0 494 aa15.68■□□□□ 0.1
UBE3B-209ENST00000539584 BICC1Q9H694 974 aaKnown RBP15.68■□□□□ 0.1
UBE3B-209ENST00000539584 CTAGE5O15320 804 aa15.68■□□□□ 0.1
UBE3B-209ENST00000539584 AP5Z1O43299 807 aa15.68■□□□□ 0.1
UBE3B-209ENST00000539584 TOB2Q14106 344 aaPredicted RBP15.68■□□□□ 0.1
UBE3B-209ENST00000539584 CWF19L2Q2TBE0 894 aaKnown RBP15.68■□□□□ 0.1
UBE3B-209ENST00000539584 KAZALD1Q96I82 304 aa15.68■□□□□ 0.1
UBE3B-209ENST00000539584 LLPHQ9BRT6 129 aaKnown RBP15.68■□□□□ 0.1
UBE3B-209ENST00000539584 ANXA1P04083 346 aa15.67■□□□□ 0.1
UBE3B-209ENST00000539584 HMGB1P09429 215 aaKnown RBP15.67■□□□□ 0.1
UBE3B-209ENST00000539584 ATP5JP18859 108 aa15.67■□□□□ 0.1
UBE3B-209ENST00000539584 CDC25BP30305 580 aa15.67■□□□□ 0.1
UBE3B-209ENST00000539584 COPRSQ9NQ92 184 aa15.67■□□□□ 0.1
UBE3B-209ENST00000539584 DACT1Q9NYF0 836 aa15.67■□□□□ 0.1
UBE3B-209ENST00000539584 U3KPZ7 1027 aaPredicted RBP15.67■□□□□ 0.1
UBE3B-209ENST00000539584 ADAMTS7Q9UKP4 1686 aa15.67■□□□□ 0.1
UBE3B-209ENST00000539584 A0A0D9SFI3 127 aa15.67■□□□□ 0.1
UBE3B-209ENST00000539584 CTIFO43310 598 aaKnown RBP15.67■□□□□ 0.1
UBE3B-209ENST00000539584 TAF5LO75529 589 aa15.67■□□□□ 0.1
UBE3B-209ENST00000539584 LIG1P18858 919 aa15.67■□□□□ 0.1
UBE3B-209ENST00000539584 PSME1Q06323 249 aa15.67■□□□□ 0.1
UBE3B-209ENST00000539584 PLA2G4DQ86XP0 818 aa15.67■□□□□ 0.1
UBE3B-209ENST00000539584 GTF3C6Q969F1 213 aa15.67■□□□□ 0.1
UBE3B-209ENST00000539584 PLEKHG2Q9H7P9 1386 aa15.66■□□□□ 0.1
UBE3B-209ENST00000539584 NEMFO60524 1076 aa15.66■□□□□ 0.1
UBE3B-209ENST00000539584 ARHGEF25Q86VW2 580 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms