RNA–Protein interactions for RNA: ENST00000539369.1

LDHC-206, Transcript of lactate dehydrogenase C, humanhuman

TSL 1 (best)

Gene LDHC, Length 881 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-206ENST00000539369 MDFIQ99750 246 aa8.14□□□□□ -1.11
LDHC-206ENST00000539369 USP4Q13107 963 aa8.13□□□□□ -1.11
LDHC-206ENST00000539369 MCM6Q14566 821 aa8.13□□□□□ -1.11
LDHC-206ENST00000539369 STRN4Q9NRL3 753 aa8.13□□□□□ -1.11
LDHC-206ENST00000539369 RIMS1Q86UR5 1692 aaKnown RBP8.13□□□□□ -1.11
LDHC-206ENST00000539369 A0A1W2PNR3 127 aa8.12□□□□□ -1.11
LDHC-206ENST00000539369 FAM229AH3BQW9 127 aa8.12□□□□□ -1.11
LDHC-206ENST00000539369 KHNYNO15037 678 aaKnown RBP8.12□□□□□ -1.11
LDHC-206ENST00000539369 ZNF295-AS1Q8N0V1 137 aa8.12□□□□□ -1.11
LDHC-206ENST00000539369 C1orf216Q8TAB5 229 aa8.12□□□□□ -1.11
LDHC-206ENST00000539369 ARHGEF40Q8TER5 1519 aa8.12□□□□□ -1.11
LDHC-206ENST00000539369 WASHC4Q2M389 1173 aa8.11□□□□□ -1.11
LDHC-206ENST00000539369 OXLD1Q5BKU9 147 aa8.11□□□□□ -1.11
LDHC-206ENST00000539369 CTTNBP2Q8WZ74 1663 aa8.11□□□□□ -1.11
LDHC-206ENST00000539369 BTBD11A6QL63 1104 aa8.1□□□□□ -1.11
LDHC-206ENST00000539369 SCNN1DP51172 638 aa8.1□□□□□ -1.11
LDHC-206ENST00000539369 NBPF11Q86T75 865 aa8.1□□□□□ -1.11
LDHC-206ENST00000539369 AIDAQ96BJ3 306 aa8.1□□□□□ -1.11
LDHC-206ENST00000539369 CHIC2Q9UKJ5 165 aa8.1□□□□□ -1.11
LDHC-206ENST00000539369 SIGLEC1Q9BZZ2 1709 aa8.09□□□□□ -1.11
LDHC-206ENST00000539369 DENND4BO75064 1496 aaPredicted RBP8.09□□□□□ -1.11
LDHC-206ENST00000539369 ELOA3CA0A087WX78 387 aaPredicted RBP8.09□□□□□ -1.11
LDHC-206ENST00000539369 ELOA3DA6NLF2 546 aaPredicted RBP8.09□□□□□ -1.11
LDHC-206ENST00000539369 FAM157BP0CG42 384 aa8.09□□□□□ -1.11
LDHC-206ENST00000539369 SEMA3FQ13275 785 aa8.09□□□□□ -1.11
LDHC-206ENST00000539369 ELOA3BQ3SY89 546 aa8.09□□□□□ -1.11
LDHC-206ENST00000539369 PRRT3Q5FWE3 981 aa8.09□□□□□ -1.11
LDHC-206ENST00000539369 ELOA3Q8NG57 546 aa8.09□□□□□ -1.11
LDHC-206ENST00000539369 SIRT1Q96EB6 747 aa8.09□□□□□ -1.11
LDHC-206ENST00000539369 FHOD3Q2V2M9 1422 aa8.09□□□□□ -1.11
LDHC-206ENST00000539369 YEATS2Q9ULM3 1422 aa8.09□□□□□ -1.11
LDHC-206ENST00000539369 EFSO43281 561 aa8.08□□□□□ -1.12
LDHC-206ENST00000539369 APBA3O96018 575 aa8.08□□□□□ -1.12
LDHC-206ENST00000539369 MLECQ14165 292 aa8.08□□□□□ -1.12
LDHC-206ENST00000539369 ZIC5Q96T25 663 aa8.08□□□□□ -1.12
LDHC-206ENST00000539369 NIFKQ9BYG3 293 aaKnown RBP8.08□□□□□ -1.12
LDHC-206ENST00000539369 PRR12Q9ULL5 1215 aa8.08□□□□□ -1.12
LDHC-206ENST00000539369 POGZQ7Z3K3 1410 aa8.08□□□□□ -1.12
LDHC-206ENST00000539369 AKNAQ7Z591 1439 aa8.08□□□□□ -1.12
LDHC-206ENST00000539369 SPATA31D1Q6ZQQ2 1576 aa8.08□□□□□ -1.12
LDHC-206ENST00000539369 FANCAO15360 1455 aa8.07□□□□□ -1.12
LDHC-206ENST00000539369 PRXQ9BXM0 1461 aa8.07□□□□□ -1.12
LDHC-206ENST00000539369 SOX11P35716 441 aa8.07□□□□□ -1.12
LDHC-206ENST00000539369 LRP8Q14114 963 aa8.07□□□□□ -1.12
LDHC-206ENST00000539369 MAP7D1Q3KQU3 841 aa8.07□□□□□ -1.12
LDHC-206ENST00000539369 ARSJQ5FYB0 599 aaPredicted RBP8.07□□□□□ -1.12
LDHC-206ENST00000539369 PLPP7Q8NBV4 271 aa8.07□□□□□ -1.12
LDHC-206ENST00000539369 COG6Q9Y2V7 657 aa8.07□□□□□ -1.12
LDHC-206ENST00000539369 STARD13Q9Y3M8 1113 aa8.07□□□□□ -1.12
LDHC-206ENST00000539369 RICTORQ6R327 1708 aa8.06□□□□□ -1.12
LDHC-206ENST00000539369 SPDYE3A6NKU9 549 aa8.06□□□□□ -1.12
LDHC-206ENST00000539369 INHAP05111 366 aa8.06□□□□□ -1.12
LDHC-206ENST00000539369 GRIK4Q16099 956 aa8.06□□□□□ -1.12
LDHC-206ENST00000539369 C8orf86Q6ZUL3 223 aa8.06□□□□□ -1.12
LDHC-206ENST00000539369 SYT9Q86SS6 491 aa8.06□□□□□ -1.12
LDHC-206ENST00000539369 USP3Q9Y6I4 520 aa8.06□□□□□ -1.12
LDHC-206ENST00000539369 ZMYM4Q5VZL5 1548 aa8.06□□□□□ -1.12
LDHC-206ENST00000539369 ZFYVE16Q7Z3T8 1539 aa8.06□□□□□ -1.12
LDHC-206ENST00000539369 NUP153P49790 1475 aaKnown RBP8.06□□□□□ -1.12
LDHC-206ENST00000539369 TTC37Q6PGP7 1564 aa8.05□□□□□ -1.12
LDHC-206ENST00000539369 M0R082 166 aa8.05□□□□□ -1.12
LDHC-206ENST00000539369 HYAL3O43820 417 aaPredicted RBP8.05□□□□□ -1.12
LDHC-206ENST00000539369 CEBPAP49715 358 aaPredicted RBP8.05□□□□□ -1.12
LDHC-206ENST00000539369 GDF10P55107 478 aa8.05□□□□□ -1.12
LDHC-206ENST00000539369 ZNF417Q8TAU3 575 aa8.05□□□□□ -1.12
LDHC-206ENST00000539369 ZNF587Q96SQ5 575 aaPredicted RBP8.05□□□□□ -1.12
LDHC-206ENST00000539369 GOLGA2P5Q9HBQ8 144 aa8.05□□□□□ -1.12
LDHC-206ENST00000539369 MARK1Q9P0L2 795 aa8.05□□□□□ -1.12
LDHC-206ENST00000539369 IQSEC3Q9UPP2 1182 aaPredicted RBP8.05□□□□□ -1.12
LDHC-206ENST00000539369 RAPGEF6Q8TEU7 1601 aa8.04□□□□□ -1.12
LDHC-206ENST00000539369 SMTNP53814 917 aa8.04□□□□□ -1.12
LDHC-206ENST00000539369 SAMD5Q5TGI4 173 aa8.04□□□□□ -1.12
LDHC-206ENST00000539369 PRDM6Q9NQX0 595 aa8.04□□□□□ -1.12
LDHC-206ENST00000539369 ADARB2-AS1A8MUL3 147 aa8.03□□□□□ -1.12
LDHC-206ENST00000539369 PIK3CDO00329 1044 aa8.03□□□□□ -1.12
LDHC-206ENST00000539369 ALBP02768 609 aa8.03□□□□□ -1.12
LDHC-206ENST00000539369 NID1P14543 1247 aa8.03□□□□□ -1.12
LDHC-206ENST00000539369 FAM9AQ8IZU1 332 aaPredicted RBP8.03□□□□□ -1.12
LDHC-206ENST00000539369 EFCAB5A4FU69 1503 aa8.03□□□□□ -1.12
LDHC-206ENST00000539369 ARHGEF12Q9NZN5 1544 aa8.03□□□□□ -1.12
LDHC-206ENST00000539369 STRCQ7RTU9 1775 aa8.02□□□□□ -1.13
LDHC-206ENST00000539369 SAMD9Q5K651 1589 aa8.02□□□□□ -1.13
LDHC-206ENST00000539369 MAGI2Q86UL8 1455 aa8.02□□□□□ -1.13
LDHC-206ENST00000539369 H2AFB1P0C5Y9 115 aa8.02□□□□□ -1.13
LDHC-206ENST00000539369 H2AFB2P0C5Z0 115 aa8.02□□□□□ -1.13
LDHC-206ENST00000539369 ALAS2P22557 587 aa8.02□□□□□ -1.13
LDHC-206ENST00000539369 NBPF1Q3BBV0 1214 aa8.02□□□□□ -1.13
LDHC-206ENST00000539369 MICALL1Q8N3F8 863 aa8.02□□□□□ -1.13
LDHC-206ENST00000539369 POM121Q96HA1 1249 aa8.02□□□□□ -1.13
LDHC-206ENST00000539369 NACC1Q96RE7 527 aa8.02□□□□□ -1.13
LDHC-206ENST00000539369 ZDHHC3Q9NYG2 299 aa8.02□□□□□ -1.13
LDHC-206ENST00000539369 HECW1Q76N89 1606 aa8.02□□□□□ -1.13
LDHC-206ENST00000539369 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.02□□□□□ -1.13
LDHC-206ENST00000539369 FER1L4A9Z1Z3 1794 aa8.02□□□□□ -1.13
LDHC-206ENST00000539369 PLEKHD1A6NEE1 506 aa8.01□□□□□ -1.13
LDHC-206ENST00000539369 TRIM28Q13263 835 aaKnown RBP8.01□□□□□ -1.13
LDHC-206ENST00000539369 LAMC2Q13753 1193 aa8.01□□□□□ -1.13
LDHC-206ENST00000539369 WWC1Q8IX03 1113 aa8.01□□□□□ -1.13
LDHC-206ENST00000539369 PREX1Q8TCU6 1659 aa8.01□□□□□ -1.13
LDHC-206ENST00000539369 SIN3BO75182 1162 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms