RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 MCM2P49736 904 aa12.55□□□□□ -0.4
RTN3-208ENST00000537981 SNW1Q13573 536 aaKnown RBP12.55□□□□□ -0.4
RTN3-208ENST00000537981 RUFY3Q7L099 469 aa12.55□□□□□ -0.4
RTN3-208ENST00000537981 DDX54Q8TDD1 881 aaKnown RBP12.55□□□□□ -0.4
RTN3-208ENST00000537981 MTMR6Q9Y217 621 aa12.55□□□□□ -0.4
RTN3-208ENST00000537981 SPHKAPQ2M3C7 1700 aa12.55□□□□□ -0.4
RTN3-208ENST00000537981 CCDC189A1A4V9 331 aa12.54□□□□□ -0.4
RTN3-208ENST00000537981 IRF6O14896 467 aa12.54□□□□□ -0.4
RTN3-208ENST00000537981 ACTN2P35609 894 aa12.54□□□□□ -0.4
RTN3-208ENST00000537981 PPP1R13BQ96KQ4 1090 aa12.54□□□□□ -0.4
RTN3-208ENST00000537981 TNMDQ9H2S6 317 aa12.54□□□□□ -0.4
RTN3-208ENST00000537981 DONSONQ9NYP3 566 aa12.54□□□□□ -0.4
RTN3-208ENST00000537981 N4BP1O75113 896 aaKnown RBP12.54□□□□□ -0.4
RTN3-208ENST00000537981 PDE1AP54750 535 aa12.54□□□□□ -0.4
RTN3-208ENST00000537981 AK2P54819 239 aa12.54□□□□□ -0.4
RTN3-208ENST00000537981 UNCXA6NJT0 531 aa12.53□□□□□ -0.4
RTN3-208ENST00000537981 UNC13BO14795 1591 aa12.53□□□□□ -0.4
RTN3-208ENST00000537981 NR1I2O75469 434 aa12.53□□□□□ -0.4
RTN3-208ENST00000537981 GSCP56915 257 aaPredicted RBP12.53□□□□□ -0.4
RTN3-208ENST00000537981 SETQ01105 290 aaPredicted RBP12.53□□□□□ -0.4
RTN3-208ENST00000537981 COL9A3Q14050 684 aaPredicted RBP12.53□□□□□ -0.4
RTN3-208ENST00000537981 CC2D1AQ6P1N0 951 aaPredicted RBP12.53□□□□□ -0.4
RTN3-208ENST00000537981 CEP85Q6P2H3 762 aa12.53□□□□□ -0.4
RTN3-208ENST00000537981 BARGINQ6ZT62 677 aa12.53□□□□□ -0.4
RTN3-208ENST00000537981 CCDC83Q8IWF9 413 aa12.53□□□□□ -0.4
RTN3-208ENST00000537981 ERCC4Q92889 916 aaPredicted RBP12.53□□□□□ -0.4
RTN3-208ENST00000537981 RILPL2Q969X0 211 aa12.53□□□□□ -0.4
RTN3-208ENST00000537981 CWC15Q9P013 229 aaKnown RBP12.53□□□□□ -0.4
RTN3-208ENST00000537981 ZFYVE16Q7Z3T8 1539 aa12.53□□□□□ -0.4
RTN3-208ENST00000537981 GJB2P29033 226 aa12.53□□□□□ -0.4
RTN3-208ENST00000537981 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.53□□□□□ -0.4
RTN3-208ENST00000537981 CARD6Q9BX69 1037 aa12.53□□□□□ -0.4
RTN3-208ENST00000537981 TFIP11Q9UBB9 837 aaKnown RBP12.53□□□□□ -0.4
RTN3-208ENST00000537981 TUBGCP6Q96RT7 1819 aa12.52□□□□□ -0.4
RTN3-208ENST00000537981 ST3GAL1Q11201 340 aa12.52□□□□□ -0.4
RTN3-208ENST00000537981 FAM43BQ6ZT52 329 aaPredicted RBP12.52□□□□□ -0.4
RTN3-208ENST00000537981 RASEFQ8IZ41 740 aa12.52□□□□□ -0.4
RTN3-208ENST00000537981 GOLGA6L1Q8N7Z2 621 aa12.52□□□□□ -0.4
RTN3-208ENST00000537981 KAT2BQ92831 832 aa12.52□□□□□ -0.4
RTN3-208ENST00000537981 PRAM1Q96QH2 718 aa12.52□□□□□ -0.4
RTN3-208ENST00000537981 DEF6Q9H4E7 631 aa12.52□□□□□ -0.4
RTN3-208ENST00000537981 GPS2Q13227 327 aa12.52□□□□□ -0.41
RTN3-208ENST00000537981 RNF217Q8TC41 542 aa12.52□□□□□ -0.41
RTN3-208ENST00000537981 UBXN4Q92575 508 aa12.52□□□□□ -0.41
RTN3-208ENST00000537981 ZSCAN16Q9H4T2 348 aaPredicted RBP12.52□□□□□ -0.41
RTN3-208ENST00000537981 TADA3O75528 432 aa12.51□□□□□ -0.41
RTN3-208ENST00000537981 MAP4K4O95819 1239 aaPredicted RBP12.51□□□□□ -0.41
RTN3-208ENST00000537981 FBLN1P23142 703 aa12.51□□□□□ -0.41
RTN3-208ENST00000537981 IQCB1Q15051 598 aa12.51□□□□□ -0.41
RTN3-208ENST00000537981 ISM2Q6H9L7 571 aa12.51□□□□□ -0.41
RTN3-208ENST00000537981 GGT6Q6P531 493 aa12.51□□□□□ -0.41
RTN3-208ENST00000537981 ANKRD44Q8N8A2 993 aa12.51□□□□□ -0.41
RTN3-208ENST00000537981 C8orf58Q8NAV2 365 aa12.51□□□□□ -0.41
RTN3-208ENST00000537981 DNAI1Q9UI46 699 aa12.51□□□□□ -0.41
RTN3-208ENST00000537981 IQGAP3Q86VI3 1631 aa12.51□□□□□ -0.41
RTN3-208ENST00000537981 CHMLP26374 656 aa12.51□□□□□ -0.41
RTN3-208ENST00000537981 CDC37L1Q7L3B6 337 aa12.51□□□□□ -0.41
RTN3-208ENST00000537981 SGSM3Q96HU1 749 aa12.51□□□□□ -0.41
RTN3-208ENST00000537981 MEIS3Q99687 375 aa12.51□□□□□ -0.41
RTN3-208ENST00000537981 FUT8Q9BYC5 575 aa12.51□□□□□ -0.41
RTN3-208ENST00000537981 VPS18Q9P253 973 aa12.51□□□□□ -0.41
RTN3-208ENST00000537981 SMC3Q9UQE7 1217 aa12.51□□□□□ -0.41
RTN3-208ENST00000537981 ZMYND10O75800 440 aa12.5□□□□□ -0.41
RTN3-208ENST00000537981 SCP2P22307 547 aa12.5□□□□□ -0.41
RTN3-208ENST00000537981 PTPN21Q16825 1174 aa12.5□□□□□ -0.41
RTN3-208ENST00000537981 RNF20Q5VTR2 975 aa12.5□□□□□ -0.41
RTN3-208ENST00000537981 NBPF11Q86T75 865 aa12.5□□□□□ -0.41
RTN3-208ENST00000537981 NECAB1Q8N987 351 aa12.5□□□□□ -0.41
RTN3-208ENST00000537981 KDM4CQ9H3R0 1056 aa12.5□□□□□ -0.41
RTN3-208ENST00000537981 SUGCTQ9HAC7 445 aa12.5□□□□□ -0.41
RTN3-208ENST00000537981 ADGRF5Q8IZF2 1346 aa12.5□□□□□ -0.41
RTN3-208ENST00000537981 WWC2Q6AWC2 1192 aa12.5□□□□□ -0.41
RTN3-208ENST00000537981 MCTP2Q6DN12 878 aa12.5□□□□□ -0.41
RTN3-208ENST00000537981 IQUBQ8NA54 791 aa12.5□□□□□ -0.41
RTN3-208ENST00000537981 HECW2Q9P2P5 1572 aa12.5□□□□□ -0.41
RTN3-208ENST00000537981 SIGLEC1Q9BZZ2 1709 aa12.5□□□□□ -0.41
RTN3-208ENST00000537981 EVCP57679 992 aa12.49□□□□□ -0.41
RTN3-208ENST00000537981 EXOC4Q96A65 974 aa12.49□□□□□ -0.41
RTN3-208ENST00000537981 TTC14Q96N46 770 aa12.49□□□□□ -0.41
RTN3-208ENST00000537981 MLH3Q9UHC1 1453 aa12.49□□□□□ -0.41
RTN3-208ENST00000537981 KIDINS220Q9ULH0 1771 aa12.49□□□□□ -0.41
RTN3-208ENST00000537981 MSH6P52701 1360 aa12.49□□□□□ -0.41
RTN3-208ENST00000537981 IL16Q14005 1332 aa12.49□□□□□ -0.41
RTN3-208ENST00000537981 CORO7P57737 925 aa12.49□□□□□ -0.41
RTN3-208ENST00000537981 SATB1Q01826 763 aa12.49□□□□□ -0.41
RTN3-208ENST00000537981 ARMCX5Q6P1M9 558 aa12.49□□□□□ -0.41
RTN3-208ENST00000537981 AK7Q96M32 723 aa12.49□□□□□ -0.41
RTN3-208ENST00000537981 SRRTQ9BXP5 876 aaKnown RBP12.49□□□□□ -0.41
RTN3-208ENST00000537981 GGNBP2Q9H3C7 697 aa12.49□□□□□ -0.41
RTN3-208ENST00000537981 PDE11AQ9HCR9 933 aa12.49□□□□□ -0.41
RTN3-208ENST00000537981 ABCA6Q8N139 1617 aa12.48□□□□□ -0.41
RTN3-208ENST00000537981 ATP7AQ04656 1500 aa12.48□□□□□ -0.41
RTN3-208ENST00000537981 DUOX2Q9NRD8 1548 aa12.48□□□□□ -0.41
RTN3-208ENST00000537981 URI1O94763 535 aaPredicted RBP12.48□□□□□ -0.41
RTN3-208ENST00000537981 TDO2P48775 406 aa12.48□□□□□ -0.41
RTN3-208ENST00000537981 CCDC91Q7Z6B0 441 aa12.48□□□□□ -0.41
RTN3-208ENST00000537981 PHACTR3Q96KR7 559 aa12.48□□□□□ -0.41
RTN3-208ENST00000537981 STAG3Q9UJ98 1225 aa12.48□□□□□ -0.41
RTN3-208ENST00000537981 TRAK1Q9UPV9 953 aa12.48□□□□□ -0.41
RTN3-208ENST00000537981 AKAP2Q9Y2D5 859 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms