RNA–Protein interactions for RNA: ENST00000538907.1

PTPRO-207, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 4

Gene PTPRO, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-207ENST00000538907 SLC6A14Q9UN76 642 aa9.33□□□□□ -0.92
PTPRO-207ENST00000538907 C9orf172C9J069 976 aa9.32□□□□□ -0.92
PTPRO-207ENST00000538907 PPP1R12BO60237 982 aaPredicted RBP9.32□□□□□ -0.92
PTPRO-207ENST00000538907 ATP1A2P50993 1020 aa9.32□□□□□ -0.92
PTPRO-207ENST00000538907 BTLAQ7Z6A9 289 aa9.32□□□□□ -0.92
PTPRO-207ENST00000538907 ALDH16A1Q8IZ83 802 aa9.32□□□□□ -0.92
PTPRO-207ENST00000538907 UBE2OQ9C0C9 1292 aaKnown RBP9.32□□□□□ -0.92
PTPRO-207ENST00000538907 IGFLR1Q9H665 355 aa9.32□□□□□ -0.92
PTPRO-207ENST00000538907 MKRN1Q9UHC7 482 aaKnown RBP9.32□□□□□ -0.92
PTPRO-207ENST00000538907 ATP9BO43861 1147 aa9.31□□□□□ -0.92
PTPRO-207ENST00000538907 HDGFL1Q5TGJ6 251 aa9.31□□□□□ -0.92
PTPRO-207ENST00000538907 SIX5Q8N196 739 aa9.31□□□□□ -0.92
PTPRO-207ENST00000538907 LARGE2Q8N3Y3 721 aa9.31□□□□□ -0.92
PTPRO-207ENST00000538907 ZFP64Q9NPA5 681 aa9.31□□□□□ -0.92
PTPRO-207ENST00000538907 NAGPAQ9UK23 515 aa9.31□□□□□ -0.92
PTPRO-207ENST00000538907 PALM3A6NDB9 673 aaPredicted RBP9.3□□□□□ -0.92
PTPRO-207ENST00000538907 ELNP15502 786 aa9.3□□□□□ -0.92
PTPRO-207ENST00000538907 LENG1Q96BZ8 264 aaPredicted RBP9.3□□□□□ -0.92
PTPRO-207ENST00000538907 ZNF594Q96JF6 807 aaPredicted RBP9.3□□□□□ -0.92
PTPRO-207ENST00000538907 C2orf49Q9BVC5 232 aaPredicted RBP9.3□□□□□ -0.92
PTPRO-207ENST00000538907 GSX2Q9BZM3 304 aa9.3□□□□□ -0.92
PTPRO-207ENST00000538907 JPH1Q9HDC5 661 aaPredicted RBP9.3□□□□□ -0.92
PTPRO-207ENST00000538907 ATAD2Q6PL18 1390 aa9.29□□□□□ -0.92
PTPRO-207ENST00000538907 H2AFB1P0C5Y9 115 aa9.29□□□□□ -0.92
PTPRO-207ENST00000538907 H2AFB2P0C5Z0 115 aa9.29□□□□□ -0.92
PTPRO-207ENST00000538907 GRNP28799 593 aaKnown RBP9.29□□□□□ -0.92
PTPRO-207ENST00000538907 AFF1P51825 1210 aaKnown RBP9.29□□□□□ -0.92
PTPRO-207ENST00000538907 TXNRD3Q86VQ6 643 aa9.29□□□□□ -0.92
PTPRO-207ENST00000538907 DNAJB12Q9NXW2 375 aaKnown RBP9.29□□□□□ -0.92
PTPRO-207ENST00000538907 CHMP3Q9Y3E7 222 aa9.29□□□□□ -0.92
PTPRO-207ENST00000538907 PSAPL1Q6NUJ1 521 aa9.28□□□□□ -0.92
PTPRO-207ENST00000538907 GAS2L2Q8NHY3 880 aa9.28□□□□□ -0.92
PTPRO-207ENST00000538907 NGLY1Q96IV0 654 aa9.28□□□□□ -0.92
PTPRO-207ENST00000538907 BCS1LQ9Y276 419 aa9.28□□□□□ -0.92
PTPRO-207ENST00000538907 WWC1Q8IX03 1113 aa9.27□□□□□ -0.93
PTPRO-207ENST00000538907 DMRTC2Q8IXT2 367 aaPredicted RBP9.27□□□□□ -0.93
PTPRO-207ENST00000538907 STAG2Q8N3U4 1231 aa9.27□□□□□ -0.93
PTPRO-207ENST00000538907 SCG3Q8WXD2 468 aaKnown RBP9.27□□□□□ -0.93
PTPRO-207ENST00000538907 SSBP4Q9BWG4 385 aaPredicted RBP9.27□□□□□ -0.93
PTPRO-207ENST00000538907 DMGDHQ9UI17 866 aaKnown RBP9.27□□□□□ -0.93
PTPRO-207ENST00000538907 LGR5O75473 907 aa9.26□□□□□ -0.93
PTPRO-207ENST00000538907 KRTAP1-3Q8IUG1 177 aa9.26□□□□□ -0.93
PTPRO-207ENST00000538907 FMR1NBQ8N0W7 255 aaPredicted RBP9.26□□□□□ -0.93
PTPRO-207ENST00000538907 PLAURQ03405 335 aa9.25□□□□□ -0.93
PTPRO-207ENST00000538907 CHMP7Q8WUX9 453 aaPredicted RBP9.25□□□□□ -0.93
PTPRO-207ENST00000538907 KRTAP4-12Q9BQ66 201 aa9.25□□□□□ -0.93
PTPRO-207ENST00000538907 RAD21O60216 631 aa9.24□□□□□ -0.93
PTPRO-207ENST00000538907 NFKB1P19838 968 aa9.24□□□□□ -0.93
PTPRO-207ENST00000538907 RAC1P63000 192 aa9.24□□□□□ -0.93
PTPRO-207ENST00000538907 NRG1Q02297 640 aaPredicted RBP9.24□□□□□ -0.93
PTPRO-207ENST00000538907 TP53INP1Q96A56 240 aa9.24□□□□□ -0.93
PTPRO-207ENST00000538907 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.24□□□□□ -0.93
PTPRO-207ENST00000538907 GRIK5Q16478 980 aa9.23□□□□□ -0.93
PTPRO-207ENST00000538907 ZBTB42B2RXF5 422 aa9.22□□□□□ -0.93
PTPRO-207ENST00000538907 HYAL3O43820 417 aaPredicted RBP9.22□□□□□ -0.93
PTPRO-207ENST00000538907 RGS9O75916 674 aaPredicted RBP9.22□□□□□ -0.93
PTPRO-207ENST00000538907 CCINQ13939 588 aa9.22□□□□□ -0.93
PTPRO-207ENST00000538907 EFCC1Q9HA90 598 aa9.22□□□□□ -0.93
PTPRO-207ENST00000538907 RASA1P20936 1047 aa9.21□□□□□ -0.94
PTPRO-207ENST00000538907 LRP8Q14114 963 aa9.21□□□□□ -0.94
PTPRO-207ENST00000538907 IER5Q5VY09 327 aa9.21□□□□□ -0.94
PTPRO-207ENST00000538907 LPIN3Q9BQK8 851 aa9.21□□□□□ -0.94
PTPRO-207ENST00000538907 ZFATQ9P243 1243 aa9.21□□□□□ -0.94
PTPRO-207ENST00000538907 TFIP11Q9UBB9 837 aaKnown RBP9.21□□□□□ -0.94
PTPRO-207ENST00000538907 USP21Q9UK80 565 aa9.21□□□□□ -0.94
PTPRO-207ENST00000538907 TGFBR3LH3BV60 316 aa9.2□□□□□ -0.94
PTPRO-207ENST00000538907 CPB1P15086 417 aa9.2□□□□□ -0.94
PTPRO-207ENST00000538907 UBTFP17480 764 aaKnown RBP9.2□□□□□ -0.94
PTPRO-207ENST00000538907 SEC13P55735 322 aa9.2□□□□□ -0.94
PTPRO-207ENST00000538907 RTN1Q16799 776 aa9.2□□□□□ -0.94
PTPRO-207ENST00000538907 MSL1Q68DK7 614 aa9.2□□□□□ -0.94
PTPRO-207ENST00000538907 NBPF11Q86T75 865 aa9.2□□□□□ -0.94
PTPRO-207ENST00000538907 PNMA5Q96PV4 448 aa9.2□□□□□ -0.94
PTPRO-207ENST00000538907 FAM35AQ86V20 835 aa9.19□□□□□ -0.94
PTPRO-207ENST00000538907 INPP5BP32019 993 aa9.18□□□□□ -0.94
PTPRO-207ENST00000538907 HIF1AQ16665 826 aa9.18□□□□□ -0.94
PTPRO-207ENST00000538907 PERM1Q5SV97 790 aa9.18□□□□□ -0.94
PTPRO-207ENST00000538907 WFDC12Q8WWY7 111 aa9.18□□□□□ -0.94
PTPRO-207ENST00000538907 KLK14Q9P0G3 267 aa9.18□□□□□ -0.94
PTPRO-207ENST00000538907 MAFBQ9Y5Q3 323 aaPredicted RBP9.18□□□□□ -0.94
PTPRO-207ENST00000538907 TARSP26639 723 aaKnown RBP9.17□□□□□ -0.94
PTPRO-207ENST00000538907 NOS3P29474 1203 aa9.17□□□□□ -0.94
PTPRO-207ENST00000538907 IREB2P48200 963 aaKnown RBP9.17□□□□□ -0.94
PTPRO-207ENST00000538907 CRTC2Q53ET0 693 aaPredicted RBP9.17□□□□□ -0.94
PTPRO-207ENST00000538907 KRT25Q7Z3Z0 450 aa9.17□□□□□ -0.94
PTPRO-207ENST00000538907 FBXO11Q86XK2 927 aa9.17□□□□□ -0.94
PTPRO-207ENST00000538907 IFT43Q96FT9 208 aa9.17□□□□□ -0.94
PTPRO-207ENST00000538907 RBM19Q9Y4C8 960 aaKnown RBP9.17□□□□□ -0.94
PTPRO-207ENST00000538907 MAP3K6O95382 1288 aa9.16□□□□□ -0.94
PTPRO-207ENST00000538907 IDH3AP50213 366 aa9.16□□□□□ -0.94
PTPRO-207ENST00000538907 MLLT1Q03111 559 aaPredicted RBP9.16□□□□□ -0.94
PTPRO-207ENST00000538907 MEGF10Q96KG7 1140 aa9.16□□□□□ -0.94
PTPRO-207ENST00000538907 HINFPQ9BQA5 517 aa9.16□□□□□ -0.94
PTPRO-207ENST00000538907 DEAF1O75398 565 aaPredicted RBP9.15□□□□□ -0.94
PTPRO-207ENST00000538907 DPYDQ12882 1025 aa9.15□□□□□ -0.94
PTPRO-207ENST00000538907 PTK7Q13308 1070 aa9.15□□□□□ -0.94
PTPRO-207ENST00000538907 LCE3BQ5TA77 95 aa9.15□□□□□ -0.94
PTPRO-207ENST00000538907 DHX32Q7L7V1 743 aaKnown RBP9.15□□□□□ -0.94
PTPRO-207ENST00000538907 TRPM4Q8TD43 1214 aa9.15□□□□□ -0.94
PTPRO-207ENST00000538907 FRRS1LQ9P0K9 344 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms