RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 NYXQ9GZU5 481 aa18.63■□□□□ 0.57
SMARCA4-206ENST00000538456 RASSF10A6NK89 507 aa18.62■□□□□ 0.57
SMARCA4-206ENST00000538456 HTATSF1O43719 755 aaKnown RBP18.62■□□□□ 0.57
SMARCA4-206ENST00000538456 EIF6P56537 245 aaKnown RBP18.62■□□□□ 0.57
SMARCA4-206ENST00000538456 SLC51AQ86UW1 340 aa18.62■□□□□ 0.57
SMARCA4-206ENST00000538456 RPGRQ92834 1020 aaKnown RBP18.62■□□□□ 0.57
SMARCA4-206ENST00000538456 MAP3K15Q6ZN16 1313 aa18.61■□□□□ 0.57
SMARCA4-206ENST00000538456 TCERG1O14776 1098 aaKnown RBP18.61■□□□□ 0.57
SMARCA4-206ENST00000538456 GPTP24298 496 aa18.61■□□□□ 0.57
SMARCA4-206ENST00000538456 LMOD1P29536 600 aaPredicted RBP18.61■□□□□ 0.57
SMARCA4-206ENST00000538456 KIF6Q6ZMV9 814 aa18.61■□□□□ 0.57
SMARCA4-206ENST00000538456 RRP7AQ9Y3A4 280 aaKnown RBP18.61■□□□□ 0.57
SMARCA4-206ENST00000538456 WDR33Q9C0J8 1336 aaKnown RBP18.6■□□□□ 0.57
SMARCA4-206ENST00000538456 MYL6BP14649 208 aa18.6■□□□□ 0.57
SMARCA4-206ENST00000538456 TTLL7Q6ZT98 887 aa18.6■□□□□ 0.57
SMARCA4-206ENST00000538456 LARGE2Q8N3Y3 721 aa18.6■□□□□ 0.57
SMARCA4-206ENST00000538456 ZBTB3Q9H5J0 574 aa18.6■□□□□ 0.57
SMARCA4-206ENST00000538456 TRPM7Q96QT4 1865 aa18.59■□□□□ 0.57
SMARCA4-206ENST00000538456 UBN2Q6ZU65 1347 aa18.59■□□□□ 0.57
SMARCA4-206ENST00000538456 ERVV-1B6SEH8 477 aa18.59■□□□□ 0.57
SMARCA4-206ENST00000538456 HSPA8P11142 646 aaKnown RBP18.59■□□□□ 0.57
SMARCA4-206ENST00000538456 FMR1Q06787 632 aaKnown RBP eCLIP18.59■□□□□ 0.572e-8■■■■□ 20
SMARCA4-206ENST00000538456 GRM1Q13255 1194 aa18.59■□□□□ 0.57
SMARCA4-206ENST00000538456 CC2D2BQ6DHV5 1058 aa18.59■□□□□ 0.57
SMARCA4-206ENST00000538456 PAXIP1Q6ZW49 1069 aaPredicted RBP18.59■□□□□ 0.57
SMARCA4-206ENST00000538456 DDX21Q9NR30 783 aaKnown RBP eCLIP18.59■□□□□ 0.57
SMARCA4-206ENST00000538456 EPS15P42566 896 aa18.58■□□□□ 0.56
SMARCA4-206ENST00000538456 SCNN1DP51172 638 aa18.58■□□□□ 0.56
SMARCA4-206ENST00000538456 RIC1Q4ADV7 1423 aa18.57■□□□□ 0.56
SMARCA4-206ENST00000538456 THSD7BQ9C0I4 1608 aa18.57■□□□□ 0.56
SMARCA4-206ENST00000538456 PPEF1O14829 653 aaPredicted RBP18.57■□□□□ 0.56
SMARCA4-206ENST00000538456 HOXA10P31260 410 aaPredicted RBP18.57■□□□□ 0.56
SMARCA4-206ENST00000538456 MAP2K1Q02750 393 aaPredicted RBP18.57■□□□□ 0.56
SMARCA4-206ENST00000538456 SUSD4Q5VX71 490 aa18.57■□□□□ 0.56
SMARCA4-206ENST00000538456 THUMPD2Q9BTF0 503 aaKnown RBP18.57■□□□□ 0.56
SMARCA4-206ENST00000538456 IBTKQ9P2D0 1353 aaPredicted RBP18.56■□□□□ 0.56
SMARCA4-206ENST00000538456 NEFMP07197 916 aa18.56■□□□□ 0.56
SMARCA4-206ENST00000538456 C3orf67Q6ZVT6 689 aa18.56■□□□□ 0.56
SMARCA4-206ENST00000538456 PNISRQ8TF01 805 aaKnown RBP18.56■□□□□ 0.56
SMARCA4-206ENST00000538456 RBM17Q96I25 401 aaKnown RBP18.56■□□□□ 0.56
SMARCA4-206ENST00000538456 TRAF5O00463 557 aa18.55■□□□□ 0.56
SMARCA4-206ENST00000538456 EIF4A1P60842 406 aaKnown RBP18.55■□□□□ 0.56
SMARCA4-206ENST00000538456 NIM1KQ8IY84 436 aa18.55■□□□□ 0.56
SMARCA4-206ENST00000538456 ABHD8Q96I13 439 aa18.55■□□□□ 0.56
SMARCA4-206ENST00000538456 CAPNS2Q96L46 248 aa18.55■□□□□ 0.56
SMARCA4-206ENST00000538456 PPIP5K2O43314 1243 aa18.54■□□□□ 0.56
SMARCA4-206ENST00000538456 NTSR2O95665 410 aa18.54■□□□□ 0.56
SMARCA4-206ENST00000538456 CYP4F22Q6NT55 531 aa18.54■□□□□ 0.56
SMARCA4-206ENST00000538456 CRAMP1Q96RY5 1269 aa18.54■□□□□ 0.56
SMARCA4-206ENST00000538456 AOC3Q16853 763 aa18.53■□□□□ 0.56
SMARCA4-206ENST00000538456 GRIPAP1Q4V328 841 aa18.53■□□□□ 0.56
SMARCA4-206ENST00000538456 USP50Q70EL3 339 aaPredicted RBP18.53■□□□□ 0.56
SMARCA4-206ENST00000538456 ZNF34Q8IZ26 560 aa18.53■□□□□ 0.56
SMARCA4-206ENST00000538456 ECE1P42892 770 aa18.52■□□□□ 0.56
SMARCA4-206ENST00000538456 CST9Q5W186 159 aa18.52■□□□□ 0.56
SMARCA4-206ENST00000538456 BEGAINQ9BUH8 593 aa18.52■□□□□ 0.56
SMARCA4-206ENST00000538456 LAMB2P55268 1798 aa18.51■□□□□ 0.55
SMARCA4-206ENST00000538456 GIGYF2Q6Y7W6 1299 aaKnown RBP18.51■□□□□ 0.55
SMARCA4-206ENST00000538456 PPP1R42Q7Z4L9 355 aa18.51■□□□□ 0.55
SMARCA4-206ENST00000538456 GPR101Q96P66 508 aaPredicted RBP18.51■□□□□ 0.55
SMARCA4-206ENST00000538456 TMX4Q9H1E5 349 aaPredicted RBP18.51■□□□□ 0.55
SMARCA4-206ENST00000538456 NFE2L2Q16236 605 aa18.5■□□□□ 0.55
SMARCA4-206ENST00000538456 FAM161AQ3B820 660 aa18.5■□□□□ 0.55
SMARCA4-206ENST00000538456 NLRP3Q96P20 1036 aa18.5■□□□□ 0.55
SMARCA4-206ENST00000538456 GPRC5DQ9NZD1 345 aa18.5■□□□□ 0.55
SMARCA4-206ENST00000538456 TSKSQ9UJT2 592 aa18.5■□□□□ 0.55
SMARCA4-206ENST00000538456 ANKRD36CQ5JPF3 1778 aa18.5■□□□□ 0.55
SMARCA4-206ENST00000538456 PARP10Q53GL7 1025 aa18.49■□□□□ 0.55
SMARCA4-206ENST00000538456 PLEKHF1Q96S99 279 aa18.49■□□□□ 0.55
SMARCA4-206ENST00000538456 ADARB2Q9NS39 739 aaKnown RBP18.49■□□□□ 0.55
SMARCA4-206ENST00000538456 ATP6V0A2Q9Y487 856 aa18.49■□□□□ 0.55
SMARCA4-206ENST00000538456 TLL2Q9Y6L7 1015 aa18.49■□□□□ 0.55
SMARCA4-206ENST00000538456 ABCC4O15439 1325 aa18.49■□□□□ 0.55
SMARCA4-206ENST00000538456 AOC2O75106 756 aa18.48■□□□□ 0.55
SMARCA4-206ENST00000538456 UTP14AQ9BVJ6 771 aaKnown RBP18.48■□□□□ 0.55
SMARCA4-206ENST00000538456 ERBB4Q15303 1308 aa18.48■□□□□ 0.55
SMARCA4-206ENST00000538456 MAPK8IP3Q9UPT6 1336 aa18.48■□□□□ 0.55
SMARCA4-206ENST00000538456 CCDC85CA6NKD9 419 aa18.47■□□□□ 0.55
SMARCA4-206ENST00000538456 CELF2O95319 508 aaKnown RBP18.47■□□□□ 0.55
SMARCA4-206ENST00000538456 ANXA1P04083 346 aa18.47■□□□□ 0.55
SMARCA4-206ENST00000538456 EIF2S2P20042 333 aaKnown RBP18.47■□□□□ 0.55
SMARCA4-206ENST00000538456 GMPSP49915 693 aaPredicted RBP18.47■□□□□ 0.55
SMARCA4-206ENST00000538456 CXCL9Q07325 125 aa18.47■□□□□ 0.55
SMARCA4-206ENST00000538456 TSPYL4Q9UJ04 414 aa18.47■□□□□ 0.55
SMARCA4-206ENST00000538456 ZNRF3Q9ULT6 936 aa18.47■□□□□ 0.55
SMARCA4-206ENST00000538456 TAF1P21675 1872 aa18.47■□□□□ 0.55
SMARCA4-206ENST00000538456 PROSER3Q2NL68 480 aa18.46■□□□□ 0.55
SMARCA4-206ENST00000538456 DPP8Q6V1X1 898 aaPredicted RBP18.46■□□□□ 0.55
SMARCA4-206ENST00000538456 GLIS2Q9BZE0 524 aaPredicted RBP18.46■□□□□ 0.55
SMARCA4-206ENST00000538456 ZNF408Q9H9D4 720 aa18.46■□□□□ 0.55
SMARCA4-206ENST00000538456 PDIA6Q15084 440 aa18.45■□□□□ 0.54
SMARCA4-206ENST00000538456 LRP10Q7Z4F1 713 aa18.45■□□□□ 0.54
SMARCA4-206ENST00000538456 SAPCD2Q86UD0 394 aa18.45■□□□□ 0.54
SMARCA4-206ENST00000538456 SUPT20HQ8NEM7 779 aa18.45■□□□□ 0.54
SMARCA4-206ENST00000538456 RAD17O75943 681 aa18.44■□□□□ 0.54
SMARCA4-206ENST00000538456 HCLS1P14317 486 aaPredicted RBP18.44■□□□□ 0.54
SMARCA4-206ENST00000538456 SLC10A5Q5PT55 438 aa18.44■□□□□ 0.54
SMARCA4-206ENST00000538456 BCL2L13Q9BXK5 485 aa18.44■□□□□ 0.54
SMARCA4-206ENST00000538456 RTFDC1Q9BY42 306 aaPredicted RBP18.44■□□□□ 0.54
SMARCA4-206ENST00000538456 VPS33BQ9H267 617 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms