RNA–Protein interactions for RNA: ENST00000538045.5

MSRB3-207, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 4

Gene MSRB3, Length 527 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-207ENST00000538045 EXOSC9Q06265 439 aaKnown RBP17■□□□□ 0.31
MSRB3-207ENST00000538045 CCDC88AQ3V6T2 1871 aa17■□□□□ 0.31
MSRB3-207ENST00000538045 RIC3Q7Z5B4 369 aa17■□□□□ 0.31
MSRB3-207ENST00000538045 CACNA1FO60840 1977 aa17■□□□□ 0.31
MSRB3-207ENST00000538045 TNRC6CQ9HCJ0 1690 aaKnown RBP17■□□□□ 0.31
MSRB3-207ENST00000538045 C21orf2O43822 256 aa16.99■□□□□ 0.31
MSRB3-207ENST00000538045 ISCA1Q9BUE6 129 aa16.99■□□□□ 0.31
MSRB3-207ENST00000538045 STK31Q9BXU1 1019 aa16.99■□□□□ 0.31
MSRB3-207ENST00000538045 MYH16Q9H6N6 1097 aa16.99■□□□□ 0.31
MSRB3-207ENST00000538045 ZNF521Q96K83 1311 aa16.98■□□□□ 0.31
MSRB3-207ENST00000538045 ATP5J2-PTCD1G3V325 749 aa16.98■□□□□ 0.31
MSRB3-207ENST00000538045 VAMP4O75379 141 aa16.98■□□□□ 0.31
MSRB3-207ENST00000538045 SLC10A5Q5PT55 438 aa16.98■□□□□ 0.31
MSRB3-207ENST00000538045 C9orf131Q5VYM1 1079 aa16.98■□□□□ 0.31
MSRB3-207ENST00000538045 PRPF40BQ6NWY9 871 aaKnown RBP16.98■□□□□ 0.31
MSRB3-207ENST00000538045 MIER1Q8N108 512 aa16.98■□□□□ 0.31
MSRB3-207ENST00000538045 TRMT112Q9UI30 125 aaKnown RBP16.98■□□□□ 0.31
MSRB3-207ENST00000538045 ADCY9O60503 1353 aa16.98■□□□□ 0.31
MSRB3-207ENST00000538045 RIC1Q4ADV7 1423 aa16.97■□□□□ 0.31
MSRB3-207ENST00000538045 DDX58O95786 925 aaKnown RBP16.97■□□□□ 0.31
MSRB3-207ENST00000538045 SLC4A2P04920 1241 aa16.97■□□□□ 0.31
MSRB3-207ENST00000538045 ALDH1B1P30837 517 aa16.97■□□□□ 0.31
MSRB3-207ENST00000538045 RASSF7Q02833 373 aa16.97■□□□□ 0.31
MSRB3-207ENST00000538045 CRY2Q49AN0 593 aa16.97■□□□□ 0.31
MSRB3-207ENST00000538045 ZNF428Q96B54 188 aa16.97■□□□□ 0.31
MSRB3-207ENST00000538045 NLRP3Q96P20 1036 aa16.97■□□□□ 0.31
MSRB3-207ENST00000538045 FER1L6Q2WGJ9 1857 aa16.97■□□□□ 0.31
MSRB3-207ENST00000538045 RNF123Q5XPI4 1314 aa16.96■□□□□ 0.31
MSRB3-207ENST00000538045 SYNE4Q8N205 404 aa16.96■□□□□ 0.31
MSRB3-207ENST00000538045 RPGRQ92834 1020 aaKnown RBP16.96■□□□□ 0.31
MSRB3-207ENST00000538045 SH3TC1Q8TE82 1336 aa16.96■□□□□ 0.3
MSRB3-207ENST00000538045 TRIM28Q13263 835 aaKnown RBP16.95■□□□□ 0.3
MSRB3-207ENST00000538045 C3orf67Q6ZVT6 689 aa16.95■□□□□ 0.3
MSRB3-207ENST00000538045 G2E3Q7L622 706 aa16.95■□□□□ 0.3
MSRB3-207ENST00000538045 C7orf43Q8WVR3 580 aa16.95■□□□□ 0.3
MSRB3-207ENST00000538045 MYD88Q99836 296 aa16.95■□□□□ 0.3
MSRB3-207ENST00000538045 RNF181Q9P0P0 153 aa16.95■□□□□ 0.3
MSRB3-207ENST00000538045 LAMB2P55268 1798 aa16.94■□□□□ 0.3
MSRB3-207ENST00000538045 NFKBIEO00221 500 aa16.94■□□□□ 0.3
MSRB3-207ENST00000538045 HCLS1P14317 486 aaPredicted RBP16.94■□□□□ 0.3
MSRB3-207ENST00000538045 HOXA10P31260 410 aaPredicted RBP16.94■□□□□ 0.3
MSRB3-207ENST00000538045 SOGA3Q5TF21 947 aa16.94■□□□□ 0.3
MSRB3-207ENST00000538045 KSR2Q6VAB6 950 aa16.94■□□□□ 0.3
MSRB3-207ENST00000538045 ZNF526Q8TF50 670 aaPredicted RBP16.94■□□□□ 0.3
MSRB3-207ENST00000538045 RBM17Q96I25 401 aaKnown RBP16.94■□□□□ 0.3
MSRB3-207ENST00000538045 METTL22Q9BUU2 404 aaPredicted RBP16.94■□□□□ 0.3
MSRB3-207ENST00000538045 MAP3K2Q9Y2U5 619 aa16.94■□□□□ 0.3
MSRB3-207ENST00000538045 PI4KAP2A4QPH2 592 aa16.93■□□□□ 0.3
MSRB3-207ENST00000538045 LMNB1P20700 586 aa16.93■□□□□ 0.3
MSRB3-207ENST00000538045 PRELPP51888 382 aa16.93■□□□□ 0.3
MSRB3-207ENST00000538045 PI4KAP1Q8N8J0 262 aa16.93■□□□□ 0.3
MSRB3-207ENST00000538045 FAM89AQ96GI7 184 aa16.93■□□□□ 0.3
MSRB3-207ENST00000538045 CRAMP1Q96RY5 1269 aa16.92■□□□□ 0.3
MSRB3-207ENST00000538045 GPBP1L1Q9HC44 474 aaPredicted RBP16.92■□□□□ 0.3
MSRB3-207ENST00000538045 DDX60Q8IY21 1712 aaKnown RBP16.92■□□□□ 0.3
MSRB3-207ENST00000538045 DICER1Q9UPY3 1922 aaKnown RBP16.92■□□□□ 0.3
MSRB3-207ENST00000538045 E9PSI1 815 aa16.91■□□□□ 0.3
MSRB3-207ENST00000538045 FLIIQ13045 1269 aa16.91■□□□□ 0.3
MSRB3-207ENST00000538045 CCDC93Q567U6 631 aa16.91■□□□□ 0.3
MSRB3-207ENST00000538045 RTL5Q5HYW3 569 aaPredicted RBP16.91■□□□□ 0.3
MSRB3-207ENST00000538045 OLFM4Q6UX06 510 aa16.91■□□□□ 0.3
MSRB3-207ENST00000538045 CCDC191Q8NCU4 936 aa16.91■□□□□ 0.3
MSRB3-207ENST00000538045 TAOK3Q9H2K8 898 aa16.91■□□□□ 0.3
MSRB3-207ENST00000538045 SLFN5Q08AF3 891 aa16.9■□□□□ 0.3
MSRB3-207ENST00000538045 CWC25Q9NXE8 425 aaPredicted RBP16.9■□□□□ 0.3
MSRB3-207ENST00000538045 TAF1P21675 1872 aa16.9■□□□□ 0.3
MSRB3-207ENST00000538045 LTBP3Q9NS15 1303 aa16.9■□□□□ 0.3
MSRB3-207ENST00000538045 FKBP5Q13451 457 aaPredicted RBP16.89■□□□□ 0.29
MSRB3-207ENST00000538045 RTKN2Q8IZC4 609 aa16.89■□□□□ 0.29
MSRB3-207ENST00000538045 ZBTB38Q8NAP3 1195 aaPredicted RBP16.89■□□□□ 0.29
MSRB3-207ENST00000538045 CDCA7LQ96GN5 454 aa16.89■□□□□ 0.29
MSRB3-207ENST00000538045 IRS4O14654 1257 aaPredicted RBP16.88■□□□□ 0.29
MSRB3-207ENST00000538045 IGKV5-2P06315 115 aa16.88■□□□□ 0.29
MSRB3-207ENST00000538045 NEXNQ0ZGT2 675 aa16.88■□□□□ 0.29
MSRB3-207ENST00000538045 ABCC4O15439 1325 aa16.88■□□□□ 0.29
MSRB3-207ENST00000538045 PPEF1O14829 653 aaPredicted RBP16.87■□□□□ 0.29
MSRB3-207ENST00000538045 PCCAP05165 728 aaPredicted RBP16.87■□□□□ 0.29
MSRB3-207ENST00000538045 FKBP4Q02790 459 aaKnown RBP eCLIP16.87■□□□□ 0.29
MSRB3-207ENST00000538045 SF3B3Q15393 1217 aaKnown RBP16.87■□□□□ 0.29
MSRB3-207ENST00000538045 CC2D2BQ6DHV5 1058 aa16.87■□□□□ 0.29
MSRB3-207ENST00000538045 DDX46Q7L014 1031 aaKnown RBP16.87■□□□□ 0.29
MSRB3-207ENST00000538045 JARID2Q92833 1246 aaPredicted RBP16.87■□□□□ 0.29
MSRB3-207ENST00000538045 BBOX1O75936 387 aa16.86■□□□□ 0.29
MSRB3-207ENST00000538045 DNAAF4Q8WXU2 420 aa16.86■□□□□ 0.29
MSRB3-207ENST00000538045 TIAM2Q8IVF5 1701 aa16.86■□□□□ 0.29
MSRB3-207ENST00000538045 ZC3H4Q9UPT8 1303 aaKnown RBP16.86■□□□□ 0.29
MSRB3-207ENST00000538045 NEURL1BA8MQ27 555 aa16.85■□□□□ 0.29
MSRB3-207ENST00000538045 HSP90B1P14625 803 aaKnown RBP16.85■□□□□ 0.29
MSRB3-207ENST00000538045 GRAPQ13588 217 aa16.85■□□□□ 0.29
MSRB3-207ENST00000538045 CWF19L2Q2TBE0 894 aaKnown RBP16.85■□□□□ 0.29
MSRB3-207ENST00000538045 TRMT2AQ8IZ69 625 aaKnown RBP16.85■□□□□ 0.29
MSRB3-207ENST00000538045 GRAPLQ8TC17 118 aaPredicted RBP16.85■□□□□ 0.29
MSRB3-207ENST00000538045 GRIPAP1Q4V328 841 aa16.84■□□□□ 0.29
MSRB3-207ENST00000538045 SLC51AQ86UW1 340 aa16.84■□□□□ 0.29
MSRB3-207ENST00000538045 TMX4Q9H1E5 349 aaPredicted RBP16.84■□□□□ 0.29
MSRB3-207ENST00000538045 ZNF277Q9NRM2 450 aaPredicted RBP16.84■□□□□ 0.29
MSRB3-207ENST00000538045 ATP6V0A2Q9Y487 856 aa16.84■□□□□ 0.29
MSRB3-207ENST00000538045 SNED1Q8TER0 1413 aa16.84■□□□□ 0.29
MSRB3-207ENST00000538045 F6X3S4 739 aa16.83■□□□□ 0.28
MSRB3-207ENST00000538045 PDE8AO60658 829 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms