RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 MTFR1LQ9H019 292 aa21.77■■□□□ 1.07
CLN6-202ENST00000538696 CARMIL3Q8ND23 1372 aa21.76■■□□□ 1.07
CLN6-202ENST00000538696 MS4A1P11836 297 aa21.76■■□□□ 1.07
CLN6-202ENST00000538696 TRIM28Q13263 835 aaKnown RBP21.76■■□□□ 1.07
CLN6-202ENST00000538696 DDX60Q8IY21 1712 aaKnown RBP21.76■■□□□ 1.07
CLN6-202ENST00000538696 TMEM57Q8N5G2 664 aa21.76■■□□□ 1.07
CLN6-202ENST00000538696 CCDC136Q96JN2 1154 aa21.76■■□□□ 1.07
CLN6-202ENST00000538696 SRCIN1Q9C0H9 1055 aa21.76■■□□□ 1.07
CLN6-202ENST00000538696 POLRMTO00411 1230 aaKnown RBP21.75■■□□□ 1.07
CLN6-202ENST00000538696 ALDH1L1O75891 902 aa21.75■■□□□ 1.07
CLN6-202ENST00000538696 MMP10P09238 476 aa21.75■■□□□ 1.07
CLN6-202ENST00000538696 CCT4P50991 539 aaKnown RBP21.75■■□□□ 1.07
CLN6-202ENST00000538696 PARP10Q53GL7 1025 aa21.75■■□□□ 1.07
CLN6-202ENST00000538696 SUSD4Q5VX71 490 aa21.75■■□□□ 1.07
CLN6-202ENST00000538696 INTS3Q68E01 1043 aaKnown RBP21.75■■□□□ 1.07
CLN6-202ENST00000538696 SETDB2Q96T68 719 aa21.75■■□□□ 1.07
CLN6-202ENST00000538696 IBTKQ9P2D0 1353 aaPredicted RBP21.74■■□□□ 1.07
CLN6-202ENST00000538696 CCDC191Q8NCU4 936 aa21.74■■□□□ 1.07
CLN6-202ENST00000538696 CWC25Q9NXE8 425 aaPredicted RBP21.74■■□□□ 1.07
CLN6-202ENST00000538696 ATF5Q9Y2D1 282 aaPredicted RBP21.74■■□□□ 1.07
CLN6-202ENST00000538696 ANKRD31Q8N7Z5 1873 aa21.73■■□□□ 1.07
CLN6-202ENST00000538696 NTSR2O95665 410 aa21.73■■□□□ 1.07
CLN6-202ENST00000538696 MVPQ14764 893 aaKnown RBP21.73■■□□□ 1.07
CLN6-202ENST00000538696 TNRC6CQ9HCJ0 1690 aaKnown RBP21.73■■□□□ 1.07
CLN6-202ENST00000538696 FAM177BA6PVY3 158 aa21.72■■□□□ 1.07
CLN6-202ENST00000538696 GCKRQ14397 625 aa21.72■■□□□ 1.07
CLN6-202ENST00000538696 MYH3P11055 1940 aa21.71■■□□□ 1.07
CLN6-202ENST00000538696 SERPINB2P05120 415 aa21.71■■□□□ 1.07
CLN6-202ENST00000538696 KIF13BQ9NQT8 1826 aa21.71■■□□□ 1.07
CLN6-202ENST00000538696 PPP1R42Q7Z4L9 355 aa21.7■■□□□ 1.06
CLN6-202ENST00000538696 ITPRIPQ8IWB1 547 aa21.7■■□□□ 1.06
CLN6-202ENST00000538696 SGIP1Q9BQI5 828 aa21.7■■□□□ 1.06
CLN6-202ENST00000538696 UTP14AQ9BVJ6 771 aaKnown RBP21.7■■□□□ 1.06
CLN6-202ENST00000538696 PARP3Q9Y6F1 533 aa21.7■■□□□ 1.06
CLN6-202ENST00000538696 ABCC12Q96J65 1359 aa21.69■■□□□ 1.06
CLN6-202ENST00000538696 NBPF5PQ86XG9 351 aaPredicted RBP21.69■■□□□ 1.06
CLN6-202ENST00000538696 PCCAP05165 728 aaPredicted RBP21.68■■□□□ 1.06
CLN6-202ENST00000538696 PTGER2P43116 358 aa21.68■■□□□ 1.06
CLN6-202ENST00000538696 PRR5LQ6MZQ0 368 aa21.68■■□□□ 1.06
CLN6-202ENST00000538696 NUTM1Q86Y26 1132 aa21.68■■□□□ 1.06
CLN6-202ENST00000538696 JARID2Q92833 1246 aaPredicted RBP21.68■■□□□ 1.06
CLN6-202ENST00000538696 NYXQ9GZU5 481 aa21.68■■□□□ 1.06
CLN6-202ENST00000538696 TRMT112Q9UI30 125 aaKnown RBP21.68■■□□□ 1.06
CLN6-202ENST00000538696 H7C1W4 665 aa21.67■■□□□ 1.06
CLN6-202ENST00000538696 GRM8O00222 908 aa21.67■■□□□ 1.06
CLN6-202ENST00000538696 CASP7P55210 303 aa21.67■■□□□ 1.06
CLN6-202ENST00000538696 CNBD1Q8NA66 436 aa21.67■■□□□ 1.06
CLN6-202ENST00000538696 ZBTB38Q8NAP3 1195 aaPredicted RBP21.67■■□□□ 1.06
CLN6-202ENST00000538696 UTYO14607 1347 aa21.67■■□□□ 1.06
CLN6-202ENST00000538696 SH3TC1Q8TE82 1336 aa21.67■■□□□ 1.06
CLN6-202ENST00000538696 COL11A2P13942 1736 aaPredicted RBP21.66■■□□□ 1.06
CLN6-202ENST00000538696 POLD1P28340 1107 aa21.66■■□□□ 1.06
CLN6-202ENST00000538696 ERFEQ4G0M1 354 aa21.66■■□□□ 1.06
CLN6-202ENST00000538696 RTL5Q5HYW3 569 aaPredicted RBP21.66■■□□□ 1.06
CLN6-202ENST00000538696 SYNE4Q8N205 404 aa21.66■■□□□ 1.06
CLN6-202ENST00000538696 FAM89AQ96GI7 184 aa21.66■■□□□ 1.06
CLN6-202ENST00000538696 MEIS3Q99687 375 aa21.66■■□□□ 1.06
CLN6-202ENST00000538696 USP44Q9H0E7 712 aa21.66■■□□□ 1.06
CLN6-202ENST00000538696 RIC1Q4ADV7 1423 aa21.65■■□□□ 1.06
CLN6-202ENST00000538696 C10orf71Q711Q0 1435 aa21.65■■□□□ 1.06
CLN6-202ENST00000538696 TPTE2Q6XPS3 522 aa21.65■■□□□ 1.06
CLN6-202ENST00000538696 UBE3BQ7Z3V4 1068 aa21.65■■□□□ 1.06
CLN6-202ENST00000538696 CCDC24Q8N4L8 307 aa21.65■■□□□ 1.06
CLN6-202ENST00000538696 SPON1Q9HCB6 807 aa21.65■■□□□ 1.06
CLN6-202ENST00000538696 C9orf78Q9NZ63 289 aaPredicted RBP21.65■■□□□ 1.06
CLN6-202ENST00000538696 DDX19BQ9UMR2 479 aa21.65■■□□□ 1.06
CLN6-202ENST00000538696 KIAA1551Q9HCM1 1747 aa21.65■■□□□ 1.06
CLN6-202ENST00000538696 CDHR2Q9BYE9 1310 aa21.65■■□□□ 1.06
CLN6-202ENST00000538696 LRP5O75197 1615 aa21.65■■□□□ 1.06
CLN6-202ENST00000538696 NBPF7P0C2Y1 421 aaPredicted RBP21.64■■□□□ 1.05
CLN6-202ENST00000538696 DLEC1Q9Y238 1755 aa21.63■■□□□ 1.05
CLN6-202ENST00000538696 ZBTB7BO15156 539 aaPredicted RBP21.62■■□□□ 1.05
CLN6-202ENST00000538696 NPHP1O15259 732 aa21.62■■□□□ 1.05
CLN6-202ENST00000538696 GTF2E1P29083 439 aaPredicted RBP21.62■■□□□ 1.05
CLN6-202ENST00000538696 ST5P78524 1137 aa21.62■■□□□ 1.05
CLN6-202ENST00000538696 AAMPQ13685 434 aa21.62■■□□□ 1.05
CLN6-202ENST00000538696 IRS4O14654 1257 aaPredicted RBP21.61■■□□□ 1.05
CLN6-202ENST00000538696 SUCLG2Q96I99 432 aa21.61■■□□□ 1.05
CLN6-202ENST00000538696 UBTFL1P0CB47 393 aaPredicted RBP21.6■■□□□ 1.05
CLN6-202ENST00000538696 HCLS1P14317 486 aaPredicted RBP21.6■■□□□ 1.05
CLN6-202ENST00000538696 SLC10A5Q5PT55 438 aa21.6■■□□□ 1.05
CLN6-202ENST00000538696 GNAI3P08754 354 aa21.59■■□□□ 1.05
CLN6-202ENST00000538696 C3orf67Q6ZVT6 689 aa21.59■■□□□ 1.05
CLN6-202ENST00000538696 KDM2BQ8NHM5 1336 aa21.59■■□□□ 1.05
CLN6-202ENST00000538696 KAZALD1Q96I82 304 aa21.59■■□□□ 1.05
CLN6-202ENST00000538696 PLA2G12BQ9BX93 195 aa21.59■■□□□ 1.05
CLN6-202ENST00000538696 PCDHB15Q9Y5E8 787 aa21.59■■□□□ 1.05
CLN6-202ENST00000538696 EPHA10Q5JZY3 1008 aa21.58■■□□□ 1.05
CLN6-202ENST00000538696 CACNA1SQ13698 1873 aa21.58■■□□□ 1.05
CLN6-202ENST00000538696 ZBTB40Q9NUA8 1239 aa21.57■■□□□ 1.04
CLN6-202ENST00000538696 LRRFIP2Q9Y608 721 aaKnown RBP21.57■■□□□ 1.04
CLN6-202ENST00000538696 TAF1P21675 1872 aa21.57■■□□□ 1.04
CLN6-202ENST00000538696 SPEF2Q9C093 1822 aa21.57■■□□□ 1.04
CLN6-202ENST00000538696 PDE8AO60658 829 aa21.56■■□□□ 1.04
CLN6-202ENST00000538696 BRIP1Q9BX63 1249 aa21.56■■□□□ 1.04
CLN6-202ENST00000538696 C1orf115Q9H7X2 142 aa21.56■■□□□ 1.04
CLN6-202ENST00000538696 BRCA1P38398 1863 aaKnown RBP21.56■■□□□ 1.04
CLN6-202ENST00000538696 COL4A1P02462 1669 aa21.56■■□□□ 1.04
CLN6-202ENST00000538696 CTSWP56202 376 aa21.55■■□□□ 1.04
CLN6-202ENST00000538696 FOXO4P98177 505 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms