RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 AK9Q5TCS8 1911 aa16.4■□□□□ 0.22
SMG6-203ENST00000536871 EXOC5O00471 708 aa16.39■□□□□ 0.22
SMG6-203ENST00000536871 PTCD1O75127 700 aaKnown RBP16.39■□□□□ 0.22
SMG6-203ENST00000536871 ATP5JP18859 108 aa16.39■□□□□ 0.22
SMG6-203ENST00000536871 CUL4AQ13619 759 aa16.39■□□□□ 0.22
SMG6-203ENST00000536871 HSP90AB3PQ58FF7 597 aa16.39■□□□□ 0.22
SMG6-203ENST00000536871 EPHA10Q5JZY3 1008 aa16.39■□□□□ 0.22
SMG6-203ENST00000536871 L1TD1Q5T7N2 865 aaKnown RBP16.39■□□□□ 0.22
SMG6-203ENST00000536871 ROBO1Q9Y6N7 1651 aa16.39■□□□□ 0.21
SMG6-203ENST00000536871 AFDNP55196 1824 aaKnown RBP16.39■□□□□ 0.21
SMG6-203ENST00000536871 ATP5J2-PTCD1G3V325 749 aa16.39■□□□□ 0.21
SMG6-203ENST00000536871 TRAK2O60296 914 aa16.39■□□□□ 0.21
SMG6-203ENST00000536871 A1BGP04217 495 aa16.39■□□□□ 0.21
SMG6-203ENST00000536871 IL15P40933 162 aaPredicted RBP16.38■□□□□ 0.21
SMG6-203ENST00000536871 TCIRG1Q13488 830 aa16.38■□□□□ 0.21
SMG6-203ENST00000536871 TNNI3KQ59H18 835 aa16.38■□□□□ 0.21
SMG6-203ENST00000536871 CWC27Q6UX04 472 aaKnown RBP16.38■□□□□ 0.21
SMG6-203ENST00000536871 ISCA1Q9BUE6 129 aa16.38■□□□□ 0.21
SMG6-203ENST00000536871 TM6SF1Q9BZW5 370 aa16.38■□□□□ 0.21
SMG6-203ENST00000536871 FPGT-TNNI3KV9GXZ4 949 aa16.38■□□□□ 0.21
SMG6-203ENST00000536871 NUP188Q5SRE5 1749 aa16.38■□□□□ 0.21
SMG6-203ENST00000536871 CIAO1O76071 339 aa16.37■□□□□ 0.21
SMG6-203ENST00000536871 MAP4K4O95819 1239 aaPredicted RBP16.37■□□□□ 0.21
SMG6-203ENST00000536871 TTLL7Q6ZT98 887 aa16.37■□□□□ 0.21
SMG6-203ENST00000536871 KCNB2Q92953 911 aa16.37■□□□□ 0.21
SMG6-203ENST00000536871 TMX3Q96JJ7 454 aa16.37■□□□□ 0.21
SMG6-203ENST00000536871 SIL1Q9H173 461 aa16.37■□□□□ 0.21
SMG6-203ENST00000536871 BCL9O00512 1426 aa16.37■□□□□ 0.21
SMG6-203ENST00000536871 CYP2E1P05181 493 aaPredicted RBP16.37■□□□□ 0.21
SMG6-203ENST00000536871 ZKSCAN1P17029 563 aaPredicted RBP16.37■□□□□ 0.21
SMG6-203ENST00000536871 PIP4K2AP48426 406 aaPredicted RBP16.37■□□□□ 0.21
SMG6-203ENST00000536871 FOXO4P98177 505 aa16.37■□□□□ 0.21
SMG6-203ENST00000536871 LMBR1LQ6UX01 489 aa16.37■□□□□ 0.21
SMG6-203ENST00000536871 PIGBQ92521 554 aa16.37■□□□□ 0.21
SMG6-203ENST00000536871 PLA2G12BQ9BX93 195 aa16.37■□□□□ 0.21
SMG6-203ENST00000536871 CCDC8Q9H0W5 538 aaPredicted RBP16.37■□□□□ 0.21
SMG6-203ENST00000536871 RNF20Q5VTR2 975 aa16.36■□□□□ 0.21
SMG6-203ENST00000536871 PALD1Q9ULE6 856 aa16.36■□□□□ 0.21
SMG6-203ENST00000536871 TOGARAM1Q9Y4F4 1720 aa16.36■□□□□ 0.21
SMG6-203ENST00000536871 PCCAP05165 728 aaPredicted RBP16.35■□□□□ 0.21
SMG6-203ENST00000536871 PDIA4P13667 645 aaKnown RBP16.35■□□□□ 0.21
SMG6-203ENST00000536871 FSD1Q9BTV5 496 aa16.35■□□□□ 0.21
SMG6-203ENST00000536871 SNX14Q9Y5W7 946 aa16.35■□□□□ 0.21
SMG6-203ENST00000536871 CCDC171Q6TFL3 1326 aa16.35■□□□□ 0.21
SMG6-203ENST00000536871 PSMA5P28066 241 aa16.34■□□□□ 0.21
SMG6-203ENST00000536871 TFCP2Q12800 502 aa16.34■□□□□ 0.21
SMG6-203ENST00000536871 ZBTB3Q9H5J0 574 aa16.34■□□□□ 0.21
SMG6-203ENST00000536871 FOXD4L1Q9NU39 408 aa16.34■□□□□ 0.21
SMG6-203ENST00000536871 HMG20BQ9P0W2 317 aa16.34■□□□□ 0.21
SMG6-203ENST00000536871 MAP3K15Q6ZN16 1313 aa16.33■□□□□ 0.21
SMG6-203ENST00000536871 CDHR2Q9BYE9 1310 aa16.33■□□□□ 0.21
SMG6-203ENST00000536871 COL16A1Q07092 1604 aaPredicted RBP16.33■□□□□ 0.2
SMG6-203ENST00000536871 EYA2O00167 538 aa16.33■□□□□ 0.2
SMG6-203ENST00000536871 BAG4O95429 457 aaKnown RBP16.33■□□□□ 0.2
SMG6-203ENST00000536871 LRRFIP1Q32MZ4 808 aaKnown RBP16.33■□□□□ 0.2
SMG6-203ENST00000536871 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.33■□□□□ 0.2
SMG6-203ENST00000536871 MAP4K1Q92918 833 aa16.33■□□□□ 0.2
SMG6-203ENST00000536871 ZSCAN31Q96LW9 406 aaPredicted RBP16.33■□□□□ 0.2
SMG6-203ENST00000536871 HAUS7Q99871 368 aa16.33■□□□□ 0.2
SMG6-203ENST00000536871 BOLA2Q9H3K6 86 aa16.33■□□□□ 0.2
SMG6-203ENST00000536871 DBNLQ9UJU6 430 aaKnown RBP16.33■□□□□ 0.2
SMG6-203ENST00000536871 ASAP1Q9ULH1 1129 aa16.33■□□□□ 0.2
SMG6-203ENST00000536871 LTBP4Q8N2S1 1624 aa16.33■□□□□ 0.2
SMG6-203ENST00000536871 ERVV-1B6SEH8 477 aa16.32■□□□□ 0.2
SMG6-203ENST00000536871 SSFA2P28290 1259 aa16.32■□□□□ 0.2
SMG6-203ENST00000536871 VPS53Q5VIR6 699 aa16.32■□□□□ 0.2
SMG6-203ENST00000536871 GIGYF2Q6Y7W6 1299 aaKnown RBP16.32■□□□□ 0.2
SMG6-203ENST00000536871 DNAJC10Q8IXB1 793 aa16.32■□□□□ 0.2
SMG6-203ENST00000536871 ZBTB38Q8NAP3 1195 aaPredicted RBP16.32■□□□□ 0.2
SMG6-203ENST00000536871 KLHDC4Q8TBB5 520 aa16.32■□□□□ 0.2
SMG6-203ENST00000536871 IL25Q9H293 177 aa16.32■□□□□ 0.2
SMG6-203ENST00000536871 AKAP2Q9Y2D5 859 aa16.32■□□□□ 0.2
SMG6-203ENST00000536871 CHMP3Q9Y3E7 222 aa16.32■□□□□ 0.2
SMG6-203ENST00000536871 NECTIN1Q15223 517 aa16.31■□□□□ 0.2
SMG6-203ENST00000536871 CCDC57Q2TAC2 916 aa16.31■□□□□ 0.2
SMG6-203ENST00000536871 TLR7Q9NYK1 1049 aaKnown RBP16.31■□□□□ 0.2
SMG6-203ENST00000536871 LIMCH1Q9UPQ0 1083 aa16.31■□□□□ 0.2
SMG6-203ENST00000536871 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.31■□□□□ 0.2
SMG6-203ENST00000536871 IL6STP40189 918 aaPredicted RBP16.31■□□□□ 0.2
SMG6-203ENST00000536871 NMIQ13287 307 aaPredicted RBP16.31■□□□□ 0.2
SMG6-203ENST00000536871 TTC14Q96N46 770 aa16.31■□□□□ 0.2
SMG6-203ENST00000536871 SH2B1Q9NRF2 756 aaPredicted RBP16.31■□□□□ 0.2
SMG6-203ENST00000536871 CYP46A1Q9Y6A2 500 aa16.31■□□□□ 0.2
SMG6-203ENST00000536871 JCADQ9P266 1359 aa16.31■□□□□ 0.2
SMG6-203ENST00000536871 MED23Q9ULK4 1368 aa16.31■□□□□ 0.2
SMG6-203ENST00000536871 TJP1Q07157 1748 aa16.3■□□□□ 0.2
SMG6-203ENST00000536871 KCNJ4P48050 445 aa16.3■□□□□ 0.2
SMG6-203ENST00000536871 KRT32Q14532 448 aa16.3■□□□□ 0.2
SMG6-203ENST00000536871 TSGA10IPQ3SY00 556 aa16.3■□□□□ 0.2
SMG6-203ENST00000536871 ZSWIM6Q9HCJ5 1215 aa16.3■□□□□ 0.2
SMG6-203ENST00000536871 WNK3Q9BYP7 1800 aa16.29■□□□□ 0.2
SMG6-203ENST00000536871 SPATA31A1Q5TZJ5 1347 aa16.29■□□□□ 0.2
SMG6-203ENST00000536871 GOLGA6L3A6NEY3 463 aa16.29■□□□□ 0.2
SMG6-203ENST00000536871 CYP19A1P11511 503 aaPredicted RBP16.29■□□□□ 0.2
SMG6-203ENST00000536871 ANKRD1Q15327 319 aa16.29■□□□□ 0.2
SMG6-203ENST00000536871 KLHL40Q2TBA0 621 aa16.29■□□□□ 0.2
SMG6-203ENST00000536871 ATG9AQ7Z3C6 839 aa16.29■□□□□ 0.2
SMG6-203ENST00000536871 AK7Q96M32 723 aa16.29■□□□□ 0.2
SMG6-203ENST00000536871 UPF3BQ9BZI7 483 aaKnown RBP16.29■□□□□ 0.2
SMG6-203ENST00000536871 ALDH8A1Q9H2A2 487 aaPredicted RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms