RNA–Protein interactions for RNA: ENST00000538647.1

SMCO2-204, Transcript of single-pass membrane protein with coiled-coil domains 2, humanhuman

TSL 5

Gene SMCO2, Length 287 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO2-204ENST00000538647 CFHR5Q9BXR6 569 aa15.46■□□□□ 0.07
SMCO2-204ENST00000538647 STRN4Q9NRL3 753 aa15.46■□□□□ 0.07
SMCO2-204ENST00000538647 HCN2Q9UL51 889 aa15.46■□□□□ 0.07
SMCO2-204ENST00000538647 USP20Q9Y2K6 914 aa15.46■□□□□ 0.07
SMCO2-204ENST00000538647 SFSWAPQ12872 951 aaKnown RBP15.45■□□□□ 0.06
SMCO2-204ENST00000538647 RGL4Q8IZJ4 473 aa15.45■□□□□ 0.06
SMCO2-204ENST00000538647 NFX1Q12986 1120 aaKnown RBP15.44■□□□□ 0.06
SMCO2-204ENST00000538647 GPR152Q8TDT2 470 aa15.44■□□□□ 0.06
SMCO2-204ENST00000538647 EPB42P16452 691 aa15.43■□□□□ 0.06
SMCO2-204ENST00000538647 CD33P20138 364 aa15.43■□□□□ 0.06
SMCO2-204ENST00000538647 FGFR3P22607 806 aa15.43■□□□□ 0.06
SMCO2-204ENST00000538647 GRNP28799 593 aaKnown RBP15.43■□□□□ 0.06
SMCO2-204ENST00000538647 IRF7Q92985 503 aa15.43■□□□□ 0.06
SMCO2-204ENST00000538647 ZNF775Q96BV0 537 aaPredicted RBP15.43■□□□□ 0.06
SMCO2-204ENST00000538647 KCNH4Q9UQ05 1017 aa15.43■□□□□ 0.06
SMCO2-204ENST00000538647 RTCBQ9Y3I0 505 aaKnown RBP15.43■□□□□ 0.06
SMCO2-204ENST00000538647 FZD6O60353 706 aa15.42■□□□□ 0.06
SMCO2-204ENST00000538647 DNM1Q05193 864 aaKnown RBP15.42■□□□□ 0.06
SMCO2-204ENST00000538647 LAMC2Q13753 1193 aa15.42■□□□□ 0.06
SMCO2-204ENST00000538647 EDEM1Q92611 657 aa15.42■□□□□ 0.06
SMCO2-204ENST00000538647 FAM13BQ9NYF5 915 aa15.42■□□□□ 0.06
SMCO2-204ENST00000538647 MARK1Q9P0L2 795 aa15.42■□□□□ 0.06
SMCO2-204ENST00000538647 KCNQ4P56696 695 aa15.41■□□□□ 0.06
SMCO2-204ENST00000538647 GAS6Q14393 721 aa15.41■□□□□ 0.06
SMCO2-204ENST00000538647 CCDC87Q9NVE4 849 aa15.41■□□□□ 0.06
SMCO2-204ENST00000538647 GRIN2CQ14957 1233 aa15.4■□□□□ 0.06
SMCO2-204ENST00000538647 CMTR1Q8N1G2 835 aaKnown RBP15.4■□□□□ 0.06
SMCO2-204ENST00000538647 PIK3R5Q8WYR1 880 aa15.4■□□□□ 0.06
SMCO2-204ENST00000538647 POLIQ9UNA4 740 aa15.39■□□□□ 0.05
SMCO2-204ENST00000538647 PDGFAP04085 211 aa15.38■□□□□ 0.05
SMCO2-204ENST00000538647 MZF1P28698 734 aaPredicted RBP15.38■□□□□ 0.05
SMCO2-204ENST00000538647 CTBSQ01459 385 aa15.38■□□□□ 0.05
SMCO2-204ENST00000538647 NUDT16Q96DE0 195 aaKnown RBP15.38■□□□□ 0.05
SMCO2-204ENST00000538647 COL25A1Q9BXS0 654 aaPredicted RBP15.38■□□□□ 0.05
SMCO2-204ENST00000538647 BRPF3Q9ULD4 1205 aa15.38■□□□□ 0.05
SMCO2-204ENST00000538647 LCE2CQ5TA81 110 aa15.37■□□□□ 0.05
SMCO2-204ENST00000538647 RNFT1Q5M7Z0 435 aa15.36■□□□□ 0.05
SMCO2-204ENST00000538647 KCNMB2Q9Y691 235 aa15.36■□□□□ 0.05
SMCO2-204ENST00000538647 NDUFB5O43674 189 aa15.35■□□□□ 0.05
SMCO2-204ENST00000538647 WFS1O76024 890 aa15.35■□□□□ 0.05
SMCO2-204ENST00000538647 MX2P20592 715 aa15.35■□□□□ 0.05
SMCO2-204ENST00000538647 TRIP4Q15650 581 aaPredicted RBP15.35■□□□□ 0.05
SMCO2-204ENST00000538647 SPEM2Q0P670 501 aa15.34■□□□□ 0.05
SMCO2-204ENST00000538647 FAM182BQ5T319 152 aa15.34■□□□□ 0.05
SMCO2-204ENST00000538647 SLC30A3Q99726 388 aa15.34■□□□□ 0.05
SMCO2-204ENST00000538647 BMP4P12644 408 aa15.33■□□□□ 0.04
SMCO2-204ENST00000538647 PCSK2P16519 638 aa15.33■□□□□ 0.04
SMCO2-204ENST00000538647 MBIPQ9NS73 344 aa15.33■□□□□ 0.04
SMCO2-204ENST00000538647 DCTN4Q9UJW0 460 aa15.33■□□□□ 0.04
SMCO2-204ENST00000538647 C2CD2LO14523 706 aa15.32■□□□□ 0.04
SMCO2-204ENST00000538647 XYLBO75191 536 aa15.32■□□□□ 0.04
SMCO2-204ENST00000538647 MAPK1P28482 360 aa15.32■□□□□ 0.04
SMCO2-204ENST00000538647 KRT76Q01546 638 aa15.32■□□□□ 0.04
SMCO2-204ENST00000538647 UBAP1LF5GYI3 381 aa15.31■□□□□ 0.04
SMCO2-204ENST00000538647 MARSP56192 900 aaKnown RBP15.31■□□□□ 0.04
SMCO2-204ENST00000538647 CCINQ13939 588 aa15.31■□□□□ 0.04
SMCO2-204ENST00000538647 TMCO4Q5TGY1 634 aa15.31■□□□□ 0.04
SMCO2-204ENST00000538647 RAB44Q7Z6P3 723 aaPredicted RBP15.31■□□□□ 0.04
SMCO2-204ENST00000538647 GSX2Q9BZM3 304 aa15.31■□□□□ 0.04
SMCO2-204ENST00000538647 GGNBP2Q9H3C7 697 aa15.31■□□□□ 0.04
SMCO2-204ENST00000538647 USP5P45974 858 aa15.3■□□□□ 0.04
SMCO2-204ENST00000538647 C8orf34Q49A92 452 aa15.3■□□□□ 0.04
SMCO2-204ENST00000538647 TREML4Q6UXN2 200 aa15.3■□□□□ 0.04
SMCO2-204ENST00000538647 C11orf16Q9NQ32 467 aa15.3■□□□□ 0.04
SMCO2-204ENST00000538647 FNDC3AQ9Y2H6 1198 aaKnown RBP15.3■□□□□ 0.04
SMCO2-204ENST00000538647 RPLP1P05386 114 aaKnown RBP15.29■□□□□ 0.04
SMCO2-204ENST00000538647 GMPRP36959 345 aa15.29■□□□□ 0.04
SMCO2-204ENST00000538647 CCDC27Q2M243 656 aa15.29■□□□□ 0.04
SMCO2-204ENST00000538647 GJD3Q8N144 294 aa15.29■□□□□ 0.04
SMCO2-204ENST00000538647 TTC16Q8NEE8 873 aa15.29■□□□□ 0.04
SMCO2-204ENST00000538647 CNTNAP3BQ96NU0 1288 aa15.29■□□□□ 0.04
SMCO2-204ENST00000538647 CNTNAP3Q9BZ76 1288 aa15.29■□□□□ 0.04
SMCO2-204ENST00000538647 PRR12Q9ULL5 1215 aa15.29■□□□□ 0.04
SMCO2-204ENST00000538647 A6NHS1 94 aa15.28■□□□□ 0.04
SMCO2-204ENST00000538647 EGFRP00533 1210 aa15.28■□□□□ 0.04
SMCO2-204ENST00000538647 KRT25Q7Z3Z0 450 aa15.28■□□□□ 0.04
SMCO2-204ENST00000538647 NSFL1CQ9UNZ2 370 aaKnown RBP15.28■□□□□ 0.04
SMCO2-204ENST00000538647 SASH3O75995 380 aa15.27■□□□□ 0.04
SMCO2-204ENST00000538647 PNMA5Q96PV4 448 aa15.27■□□□□ 0.04
SMCO2-204ENST00000538647 RBCK1Q9BYM8 510 aa15.27■□□□□ 0.04
SMCO2-204ENST00000538647 IGF1RP08069 1367 aa15.26■□□□□ 0.03
SMCO2-204ENST00000538647 TMC1Q8TDI8 760 aa15.26■□□□□ 0.03
SMCO2-204ENST00000538647 BHMTQ93088 406 aa15.26■□□□□ 0.03
SMCO2-204ENST00000538647 CITED4Q96RK1 184 aa15.26■□□□□ 0.03
SMCO2-204ENST00000538647 NFKB1P19838 968 aa15.25■□□□□ 0.03
SMCO2-204ENST00000538647 TARSP26639 723 aaKnown RBP15.25■□□□□ 0.03
SMCO2-204ENST00000538647 MAP2K3P46734 347 aa15.24■□□□□ 0.03
SMCO2-204ENST00000538647 ZNF438Q7Z4V0 828 aa15.24■□□□□ 0.03
SMCO2-204ENST00000538647 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.24■□□□□ 0.03
SMCO2-204ENST00000538647 SRSF11Q05519 484 aaKnown RBP15.23■□□□□ 0.03
SMCO2-204ENST00000538647 PDE3BQ13370 1112 aa15.23■□□□□ 0.03
SMCO2-204ENST00000538647 NEUROD1Q13562 356 aa15.23■□□□□ 0.03
SMCO2-204ENST00000538647 LCE2AQ5TA79 106 aaPredicted RBP15.23■□□□□ 0.03
SMCO2-204ENST00000538647 ZNF468Q5VIY5 522 aaPredicted RBP15.23■□□□□ 0.03
SMCO2-204ENST00000538647 TMC7Q7Z402 723 aa15.23■□□□□ 0.03
SMCO2-204ENST00000538647 SYT9Q86SS6 491 aa15.23■□□□□ 0.03
SMCO2-204ENST00000538647 NLRP13Q86W25 1043 aa15.23■□□□□ 0.03
SMCO2-204ENST00000538647 FAM129BQ96TA1 746 aa15.23■□□□□ 0.03
SMCO2-204ENST00000538647 ZFATQ9P243 1243 aa15.23■□□□□ 0.03
SMCO2-204ENST00000538647 RARAP10276 462 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms