RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 ANKRD13DQ6ZTN6 518 aa10.89□□□□□ -0.67
SPARC-208ENST00000538026 PLBD2Q8NHP8 589 aa10.89□□□□□ -0.67
SPARC-208ENST00000538026 ZNF622Q969S3 477 aaKnown RBP eCLIP10.89□□□□□ -0.67
SPARC-208ENST00000538026 HYPKQ9NX55 129 aa10.89□□□□□ -0.67
SPARC-208ENST00000538026 LAMB2P55268 1798 aa10.89□□□□□ -0.67
SPARC-208ENST00000538026 IBTKQ9P2D0 1353 aaPredicted RBP10.89□□□□□ -0.67
SPARC-208ENST00000538026 CACNA1FO60840 1977 aa10.88□□□□□ -0.67
SPARC-208ENST00000538026 ATP5J2-PTCD1G3V325 749 aa10.88□□□□□ -0.67
SPARC-208ENST00000538026 RASSF7Q02833 373 aa10.88□□□□□ -0.67
SPARC-208ENST00000538026 TWISTNBQ3B726 338 aaPredicted RBP10.88□□□□□ -0.67
SPARC-208ENST00000538026 STYK1Q6J9G0 422 aa10.88□□□□□ -0.67
SPARC-208ENST00000538026 MASTLQ96GX5 879 aa10.88□□□□□ -0.67
SPARC-208ENST00000538026 DDX60Q8IY21 1712 aaKnown RBP10.87□□□□□ -0.67
SPARC-208ENST00000538026 RIC1Q4ADV7 1423 aa10.87□□□□□ -0.67
SPARC-208ENST00000538026 SNED1Q8TER0 1413 aa10.87□□□□□ -0.67
SPARC-208ENST00000538026 C21orf2O43822 256 aa10.87□□□□□ -0.67
SPARC-208ENST00000538026 TRIM28Q13263 835 aaKnown RBP10.87□□□□□ -0.67
SPARC-208ENST00000538026 DIEXFQ68CQ4 756 aaKnown RBP10.87□□□□□ -0.67
SPARC-208ENST00000538026 PRPF40BQ6NWY9 871 aaKnown RBP10.87□□□□□ -0.67
SPARC-208ENST00000538026 CDCA7LQ96GN5 454 aa10.87□□□□□ -0.67
SPARC-208ENST00000538026 ZNF219Q9P2Y4 722 aaPredicted RBP10.87□□□□□ -0.67
SPARC-208ENST00000538026 COL4A1P02462 1669 aa10.87□□□□□ -0.67
SPARC-208ENST00000538026 HCLS1P14317 486 aaPredicted RBP10.86□□□□□ -0.67
SPARC-208ENST00000538026 NPR1P16066 1061 aa10.86□□□□□ -0.67
SPARC-208ENST00000538026 HOXA10P31260 410 aaPredicted RBP10.86□□□□□ -0.67
SPARC-208ENST00000538026 PARP10Q53GL7 1025 aa10.86□□□□□ -0.67
SPARC-208ENST00000538026 CCDC30Q5VVM6 783 aa10.86□□□□□ -0.67
SPARC-208ENST00000538026 C9orf131Q5VYM1 1079 aa10.86□□□□□ -0.67
SPARC-208ENST00000538026 UTP14AQ9BVJ6 771 aaKnown RBP10.86□□□□□ -0.67
SPARC-208ENST00000538026 NYXQ9GZU5 481 aa10.86□□□□□ -0.67
SPARC-208ENST00000538026 PDZRN3Q9UPQ7 1066 aa10.86□□□□□ -0.67
SPARC-208ENST00000538026 SLC4A2P04920 1241 aa10.85□□□□□ -0.67
SPARC-208ENST00000538026 IGKV5-2P06315 115 aa10.85□□□□□ -0.67
SPARC-208ENST00000538026 GOLGA2Q08379 1002 aa10.85□□□□□ -0.67
SPARC-208ENST00000538026 HSP90AB3PQ58FF7 597 aa10.85□□□□□ -0.67
SPARC-208ENST00000538026 TRMT2AQ8IZ69 625 aaKnown RBP10.85□□□□□ -0.67
SPARC-208ENST00000538026 DICER1Q9UPY3 1922 aaKnown RBP10.85□□□□□ -0.67
SPARC-208ENST00000538026 PI4KAP2A4QPH2 592 aa10.84□□□□□ -0.67
SPARC-208ENST00000538026 NPHP1O15259 732 aa10.84□□□□□ -0.67
SPARC-208ENST00000538026 SLFN5Q08AF3 891 aa10.84□□□□□ -0.67
SPARC-208ENST00000538026 PPP1R42Q7Z4L9 355 aa10.84□□□□□ -0.67
SPARC-208ENST00000538026 PI4KAP1Q8N8J0 262 aa10.84□□□□□ -0.67
SPARC-208ENST00000538026 JARID2Q92833 1246 aaPredicted RBP10.84□□□□□ -0.67
SPARC-208ENST00000538026 CNKSR1Q969H4 720 aa10.84□□□□□ -0.67
SPARC-208ENST00000538026 FAM89AQ96GI7 184 aa10.84□□□□□ -0.67
SPARC-208ENST00000538026 TRMT112Q9UI30 125 aaKnown RBP10.84□□□□□ -0.67
SPARC-208ENST00000538026 GTF2E1P29083 439 aaPredicted RBP10.83□□□□□ -0.68
SPARC-208ENST00000538026 RTL5Q5HYW3 569 aaPredicted RBP10.83□□□□□ -0.68
SPARC-208ENST00000538026 KSR2Q6VAB6 950 aa10.83□□□□□ -0.68
SPARC-208ENST00000538026 RIC3Q7Z5B4 369 aa10.83□□□□□ -0.68
SPARC-208ENST00000538026 MYD88Q99836 296 aa10.83□□□□□ -0.68
SPARC-208ENST00000538026 METTL22Q9BUU2 404 aaPredicted RBP10.83□□□□□ -0.68
SPARC-208ENST00000538026 MAP3K2Q9Y2U5 619 aa10.83□□□□□ -0.68
SPARC-208ENST00000538026 SH3TC1Q8TE82 1336 aa10.83□□□□□ -0.68
SPARC-208ENST00000538026 ZNF526Q8TF50 670 aaPredicted RBP10.82□□□□□ -0.68
SPARC-208ENST00000538026 CRAMP1Q96RY5 1269 aa10.82□□□□□ -0.68
SPARC-208ENST00000538026 RNF181Q9P0P0 153 aa10.82□□□□□ -0.68
SPARC-208ENST00000538026 COL4A5P29400 1685 aa10.82□□□□□ -0.68
SPARC-208ENST00000538026 LMNB1P20700 586 aa10.81□□□□□ -0.68
SPARC-208ENST00000538026 FLIIQ13045 1269 aa10.81□□□□□ -0.68
SPARC-208ENST00000538026 CWF19L2Q2TBE0 894 aaKnown RBP10.81□□□□□ -0.68
SPARC-208ENST00000538026 NLRP3Q96P20 1036 aa10.81□□□□□ -0.68
SPARC-208ENST00000538026 MYH16Q9H6N6 1097 aa10.81□□□□□ -0.68
SPARC-208ENST00000538026 ABCC4O15439 1325 aa10.81□□□□□ -0.68
SPARC-208ENST00000538026 RNF123Q5XPI4 1314 aa10.81□□□□□ -0.68
SPARC-208ENST00000538026 LTBP3Q9NS15 1303 aa10.81□□□□□ -0.68
SPARC-208ENST00000538026 KIF3CO14782 793 aa10.8□□□□□ -0.68
SPARC-208ENST00000538026 ALDH1B1P30837 517 aa10.8□□□□□ -0.68
SPARC-208ENST00000538026 CASP7P55210 303 aa10.8□□□□□ -0.68
SPARC-208ENST00000538026 SF3B3Q15393 1217 aaKnown RBP10.8□□□□□ -0.68
SPARC-208ENST00000538026 ZBTB38Q8NAP3 1195 aaPredicted RBP10.8□□□□□ -0.68
SPARC-208ENST00000538026 CCDC191Q8NCU4 936 aa10.8□□□□□ -0.68
SPARC-208ENST00000538026 TIAM2Q8IVF5 1701 aa10.79□□□□□ -0.68
SPARC-208ENST00000538026 NEURL1BA8MQ27 555 aa10.79□□□□□ -0.68
SPARC-208ENST00000538026 POTECB2RU33 542 aa10.79□□□□□ -0.68
SPARC-208ENST00000538026 E9PSI1 815 aa10.79□□□□□ -0.68
SPARC-208ENST00000538026 F6X3S4 739 aa10.79□□□□□ -0.68
SPARC-208ENST00000538026 IRS4O14654 1257 aaPredicted RBP10.79□□□□□ -0.68
SPARC-208ENST00000538026 PCCAP05165 728 aaPredicted RBP10.79□□□□□ -0.68
SPARC-208ENST00000538026 MRPL50Q8N5N7 158 aaKnown RBP10.79□□□□□ -0.68
SPARC-208ENST00000538026 RPGRQ92834 1020 aaKnown RBP10.79□□□□□ -0.68
SPARC-208ENST00000538026 CELF1Q92879 486 aaKnown RBP10.79□□□□□ -0.68
SPARC-208ENST00000538026 RBM17Q96I25 401 aaKnown RBP10.79□□□□□ -0.68
SPARC-208ENST00000538026 STK31Q9BXU1 1019 aa10.79□□□□□ -0.68
SPARC-208ENST00000538026 NMRK2Q9NPI5 230 aa10.79□□□□□ -0.68
SPARC-208ENST00000538026 ZNF277Q9NRM2 450 aaPredicted RBP10.79□□□□□ -0.68
SPARC-208ENST00000538026 CWC25Q9NXE8 425 aaPredicted RBP10.79□□□□□ -0.68
SPARC-208ENST00000538026 H7C1W4 665 aa10.78□□□□□ -0.68
SPARC-208ENST00000538026 DDX58O95786 925 aaKnown RBP10.78□□□□□ -0.68
SPARC-208ENST00000538026 CCDC93Q567U6 631 aa10.78□□□□□ -0.68
SPARC-208ENST00000538026 SSH1Q8WYL5 1049 aa10.78□□□□□ -0.68
SPARC-208ENST00000538026 TAOK3Q9H2K8 898 aa10.78□□□□□ -0.68
SPARC-208ENST00000538026 SEC31BQ9NQW1 1179 aa10.78□□□□□ -0.68
SPARC-208ENST00000538026 PPEF1O14829 653 aaPredicted RBP10.77□□□□□ -0.69
SPARC-208ENST00000538026 FKBP4Q02790 459 aaKnown RBP eCLIP10.77□□□□□ -0.69
SPARC-208ENST00000538026 GCKRQ14397 625 aa10.77□□□□□ -0.69
SPARC-208ENST00000538026 BEND3Q5T5X7 828 aa10.77□□□□□ -0.69
SPARC-208ENST00000538026 DNAAF4Q8WXU2 420 aa10.77□□□□□ -0.69
SPARC-208ENST00000538026 CHMP4AQ9BY43 222 aa10.77□□□□□ -0.69
SPARC-208ENST00000538026 GPBP1L1Q9HC44 474 aaPredicted RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms