RNA–Protein interactions for RNA: ENST00000537466.6

GPN3-202, Transcript of GPN-loop GTPase 3, humanhuman

TSL 1 (best) BASIC

Gene GPN3, Length 1,491 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-202ENST00000537466 STYK1Q6J9G0 422 aa22.29■■□□□ 1.16
GPN3-202ENST00000537466 ZNF428Q96B54 188 aa22.29■■□□□ 1.16
GPN3-202ENST00000537466 MASTLQ96GX5 879 aa22.29■■□□□ 1.16
GPN3-202ENST00000537466 CHMP4AQ9BY43 222 aa22.29■■□□□ 1.16
GPN3-202ENST00000537466 MYH16Q9H6N6 1097 aa22.29■■□□□ 1.16
GPN3-202ENST00000537466 DDX60Q8IY21 1712 aaKnown RBP22.29■■□□□ 1.16
GPN3-202ENST00000537466 RIC1Q4ADV7 1423 aa22.29■■□□□ 1.16
GPN3-202ENST00000537466 VAMP4O75379 141 aa22.28■■□□□ 1.16
GPN3-202ENST00000537466 UTP14AQ9BVJ6 771 aaKnown RBP22.28■■□□□ 1.16
GPN3-202ENST00000537466 RIC3Q7Z5B4 369 aa22.28■■□□□ 1.16
GPN3-202ENST00000537466 ZNF784Q8NCA9 323 aaPredicted RBP22.28■■□□□ 1.16
GPN3-202ENST00000537466 ISCA1Q9BUE6 129 aa22.28■■□□□ 1.16
GPN3-202ENST00000537466 STK31Q9BXU1 1019 aa22.28■■□□□ 1.16
GPN3-202ENST00000537466 ATP5J2-PTCD1G3V325 749 aa22.27■■□□□ 1.16
GPN3-202ENST00000537466 ADCY9O60503 1353 aa22.26■■□□□ 1.15
GPN3-202ENST00000537466 NPR1P16066 1061 aa22.26■■□□□ 1.15
GPN3-202ENST00000537466 PRPF40BQ6NWY9 871 aaKnown RBP22.26■■□□□ 1.15
GPN3-202ENST00000537466 G2E3Q7L622 706 aa22.26■■□□□ 1.15
GPN3-202ENST00000537466 SYNE4Q8N205 404 aa22.26■■□□□ 1.15
GPN3-202ENST00000537466 CNKSR1Q969H4 720 aa22.26■■□□□ 1.15
GPN3-202ENST00000537466 ZNF219Q9P2Y4 722 aaPredicted RBP22.26■■□□□ 1.15
GPN3-202ENST00000537466 SLC4A2P04920 1241 aa22.25■■□□□ 1.15
GPN3-202ENST00000537466 CRY2Q49AN0 593 aa22.25■■□□□ 1.15
GPN3-202ENST00000537466 C3orf67Q6ZVT6 689 aa22.25■■□□□ 1.15
GPN3-202ENST00000537466 TAF1P21675 1872 aa22.24■■□□□ 1.15
GPN3-202ENST00000537466 C21orf2O43822 256 aa22.24■■□□□ 1.15
GPN3-202ENST00000537466 TRMT112Q9UI30 125 aaKnown RBP22.24■■□□□ 1.15
GPN3-202ENST00000537466 RNF123Q5XPI4 1314 aa22.23■■□□□ 1.15
GPN3-202ENST00000537466 RASSF7Q02833 373 aa22.23■■□□□ 1.15
GPN3-202ENST00000537466 SLC10A5Q5PT55 438 aa22.23■■□□□ 1.15
GPN3-202ENST00000537466 MYD88Q99836 296 aa22.23■■□□□ 1.15
GPN3-202ENST00000537466 DDX58O95786 925 aaKnown RBP22.22■■□□□ 1.15
GPN3-202ENST00000537466 SH3TC1Q8TE82 1336 aa22.22■■□□□ 1.15
GPN3-202ENST00000537466 CDCA7LQ96GN5 454 aa22.22■■□□□ 1.15
GPN3-202ENST00000537466 MAP3K2Q9Y2U5 619 aa22.22■■□□□ 1.15
GPN3-202ENST00000537466 DICER1Q9UPY3 1922 aaKnown RBP22.21■■□□□ 1.15
GPN3-202ENST00000537466 PI4KAP2A4QPH2 592 aa22.21■■□□□ 1.15
GPN3-202ENST00000537466 E9PSI1 815 aa22.21■■□□□ 1.15
GPN3-202ENST00000537466 HCLS1P14317 486 aaPredicted RBP22.21■■□□□ 1.15
GPN3-202ENST00000537466 SLFN5Q08AF3 891 aa22.21■■□□□ 1.15
GPN3-202ENST00000537466 TRIM28Q13263 835 aaKnown RBP22.21■■□□□ 1.15
GPN3-202ENST00000537466 KSR2Q6VAB6 950 aa22.21■■□□□ 1.15
GPN3-202ENST00000537466 PI4KAP1Q8N8J0 262 aa22.21■■□□□ 1.15
GPN3-202ENST00000537466 METTL22Q9BUU2 404 aaPredicted RBP22.21■■□□□ 1.15
GPN3-202ENST00000537466 TIAM2Q8IVF5 1701 aa22.2■■□□□ 1.14
GPN3-202ENST00000537466 NFKBIEO00221 500 aa22.2■■□□□ 1.14
GPN3-202ENST00000537466 PRELPP51888 382 aa22.2■■□□□ 1.14
GPN3-202ENST00000537466 C9orf131Q5VYM1 1079 aa22.2■■□□□ 1.14
GPN3-202ENST00000537466 C7orf43Q8WVR3 580 aa22.2■■□□□ 1.14
GPN3-202ENST00000537466 RPGRQ92834 1020 aaKnown RBP22.2■■□□□ 1.14
GPN3-202ENST00000537466 FAM89AQ96GI7 184 aa22.2■■□□□ 1.14
GPN3-202ENST00000537466 NLRP3Q96P20 1036 aa22.2■■□□□ 1.14
GPN3-202ENST00000537466 FLIIQ13045 1269 aa22.19■■□□□ 1.14
GPN3-202ENST00000537466 ALDH1B1P30837 517 aa22.18■■□□□ 1.14
GPN3-202ENST00000537466 HOXA10P31260 410 aaPredicted RBP22.18■■□□□ 1.14
GPN3-202ENST00000537466 RTL5Q5HYW3 569 aaPredicted RBP22.18■■□□□ 1.14
GPN3-202ENST00000537466 OLFM4Q6UX06 510 aa22.18■■□□□ 1.14
GPN3-202ENST00000537466 RNF181Q9P0P0 153 aa22.17■■□□□ 1.14
GPN3-202ENST00000537466 RBM17Q96I25 401 aaKnown RBP22.16■■□□□ 1.14
GPN3-202ENST00000537466 IGKV5-2P06315 115 aa22.15■■□□□ 1.14
GPN3-202ENST00000537466 FKBP5Q13451 457 aaPredicted RBP22.15■■□□□ 1.14
GPN3-202ENST00000537466 CCDC191Q8NCU4 936 aa22.15■■□□□ 1.14
GPN3-202ENST00000537466 CRAMP1Q96RY5 1269 aa22.15■■□□□ 1.14
GPN3-202ENST00000537466 MYH3P11055 1940 aa22.15■■□□□ 1.14
GPN3-202ENST00000537466 SLC51AQ86UW1 340 aa22.15■■□□□ 1.14
GPN3-202ENST00000537466 TRMT2AQ8IZ69 625 aaKnown RBP22.15■■□□□ 1.14
GPN3-202ENST00000537466 ZNF526Q8TF50 670 aaPredicted RBP22.15■■□□□ 1.14
GPN3-202ENST00000537466 CWC25Q9NXE8 425 aaPredicted RBP22.15■■□□□ 1.14
GPN3-202ENST00000537466 LMNB1P20700 586 aa22.14■■□□□ 1.13
GPN3-202ENST00000537466 CWF19L2Q2TBE0 894 aaKnown RBP22.14■■□□□ 1.13
GPN3-202ENST00000537466 CCDC93Q567U6 631 aa22.14■■□□□ 1.13
GPN3-202ENST00000537466 SOGA3Q5TF21 947 aa22.14■■□□□ 1.13
GPN3-202ENST00000537466 ZBTB38Q8NAP3 1195 aaPredicted RBP22.14■■□□□ 1.13
GPN3-202ENST00000537466 JARID2Q92833 1246 aaPredicted RBP22.14■■□□□ 1.13
GPN3-202ENST00000537466 SNED1Q8TER0 1413 aa22.14■■□□□ 1.13
GPN3-202ENST00000537466 COL4A1P02462 1669 aa22.13■■□□□ 1.13
GPN3-202ENST00000537466 ABCC4O15439 1325 aa22.13■■□□□ 1.13
GPN3-202ENST00000537466 IRS4O14654 1257 aaPredicted RBP22.13■■□□□ 1.13
GPN3-202ENST00000537466 TAOK3Q9H2K8 898 aa22.13■■□□□ 1.13
GPN3-202ENST00000537466 LTBP3Q9NS15 1303 aa22.13■■□□□ 1.13
GPN3-202ENST00000537466 NEXNQ0ZGT2 675 aa22.12■■□□□ 1.13
GPN3-202ENST00000537466 NEURL1BA8MQ27 555 aa22.11■■□□□ 1.13
GPN3-202ENST00000537466 PCCAP05165 728 aaPredicted RBP22.11■■□□□ 1.13
GPN3-202ENST00000537466 DNAAF4Q8WXU2 420 aa22.11■■□□□ 1.13
GPN3-202ENST00000537466 PPEF1O14829 653 aaPredicted RBP22.1■■□□□ 1.13
GPN3-202ENST00000537466 F6X3S4 739 aa22.09■■□□□ 1.13
GPN3-202ENST00000537466 SF3B3Q15393 1217 aaKnown RBP22.09■■□□□ 1.13
GPN3-202ENST00000537466 GPBP1L1Q9HC44 474 aaPredicted RBP22.09■■□□□ 1.13
GPN3-202ENST00000537466 LRRC37AA6NMS7 1700 aa22.09■■□□□ 1.13
GPN3-202ENST00000537466 DDX46Q7L014 1031 aaKnown RBP22.09■■□□□ 1.13
GPN3-202ENST00000537466 HNRNPUQ00839 825 aaKnown RBP eCLIP22.08■■□□□ 1.12
GPN3-202ENST00000537466 FKBP4Q02790 459 aaKnown RBP eCLIP22.08■■□□□ 1.12
GPN3-202ENST00000537466 RTKN2Q8IZC4 609 aa22.08■■□□□ 1.12
GPN3-202ENST00000537466 MRPL50Q8N5N7 158 aaKnown RBP22.08■■□□□ 1.12
GPN3-202ENST00000537466 GRAPQ13588 217 aa22.07■■□□□ 1.12
GPN3-202ENST00000537466 GRAPLQ8TC17 118 aaPredicted RBP22.07■■□□□ 1.12
GPN3-202ENST00000537466 SSH1Q8WYL5 1049 aa22.07■■□□□ 1.12
GPN3-202ENST00000537466 CDHR2Q9BYE9 1310 aa22.07■■□□□ 1.12
GPN3-202ENST00000537466 SPEF2Q9C093 1822 aa22.07■■□□□ 1.12
GPN3-202ENST00000537466 GCKRQ14397 625 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms