RNA–Protein interactions for RNA: ENST00000537686.5

GGA3-201, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGA3, Length 4,069 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-201ENST00000537686 ARGLU1Q9NWB6 273 aaPredicted RBP11.8□□□□□ -0.52
GGA3-201ENST00000537686 RANBP6O60518 1105 aaKnown RBP11.8□□□□□ -0.52
GGA3-201ENST00000537686 HOXC9P31274 260 aa11.8□□□□□ -0.52
GGA3-201ENST00000537686 MAP3K11Q16584 847 aa11.8□□□□□ -0.52
GGA3-201ENST00000537686 WASF1Q92558 559 aa11.8□□□□□ -0.52
GGA3-201ENST00000537686 C8orf76Q96K31 380 aa11.8□□□□□ -0.52
GGA3-201ENST00000537686 SCAND2PQ9GZW5 306 aaPredicted RBP11.8□□□□□ -0.52
GGA3-201ENST00000537686 GDPD2Q9HCC8 539 aa11.8□□□□□ -0.52
GGA3-201ENST00000537686 PDE1AP54750 535 aa11.8□□□□□ -0.52
GGA3-201ENST00000537686 CCT2P78371 535 aaKnown RBP11.8□□□□□ -0.52
GGA3-201ENST00000537686 STIM1Q13586 685 aa11.8□□□□□ -0.52
GGA3-201ENST00000537686 AKAP4Q5JQC9 854 aa11.8□□□□□ -0.52
GGA3-201ENST00000537686 DDX46Q7L014 1031 aaKnown RBP11.8□□□□□ -0.52
GGA3-201ENST00000537686 SMARCE1Q969G3 411 aa11.8□□□□□ -0.52
GGA3-201ENST00000537686 LAMC1P11047 1609 aa11.79□□□□□ -0.52
GGA3-201ENST00000537686 GRM8O00222 908 aa11.79□□□□□ -0.52
GGA3-201ENST00000537686 POLR3DP05423 398 aaPredicted RBP11.79□□□□□ -0.52
GGA3-201ENST00000537686 HAND2P61296 217 aa11.79□□□□□ -0.52
GGA3-201ENST00000537686 TNPO1Q92973 898 aaKnown RBP11.79□□□□□ -0.52
GGA3-201ENST00000537686 HMGB1P09429 215 aaKnown RBP11.79□□□□□ -0.52
GGA3-201ENST00000537686 CAMK4Q16566 473 aa11.79□□□□□ -0.52
GGA3-201ENST00000537686 ZFYVE27Q5T4F4 411 aa11.79□□□□□ -0.52
GGA3-201ENST00000537686 LMBR1LQ6UX01 489 aa11.79□□□□□ -0.52
GGA3-201ENST00000537686 MROH2AA6NES4 1674 aa11.79□□□□□ -0.52
GGA3-201ENST00000537686 IQCA1Q86XH1 822 aa11.79□□□□□ -0.52
GGA3-201ENST00000537686 CCDC196A0A1B0GTZ2 297 aa11.78□□□□□ -0.52
GGA3-201ENST00000537686 PPFIA3O75145 1194 aa11.78□□□□□ -0.52
GGA3-201ENST00000537686 KSR2Q6VAB6 950 aa11.78□□□□□ -0.52
GGA3-201ENST00000537686 NFATC2IPQ8NCF5 419 aa11.78□□□□□ -0.52
GGA3-201ENST00000537686 TFIP11Q9UBB9 837 aaKnown RBP11.78□□□□□ -0.52
GGA3-201ENST00000537686 TRIM35Q9UPQ4 493 aa11.78□□□□□ -0.52
GGA3-201ENST00000537686 ESPNB1AK53 854 aa11.78□□□□□ -0.52
GGA3-201ENST00000537686 IFIT3O14879 490 aaKnown RBP11.78□□□□□ -0.52
GGA3-201ENST00000537686 HMGN5P82970 282 aaKnown RBP11.78□□□□□ -0.52
GGA3-201ENST00000537686 C16orf71Q8IYS4 520 aaPredicted RBP11.78□□□□□ -0.52
GGA3-201ENST00000537686 CTCFLQ8NI51 663 aaPredicted RBP11.78□□□□□ -0.52
GGA3-201ENST00000537686 TMOD2Q9NZR1 351 aa11.78□□□□□ -0.52
GGA3-201ENST00000537686 PTPRMP28827 1452 aa11.78□□□□□ -0.52
GGA3-201ENST00000537686 ATP7BP35670 1465 aa11.78□□□□□ -0.52
GGA3-201ENST00000537686 GOLGA8BA8MQT2 603 aa11.78□□□□□ -0.52
GGA3-201ENST00000537686 PPFIBP1Q86W92 1011 aa11.78□□□□□ -0.52
GGA3-201ENST00000537686 LINS1Q8NG48 757 aa11.78□□□□□ -0.52
GGA3-201ENST00000537686 CDC5LQ99459 802 aaKnown RBP11.78□□□□□ -0.52
GGA3-201ENST00000537686 DACH1Q9UI36 760 aa11.78□□□□□ -0.52
GGA3-201ENST00000537686 TULP4Q9NRJ4 1543 aa11.78□□□□□ -0.52
GGA3-201ENST00000537686 ADGRB1O14514 1584 aa11.78□□□□□ -0.52
GGA3-201ENST00000537686 ODF2Q5BJF6 829 aa11.77□□□□□ -0.52
GGA3-201ENST00000537686 TCEANC2Q96MN5 208 aa11.77□□□□□ -0.52
GGA3-201ENST00000537686 C6orf229H3BNL8 230 aa11.77□□□□□ -0.53
GGA3-201ENST00000537686 ALDH1L1O75891 902 aa11.77□□□□□ -0.53
GGA3-201ENST00000537686 CAGE1Q8TC20 777 aa11.77□□□□□ -0.53
GGA3-201ENST00000537686 ZNHIT6Q9NWK9 470 aaKnown RBP11.77□□□□□ -0.53
GGA3-201ENST00000537686 VSIG10Q8N0Z9 540 aa11.77□□□□□ -0.53
GGA3-201ENST00000537686 ZNF287Q9HBT7 754 aa11.77□□□□□ -0.53
GGA3-201ENST00000537686 SPATA31D1Q6ZQQ2 1576 aa11.77□□□□□ -0.53
GGA3-201ENST00000537686 TMEM94Q12767 1356 aa11.76□□□□□ -0.53
GGA3-201ENST00000537686 ATP8B2P98198 1209 aa11.76□□□□□ -0.53
GGA3-201ENST00000537686 ZNF771Q7L3S4 317 aaPredicted RBP11.76□□□□□ -0.53
GGA3-201ENST00000537686 IP6K1Q92551 441 aa11.76□□□□□ -0.53
GGA3-201ENST00000537686 QRICH2Q9H0J4 1663 aa11.76□□□□□ -0.53
GGA3-201ENST00000537686 FAM177A1Q8N128 213 aaPredicted RBP11.76□□□□□ -0.53
GGA3-201ENST00000537686 BMP2KQ9NSY1 1161 aaPredicted RBP11.76□□□□□ -0.53
GGA3-201ENST00000537686 PA2G4Q9UQ80 394 aaKnown RBP11.76□□□□□ -0.53
GGA3-201ENST00000537686 HSP90B2PQ58FF3 399 aa11.76□□□□□ -0.53
GGA3-201ENST00000537686 RUFY1Q96T51 708 aa11.76□□□□□ -0.53
GGA3-201ENST00000537686 SLC12A7Q9Y666 1083 aa11.76□□□□□ -0.53
GGA3-201ENST00000537686 ADAMTS13Q76LX8 1427 aa11.76□□□□□ -0.53
GGA3-201ENST00000537686 USP6P35125 1406 aa11.76□□□□□ -0.53
GGA3-201ENST00000537686 CWF19L2Q2TBE0 894 aaKnown RBP11.76□□□□□ -0.53
GGA3-201ENST00000537686 CRACR2BQ8N4Y2 399 aaPredicted RBP11.76□□□□□ -0.53
GGA3-201ENST00000537686 RPGRQ92834 1020 aaKnown RBP11.76□□□□□ -0.53
GGA3-201ENST00000537686 RNF41Q9H4P4 317 aaPredicted RBP11.76□□□□□ -0.53
GGA3-201ENST00000537686 SBNO1A3KN83 1393 aa11.75□□□□□ -0.53
GGA3-201ENST00000537686 MPHOSPH10O00566 681 aaKnown RBP11.75□□□□□ -0.53
GGA3-201ENST00000537686 TMEM132AQ24JP5 1023 aa11.75□□□□□ -0.53
GGA3-201ENST00000537686 ACSBG1Q96GR2 724 aa11.75□□□□□ -0.53
GGA3-201ENST00000537686 NEK1Q96PY6 1258 aa11.75□□□□□ -0.53
GGA3-201ENST00000537686 TANGO6Q9C0B7 1094 aa11.75□□□□□ -0.53
GGA3-201ENST00000537686 ZBTB40Q9NUA8 1239 aa11.75□□□□□ -0.53
GGA3-201ENST00000537686 USP16Q9Y5T5 823 aa11.75□□□□□ -0.53
GGA3-201ENST00000537686 TMEM131LA2VDJ0 1609 aa11.75□□□□□ -0.53
GGA3-201ENST00000537686 MICU3Q86XE3 530 aa11.75□□□□□ -0.53
GGA3-201ENST00000537686 ZNF219Q9P2Y4 722 aaPredicted RBP11.75□□□□□ -0.53
GGA3-201ENST00000537686 GOLGA8AA7E2F4 631 aa11.75□□□□□ -0.53
GGA3-201ENST00000537686 STX6O43752 255 aa11.75□□□□□ -0.53
GGA3-201ENST00000537686 HMGB2P26583 209 aaKnown RBP11.75□□□□□ -0.53
GGA3-201ENST00000537686 CFAP100Q494V2 611 aa11.75□□□□□ -0.53
GGA3-201ENST00000537686 RAB11FIP4Q86YS3 637 aa11.75□□□□□ -0.53
GGA3-201ENST00000537686 ZNF444Q8N0Y2 327 aaPredicted RBP11.75□□□□□ -0.53
GGA3-201ENST00000537686 ATP2B3Q16720 1220 aa11.74□□□□□ -0.53
GGA3-201ENST00000537686 TEX35Q5T0J7 233 aa11.74□□□□□ -0.53
GGA3-201ENST00000537686 BRF1Q92994 677 aa11.74□□□□□ -0.53
GGA3-201ENST00000537686 IQSEC3Q9UPP2 1182 aaPredicted RBP11.74□□□□□ -0.53
GGA3-201ENST00000537686 SMC5Q8IY18 1101 aa11.74□□□□□ -0.53
GGA3-201ENST00000537686 CKAP2LQ8IYA6 745 aa11.74□□□□□ -0.53
GGA3-201ENST00000537686 DCTPP1Q9H773 170 aa11.74□□□□□ -0.53
GGA3-201ENST00000537686 ORC3Q9UBD5 711 aaPredicted RBP11.74□□□□□ -0.53
GGA3-201ENST00000537686 IQGAP1P46940 1657 aa11.74□□□□□ -0.53
GGA3-201ENST00000537686 GJB2P29033 226 aa11.74□□□□□ -0.53
GGA3-201ENST00000537686 CCP110O43303 1012 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms