RNA–Protein interactions for RNA: ENST00000539449.2

RTN4IP1-204, Transcript of reticulon 4 interacting protein 1, humanhuman

TSL 2 BASIC

Gene RTN4IP1, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-204ENST00000539449 ARHGAP27Q6ZUM4 889 aa11.59□□□□□ -0.55
RTN4IP1-204ENST00000539449 SMARCC1Q92922 1105 aaPredicted RBP11.59□□□□□ -0.55
RTN4IP1-204ENST00000539449 MEIS3Q99687 375 aa11.59□□□□□ -0.55
RTN4IP1-204ENST00000539449 TEX13AQ9BXU3 409 aaPredicted RBP11.59□□□□□ -0.55
RTN4IP1-204ENST00000539449 RRAGCQ9HB90 399 aa11.59□□□□□ -0.55
RTN4IP1-204ENST00000539449 ZBTB1Q9Y2K1 713 aa11.59□□□□□ -0.55
RTN4IP1-204ENST00000539449 KDM2BQ8NHM5 1336 aa11.59□□□□□ -0.55
RTN4IP1-204ENST00000539449 KIF13BQ9NQT8 1826 aa11.58□□□□□ -0.56
RTN4IP1-204ENST00000539449 PXDNLA1KZ92 1463 aa11.58□□□□□ -0.56
RTN4IP1-204ENST00000539449 CCT4P50991 539 aaKnown RBP11.58□□□□□ -0.56
RTN4IP1-204ENST00000539449 C9orf131Q5VYM1 1079 aa11.58□□□□□ -0.56
RTN4IP1-204ENST00000539449 LINC00116Q8NCU8 138 aa11.58□□□□□ -0.56
RTN4IP1-204ENST00000539449 BCS1LQ9Y276 419 aa11.58□□□□□ -0.56
RTN4IP1-204ENST00000539449 STARD3NLO95772 234 aa11.57□□□□□ -0.56
RTN4IP1-204ENST00000539449 CWF19L2Q2TBE0 894 aaKnown RBP11.57□□□□□ -0.56
RTN4IP1-204ENST00000539449 ANKRD13DQ6ZTN6 518 aa11.57□□□□□ -0.56
RTN4IP1-204ENST00000539449 SMIM5Q71RC9 77 aa11.57□□□□□ -0.56
RTN4IP1-204ENST00000539449 RIC3Q7Z5B4 369 aa11.57□□□□□ -0.56
RTN4IP1-204ENST00000539449 PRDM10Q9NQV6 1147 aa11.57□□□□□ -0.56
RTN4IP1-204ENST00000539449 NUP98P52948 1817 aa11.56□□□□□ -0.56
RTN4IP1-204ENST00000539449 FOXN1O15353 648 aa11.56□□□□□ -0.56
RTN4IP1-204ENST00000539449 IGKV5-2P06315 115 aa11.56□□□□□ -0.56
RTN4IP1-204ENST00000539449 CRKLP46109 303 aaKnown RBP11.56□□□□□ -0.56
RTN4IP1-204ENST00000539449 MLLT1Q03111 559 aaPredicted RBP11.56□□□□□ -0.56
RTN4IP1-204ENST00000539449 SKAP1Q86WV1 359 aa11.56□□□□□ -0.56
RTN4IP1-204ENST00000539449 MYD88Q99836 296 aa11.56□□□□□ -0.56
RTN4IP1-204ENST00000539449 METTL22Q9BUU2 404 aaPredicted RBP11.56□□□□□ -0.56
RTN4IP1-204ENST00000539449 SRCIN1Q9C0H9 1055 aa11.56□□□□□ -0.56
RTN4IP1-204ENST00000539449 USP44Q9H0E7 712 aa11.56□□□□□ -0.56
RTN4IP1-204ENST00000539449 CCDC87Q9NVE4 849 aa11.56□□□□□ -0.56
RTN4IP1-204ENST00000539449 ZNF219Q9P2Y4 722 aaPredicted RBP11.56□□□□□ -0.56
RTN4IP1-204ENST00000539449 ZNF330Q9Y3S2 320 aaPredicted RBP11.56□□□□□ -0.56
RTN4IP1-204ENST00000539449 UBR3Q6ZT12 1888 aa11.55□□□□□ -0.56
RTN4IP1-204ENST00000539449 DDX58O95786 925 aaKnown RBP11.55□□□□□ -0.56
RTN4IP1-204ENST00000539449 SIRT2Q8IXJ6 389 aa11.55□□□□□ -0.56
RTN4IP1-204ENST00000539449 PLBD2Q8NHP8 589 aa11.55□□□□□ -0.56
RTN4IP1-204ENST00000539449 ZBTB3Q9H5J0 574 aa11.55□□□□□ -0.56
RTN4IP1-204ENST00000539449 BRCA1P38398 1863 aaKnown RBP11.55□□□□□ -0.56
RTN4IP1-204ENST00000539449 ARFGEF1Q9Y6D6 1849 aa11.54□□□□□ -0.56
RTN4IP1-204ENST00000539449 ATP5J2-PTCD1G3V325 749 aa11.54□□□□□ -0.56
RTN4IP1-204ENST00000539449 EIF5P55010 431 aaKnown RBP11.54□□□□□ -0.56
RTN4IP1-204ENST00000539449 AAMPQ13685 434 aa11.54□□□□□ -0.56
RTN4IP1-204ENST00000539449 JARID2Q92833 1246 aaPredicted RBP11.54□□□□□ -0.56
RTN4IP1-204ENST00000539449 ABHD8Q96I13 439 aa11.54□□□□□ -0.56
RTN4IP1-204ENST00000539449 C4BP0C0L5 1744 aa11.54□□□□□ -0.56
RTN4IP1-204ENST00000539449 ANKRD36CQ5JPF3 1778 aa11.54□□□□□ -0.56
RTN4IP1-204ENST00000539449 A0A0G2JLW4 131 aa11.53□□□□□ -0.56
RTN4IP1-204ENST00000539449 ALDH1L1O75891 902 aa11.53□□□□□ -0.56
RTN4IP1-204ENST00000539449 NBPF7P0C2Y1 421 aaPredicted RBP11.53□□□□□ -0.56
RTN4IP1-204ENST00000539449 IL6STP40189 918 aaPredicted RBP11.53□□□□□ -0.56
RTN4IP1-204ENST00000539449 HLFQ16534 295 aa11.53□□□□□ -0.56
RTN4IP1-204ENST00000539449 AMIGO3Q86WK7 504 aa11.53□□□□□ -0.56
RTN4IP1-204ENST00000539449 LINS1Q8NG48 757 aa11.53□□□□□ -0.56
RTN4IP1-204ENST00000539449 TBC1D2BQ9UPU7 963 aa11.53□□□□□ -0.56
RTN4IP1-204ENST00000539449 NEURL1BA8MQ27 555 aa11.52□□□□□ -0.57
RTN4IP1-204ENST00000539449 TGFB2P61812 414 aa11.52□□□□□ -0.57
RTN4IP1-204ENST00000539449 SAMD1Q6SPF0 538 aaPredicted RBP11.52□□□□□ -0.57
RTN4IP1-204ENST00000539449 SBF1O95248 1867 aa11.52□□□□□ -0.57
RTN4IP1-204ENST00000539449 MAP3K15Q6ZN16 1313 aa11.52□□□□□ -0.57
RTN4IP1-204ENST00000539449 BCORQ6W2J9 1755 aa11.51□□□□□ -0.57
RTN4IP1-204ENST00000539449 PHF14O94880 888 aa11.51□□□□□ -0.57
RTN4IP1-204ENST00000539449 HMGB2P26583 209 aaKnown RBP11.51□□□□□ -0.57
RTN4IP1-204ENST00000539449 CTCFP49711 727 aaPredicted RBP11.51□□□□□ -0.57
RTN4IP1-204ENST00000539449 RGS19P49795 217 aa11.51□□□□□ -0.57
RTN4IP1-204ENST00000539449 CEP85Q6P2H3 762 aa11.51□□□□□ -0.57
RTN4IP1-204ENST00000539449 CENPQQ7L2Z9 268 aaPredicted RBP11.51□□□□□ -0.57
RTN4IP1-204ENST00000539449 DZIP3Q86Y13 1208 aaKnown RBP11.51□□□□□ -0.57
RTN4IP1-204ENST00000539449 ANKRD44Q8N8A2 993 aa11.51□□□□□ -0.57
RTN4IP1-204ENST00000539449 AK7Q96M32 723 aa11.51□□□□□ -0.57
RTN4IP1-204ENST00000539449 ISCA1Q9BUE6 129 aa11.51□□□□□ -0.57
RTN4IP1-204ENST00000539449 CHMP4BQ9H444 224 aaKnown RBP11.51□□□□□ -0.57
RTN4IP1-204ENST00000539449 RNF181Q9P0P0 153 aa11.51□□□□□ -0.57
RTN4IP1-204ENST00000539449 LRRFIP2Q9Y608 721 aaKnown RBP11.51□□□□□ -0.57
RTN4IP1-204ENST00000539449 CNTNAP4Q9C0A0 1308 aa11.51□□□□□ -0.57
RTN4IP1-204ENST00000539449 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.5□□□□□ -0.57
RTN4IP1-204ENST00000539449 ABCB7O75027 752 aa11.5□□□□□ -0.57
RTN4IP1-204ENST00000539449 GNAI2P04899 355 aa11.5□□□□□ -0.57
RTN4IP1-204ENST00000539449 GNAI3P08754 354 aa11.5□□□□□ -0.57
RTN4IP1-204ENST00000539449 TCIRG1Q13488 830 aa11.5□□□□□ -0.57
RTN4IP1-204ENST00000539449 HDAC1Q13547 482 aaPredicted RBP11.5□□□□□ -0.57
RTN4IP1-204ENST00000539449 GCKRQ14397 625 aa11.5□□□□□ -0.57
RTN4IP1-204ENST00000539449 RC3H1Q5TC82 1133 aaKnown RBP11.5□□□□□ -0.57
RTN4IP1-204ENST00000539449 KAZALD1Q96I82 304 aa11.5□□□□□ -0.57
RTN4IP1-204ENST00000539449 SUCLG2Q96I99 432 aa11.5□□□□□ -0.57
RTN4IP1-204ENST00000539449 RWDD1Q9H446 243 aaPredicted RBP11.5□□□□□ -0.57
RTN4IP1-204ENST00000539449 MKRN1Q9UHC7 482 aaKnown RBP11.5□□□□□ -0.57
RTN4IP1-204ENST00000539449 UTYO14607 1347 aa11.5□□□□□ -0.57
RTN4IP1-204ENST00000539449 GRM8O00222 908 aa11.49□□□□□ -0.57
RTN4IP1-204ENST00000539449 RPS6KA4O75676 772 aa11.49□□□□□ -0.57
RTN4IP1-204ENST00000539449 CAMTA2O94983 1202 aa11.49□□□□□ -0.57
RTN4IP1-204ENST00000539449 UBTFL1P0CB47 393 aaPredicted RBP11.49□□□□□ -0.57
RTN4IP1-204ENST00000539449 CASP7P55210 303 aa11.49□□□□□ -0.57
RTN4IP1-204ENST00000539449 ATP8B2P98198 1209 aa11.49□□□□□ -0.57
RTN4IP1-204ENST00000539449 NEXNQ0ZGT2 675 aa11.49□□□□□ -0.57
RTN4IP1-204ENST00000539449 EPHA10Q5JZY3 1008 aa11.49□□□□□ -0.57
RTN4IP1-204ENST00000539449 GIGYF2Q6Y7W6 1299 aaKnown RBP11.49□□□□□ -0.57
RTN4IP1-204ENST00000539449 KIF6Q6ZMV9 814 aa11.49□□□□□ -0.57
RTN4IP1-204ENST00000539449 C4AP0C0L4 1744 aa11.49□□□□□ -0.57
RTN4IP1-204ENST00000539449 PNMA6EA0A0J9YXQ4 647 aa11.48□□□□□ -0.57
RTN4IP1-204ENST00000539449 MMP10P09238 476 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms