RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 NFKBIBQ15653 356 aa6.26□□□□□ -1.41
LRP6-203ENST00000538239 FERMT3Q86UX7 667 aa6.26□□□□□ -1.41
LRP6-203ENST00000538239 ZNHIT6Q9NWK9 470 aaKnown RBP6.26□□□□□ -1.41
LRP6-203ENST00000538239 CFAP45Q9UL16 551 aa6.26□□□□□ -1.41
LRP6-203ENST00000538239 KSR2Q6VAB6 950 aa6.26□□□□□ -1.41
LRP6-203ENST00000538239 ZGPATQ8N5A5 531 aaKnown RBP6.26□□□□□ -1.41
LRP6-203ENST00000538239 DNMT1P26358 1616 aaKnown RBP6.26□□□□□ -1.41
LRP6-203ENST00000538239 TCOF1Q13428 1488 aaKnown RBP6.26□□□□□ -1.41
LRP6-203ENST00000538239 MBD3O95983 291 aa6.26□□□□□ -1.41
LRP6-203ENST00000538239 MYO5CQ9NQX4 1742 aa6.26□□□□□ -1.41
LRP6-203ENST00000538239 CHD1O14646 1710 aa6.26□□□□□ -1.41
LRP6-203ENST00000538239 NASPP49321 788 aaPredicted RBP6.26□□□□□ -1.41
LRP6-203ENST00000538239 CWF19L2Q2TBE0 894 aaKnown RBP6.26□□□□□ -1.41
LRP6-203ENST00000538239 NAA16Q6N069 864 aaPredicted RBP6.26□□□□□ -1.41
LRP6-203ENST00000538239 CCDC24Q8N4L8 307 aa6.26□□□□□ -1.41
LRP6-203ENST00000538239 CNBD1Q8NA66 436 aa6.26□□□□□ -1.41
LRP6-203ENST00000538239 ZNF408Q9H9D4 720 aa6.26□□□□□ -1.41
LRP6-203ENST00000538239 SAMM50Q9Y512 469 aa6.26□□□□□ -1.41
LRP6-203ENST00000538239 PRIM1P49642 420 aaKnown RBP6.25□□□□□ -1.41
LRP6-203ENST00000538239 PPFIBP1Q86W92 1011 aa6.25□□□□□ -1.41
LRP6-203ENST00000538239 C8orf76Q96K31 380 aa6.25□□□□□ -1.41
LRP6-203ENST00000538239 MEIS3Q99687 375 aa6.25□□□□□ -1.41
LRP6-203ENST00000538239 PA2G4Q9UQ80 394 aaKnown RBP6.25□□□□□ -1.41
LRP6-203ENST00000538239 SHANK2Q9UPX8 1470 aa6.25□□□□□ -1.41
LRP6-203ENST00000538239 MAP3K19Q56UN5 1328 aa6.25□□□□□ -1.41
LRP6-203ENST00000538239 RDXP35241 583 aaKnown RBP6.25□□□□□ -1.41
LRP6-203ENST00000538239 CCDC194A0A1B0GVG4 234 aa6.25□□□□□ -1.41
LRP6-203ENST00000538239 HMGB1P09429 215 aaKnown RBP6.25□□□□□ -1.41
LRP6-203ENST00000538239 CA8P35219 290 aa6.25□□□□□ -1.41
LRP6-203ENST00000538239 KRT24Q2M2I5 525 aa6.25□□□□□ -1.41
LRP6-203ENST00000538239 CDCA7Q9BWT1 371 aaPredicted RBP6.25□□□□□ -1.41
LRP6-203ENST00000538239 STX8Q9UNK0 236 aa6.25□□□□□ -1.41
LRP6-203ENST00000538239 TMEM266Q2M3C6 531 aa6.25□□□□□ -1.41
LRP6-203ENST00000538239 NOM1Q5C9Z4 860 aaKnown RBP6.25□□□□□ -1.41
LRP6-203ENST00000538239 MSL1Q68DK7 614 aa6.25□□□□□ -1.41
LRP6-203ENST00000538239 CAMK4Q16566 473 aa6.25□□□□□ -1.41
LRP6-203ENST00000538239 MICU3Q86XE3 530 aa6.25□□□□□ -1.41
LRP6-203ENST00000538239 CCDC39Q9UFE4 941 aa6.25□□□□□ -1.41
LRP6-203ENST00000538239 IL16Q14005 1332 aa6.24□□□□□ -1.41
LRP6-203ENST00000538239 NEBLO76041 1014 aa6.24□□□□□ -1.41
LRP6-203ENST00000538239 BAG4O95429 457 aaKnown RBP6.24□□□□□ -1.41
LRP6-203ENST00000538239 CCDC192P0DO97 292 aa6.24□□□□□ -1.41
LRP6-203ENST00000538239 TRIM21P19474 475 aaKnown RBP6.24□□□□□ -1.41
LRP6-203ENST00000538239 MAGEB6P1A0A0J9YX57 407 aa6.24□□□□□ -1.41
LRP6-203ENST00000538239 KIF5BP33176 963 aa6.24□□□□□ -1.41
LRP6-203ENST00000538239 SSR1P43307 286 aaKnown RBP6.24□□□□□ -1.41
LRP6-203ENST00000538239 EYA3Q99504 573 aa6.24□□□□□ -1.41
LRP6-203ENST00000538239 YEATS2Q9ULM3 1422 aa6.24□□□□□ -1.41
LRP6-203ENST00000538239 COL17A1Q9UMD9 1497 aaPredicted RBP6.24□□□□□ -1.41
LRP6-203ENST00000538239 RHPN1Q8TCX5 695 aa6.24□□□□□ -1.41
LRP6-203ENST00000538239 MPHOSPH6Q99547 160 aaKnown RBP6.24□□□□□ -1.41
LRP6-203ENST00000538239 BAG6P46379 1132 aa6.24□□□□□ -1.41
LRP6-203ENST00000538239 MIGA1Q8NAN2 632 aa6.24□□□□□ -1.41
LRP6-203ENST00000538239 SLC26A6Q9BXS9 759 aa6.24□□□□□ -1.41
LRP6-203ENST00000538239 MRPL50Q8N5N7 158 aaKnown RBP6.24□□□□□ -1.41
LRP6-203ENST00000538239 NCOA7Q8NI08 942 aa6.24□□□□□ -1.41
LRP6-203ENST00000538239 ARHGEF10O15013 1369 aa6.24□□□□□ -1.41
LRP6-203ENST00000538239 UFL1O94874 794 aa6.23□□□□□ -1.41
LRP6-203ENST00000538239 METAP2P50579 478 aaKnown RBP eCLIP6.23□□□□□ -1.41
LRP6-203ENST00000538239 MPNDQ8N594 471 aa6.23□□□□□ -1.41
LRP6-203ENST00000538239 MAGEB6Q8N7X4 407 aa6.23□□□□□ -1.41
LRP6-203ENST00000538239 HCLS1P14317 486 aaPredicted RBP6.23□□□□□ -1.41
LRP6-203ENST00000538239 IFIT1BQ5T764 474 aaKnown RBP6.23□□□□□ -1.41
LRP6-203ENST00000538239 LTKP29376 864 aa6.23□□□□□ -1.41
LRP6-203ENST00000538239 NUP62CLQ9H1M0 184 aa6.23□□□□□ -1.41
LRP6-203ENST00000538239 USP16Q9Y5T5 823 aa6.23□□□□□ -1.41
LRP6-203ENST00000538239 SLC9C2Q5TAH2 1124 aa6.23□□□□□ -1.41
LRP6-203ENST00000538239 KLHL10Q6JEL2 608 aa6.23□□□□□ -1.41
LRP6-203ENST00000538239 PHACTR3Q96KR7 559 aa6.23□□□□□ -1.41
LRP6-203ENST00000538239 ANKRD2Q9GZV1 360 aa6.23□□□□□ -1.41
LRP6-203ENST00000538239 ZFYVE9O95405 1425 aa6.23□□□□□ -1.41
LRP6-203ENST00000538239 H0YIN7 160 aa6.23□□□□□ -1.41
LRP6-203ENST00000538239 IL15P40933 162 aaPredicted RBP6.23□□□□□ -1.41
LRP6-203ENST00000538239 TSG101Q99816 390 aa6.23□□□□□ -1.41
LRP6-203ENST00000538239 BACH2Q9BYV9 841 aa6.23□□□□□ -1.41
LRP6-203ENST00000538239 RAB34Q9BZG1 259 aa6.23□□□□□ -1.41
LRP6-203ENST00000538239 PHAXQ9H814 394 aaKnown RBP6.23□□□□□ -1.41
LRP6-203ENST00000538239 SAP30BPQ9UHR5 308 aaKnown RBP6.23□□□□□ -1.41
LRP6-203ENST00000538239 PPP1R12BO60237 982 aaPredicted RBP6.23□□□□□ -1.41
LRP6-203ENST00000538239 ALDH1L1O75891 902 aa6.23□□□□□ -1.41
LRP6-203ENST00000538239 EIF5P55010 431 aaKnown RBP6.23□□□□□ -1.41
LRP6-203ENST00000538239 TFCP2Q12800 502 aa6.23□□□□□ -1.41
LRP6-203ENST00000538239 CCDC12Q8WUD4 166 aaPredicted RBP6.23□□□□□ -1.41
LRP6-203ENST00000538239 CARD14Q9BXL6 1004 aa6.23□□□□□ -1.41
LRP6-203ENST00000538239 NEO1Q92859 1461 aa6.23□□□□□ -1.41
LRP6-203ENST00000538239 TMEM2Q9UHN6 1383 aa6.22□□□□□ -1.41
LRP6-203ENST00000538239 DESP17661 470 aa6.22□□□□□ -1.41
LRP6-203ENST00000538239 WTAPQ15007 396 aa6.22□□□□□ -1.41
LRP6-203ENST00000538239 TSPYL6Q8N831 410 aa6.22□□□□□ -1.41
LRP6-203ENST00000538239 FAM89AQ96GI7 184 aa6.22□□□□□ -1.41
LRP6-203ENST00000538239 BICC1Q9H694 974 aaKnown RBP6.22□□□□□ -1.41
LRP6-203ENST00000538239 QTRT2Q9H974 415 aaKnown RBP6.22□□□□□ -1.41
LRP6-203ENST00000538239 LDHBP07195 334 aaKnown RBP6.22□□□□□ -1.41
LRP6-203ENST00000538239 HEATR3Q7Z4Q2 680 aa6.22□□□□□ -1.41
LRP6-203ENST00000538239 CKAP2LQ8IYA6 745 aa6.22□□□□□ -1.41
LRP6-203ENST00000538239 MYO6Q9UM54 1294 aa6.22□□□□□ -1.41
LRP6-203ENST00000538239 FAM177A1Q8N128 213 aaPredicted RBP6.22□□□□□ -1.41
LRP6-203ENST00000538239 NEK1Q96PY6 1258 aa6.22□□□□□ -1.41
LRP6-203ENST00000538239 LRRC2Q9BYS8 371 aa6.22□□□□□ -1.41
LRP6-203ENST00000538239 IARSP41252 1262 aaKnown RBP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms