RNA–Protein interactions for RNA: ENST00000536805.5

PTCD2-211, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2 BASIC

Gene PTCD2, Length 1,911 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-211ENST00000536805 CREB3L3Q68CJ9 461 aa14.38□□□□□ -0.11
PTCD2-211ENST00000536805 PDCL2Q8N4E4 241 aa14.38□□□□□ -0.11
PTCD2-211ENST00000536805 SCAND2PQ9GZW5 306 aaPredicted RBP14.38□□□□□ -0.11
PTCD2-211ENST00000536805 DDX19AQ9NUU7 478 aaKnown RBP14.38□□□□□ -0.11
PTCD2-211ENST00000536805 RBM8AQ9Y5S9 174 aaKnown RBP14.38□□□□□ -0.11
PTCD2-211ENST00000536805 LMO7Q8WWI1 1683 aa14.38□□□□□ -0.11
PTCD2-211ENST00000536805 PI4KAP2A4QPH2 592 aa14.37□□□□□ -0.11
PTCD2-211ENST00000536805 PI4KAP1Q8N8J0 262 aa14.37□□□□□ -0.11
PTCD2-211ENST00000536805 SPC24Q8NBT2 197 aa14.37□□□□□ -0.11
PTCD2-211ENST00000536805 MAP4K1Q92918 833 aa14.37□□□□□ -0.11
PTCD2-211ENST00000536805 CHPF2Q9P2E5 772 aa14.37□□□□□ -0.11
PTCD2-211ENST00000536805 TPCN1Q9ULQ1 816 aa14.37□□□□□ -0.11
PTCD2-211ENST00000536805 NPHP3Q7Z494 1330 aa14.37□□□□□ -0.11
PTCD2-211ENST00000536805 IFIT2P09913 472 aaKnown RBP14.37□□□□□ -0.11
PTCD2-211ENST00000536805 NLRP6P59044 892 aa14.37□□□□□ -0.11
PTCD2-211ENST00000536805 CDC37L1Q7L3B6 337 aa14.37□□□□□ -0.11
PTCD2-211ENST00000536805 LIG1P18858 919 aa14.36□□□□□ -0.11
PTCD2-211ENST00000536805 LTKP29376 864 aa14.36□□□□□ -0.11
PTCD2-211ENST00000536805 TDRD7Q8NHU6 1098 aaKnown RBP14.36□□□□□ -0.11
PTCD2-211ENST00000536805 TNMDQ9H2S6 317 aa14.36□□□□□ -0.11
PTCD2-211ENST00000536805 CLSTN2Q9H4D0 955 aa14.36□□□□□ -0.11
PTCD2-211ENST00000536805 PRDM10Q9NQV6 1147 aa14.36□□□□□ -0.11
PTCD2-211ENST00000536805 JCADQ9P266 1359 aa14.36□□□□□ -0.11
PTCD2-211ENST00000536805 CAVIN2O95810 425 aa14.35□□□□□ -0.11
PTCD2-211ENST00000536805 EIF2S2P20042 333 aaKnown RBP14.35□□□□□ -0.11
PTCD2-211ENST00000536805 PTGS1P23219 599 aa14.35□□□□□ -0.11
PTCD2-211ENST00000536805 RNF20Q5VTR2 975 aa14.35□□□□□ -0.11
PTCD2-211ENST00000536805 PLA2G4DQ86XP0 818 aa14.35□□□□□ -0.11
PTCD2-211ENST00000536805 NECAB1Q8N987 351 aa14.35□□□□□ -0.11
PTCD2-211ENST00000536805 SLC27A2O14975 620 aa14.35□□□□□ -0.11
PTCD2-211ENST00000536805 ATP2B3Q16720 1220 aa14.35□□□□□ -0.11
PTCD2-211ENST00000536805 PLPPR3Q6T4P5 718 aa14.35□□□□□ -0.11
PTCD2-211ENST00000536805 CBX8Q9HC52 389 aa14.35□□□□□ -0.11
PTCD2-211ENST00000536805 LTN1O94822 1766 aa14.34□□□□□ -0.11
PTCD2-211ENST00000536805 NPHP4O75161 1426 aaPredicted RBP14.34□□□□□ -0.11
PTCD2-211ENST00000536805 MED23Q9ULK4 1368 aa14.34□□□□□ -0.11
PTCD2-211ENST00000536805 SMTNL1A8MU46 457 aa14.34□□□□□ -0.11
PTCD2-211ENST00000536805 GIGYF1O75420 1035 aaPredicted RBP14.34□□□□□ -0.11
PTCD2-211ENST00000536805 ZNF75DP51815 510 aa14.34□□□□□ -0.11
PTCD2-211ENST00000536805 LUZP1Q86V48 1076 aa14.34□□□□□ -0.11
PTCD2-211ENST00000536805 SPATA32Q96LK8 384 aa14.34□□□□□ -0.11
PTCD2-211ENST00000536805 HMG20BQ9P0W2 317 aa14.34□□□□□ -0.11
PTCD2-211ENST00000536805 AMOTL2Q9Y2J4 779 aa14.34□□□□□ -0.11
PTCD2-211ENST00000536805 ARHGAP23Q9P227 1491 aa14.34□□□□□ -0.11
PTCD2-211ENST00000536805 OVOS2A0A0G2JMS6 1433 aa14.34□□□□□ -0.11
PTCD2-211ENST00000536805 GOLGA6L4A6NEF3 574 aa14.33□□□□□ -0.11
PTCD2-211ENST00000536805 RPS6KB1P23443 525 aa14.33□□□□□ -0.11
PTCD2-211ENST00000536805 CDC25BP30305 580 aa14.33□□□□□ -0.11
PTCD2-211ENST00000536805 KCNJ4P48050 445 aa14.33□□□□□ -0.11
PTCD2-211ENST00000536805 NMIQ13287 307 aaPredicted RBP14.33□□□□□ -0.11
PTCD2-211ENST00000536805 TSGA10IPQ3SY00 556 aa14.33□□□□□ -0.11
PTCD2-211ENST00000536805 ANO6Q4KMQ2 910 aa14.33□□□□□ -0.11
PTCD2-211ENST00000536805 BLOC1S2Q6QNY1 142 aa14.33□□□□□ -0.11
PTCD2-211ENST00000536805 AACSQ86V21 672 aa14.33□□□□□ -0.11
PTCD2-211ENST00000536805 FEZ1Q99689 392 aa14.33□□□□□ -0.11
PTCD2-211ENST00000536805 DACT1Q9NYF0 836 aa14.33□□□□□ -0.11
PTCD2-211ENST00000536805 MRC1P22897 1456 aa14.33□□□□□ -0.12
PTCD2-211ENST00000536805 CBX1P83916 185 aa14.33□□□□□ -0.12
PTCD2-211ENST00000536805 CCDC186Q7Z3E2 898 aa14.33□□□□□ -0.12
PTCD2-211ENST00000536805 LEO1Q8WVC0 666 aaPredicted RBP14.33□□□□□ -0.12
PTCD2-211ENST00000536805 DBF4Q9UBU7 674 aaPredicted RBP14.33□□□□□ -0.12
PTCD2-211ENST00000536805 TBX22Q9Y458 520 aa14.33□□□□□ -0.12
PTCD2-211ENST00000536805 NCAPD2Q15021 1401 aa14.32□□□□□ -0.12
PTCD2-211ENST00000536805 FAM177BA6PVY3 158 aa14.32□□□□□ -0.12
PTCD2-211ENST00000536805 ILDR2Q71H61 639 aa14.32□□□□□ -0.12
PTCD2-211ENST00000536805 UTYO14607 1347 aa14.31□□□□□ -0.12
PTCD2-211ENST00000536805 KIF20AO95235 890 aa14.31□□□□□ -0.12
PTCD2-211ENST00000536805 CAMK4Q16566 473 aa14.31□□□□□ -0.12
PTCD2-211ENST00000536805 ZSCAN25Q6NSZ9 544 aa14.31□□□□□ -0.12
PTCD2-211ENST00000536805 FERMT3Q86UX7 667 aa14.31□□□□□ -0.12
PTCD2-211ENST00000536805 FAM227BQ96M60 508 aa14.31□□□□□ -0.12
PTCD2-211ENST00000536805 C9orf78Q9NZ63 289 aaPredicted RBP14.31□□□□□ -0.12
PTCD2-211ENST00000536805 PAXBP1Q9Y5B6 917 aa14.31□□□□□ -0.12
PTCD2-211ENST00000536805 EID1Q9Y6B2 187 aa14.31□□□□□ -0.12
PTCD2-211ENST00000536805 PHRF1Q9P1Y6 1649 aaKnown RBP14.31□□□□□ -0.12
PTCD2-211ENST00000536805 TOB2Q14106 344 aaPredicted RBP14.31□□□□□ -0.12
PTCD2-211ENST00000536805 KSR2Q6VAB6 950 aa14.31□□□□□ -0.12
PTCD2-211ENST00000536805 SLC26A8Q96RN1 970 aa14.31□□□□□ -0.12
PTCD2-211ENST00000536805 TRIM5Q9C035 493 aa14.31□□□□□ -0.12
PTCD2-211ENST00000536805 NFAT5O94916 1531 aa14.3□□□□□ -0.12
PTCD2-211ENST00000536805 NCBP1Q09161 790 aaKnown RBP14.3□□□□□ -0.12
PTCD2-211ENST00000536805 KRT32Q14532 448 aa14.3□□□□□ -0.12
PTCD2-211ENST00000536805 LARP1Q6PKG0 1096 aaKnown RBP14.3□□□□□ -0.12
PTCD2-211ENST00000536805 DRC7Q8IY82 874 aa14.3□□□□□ -0.12
PTCD2-211ENST00000536805 CKAP2LQ8IYA6 745 aa14.3□□□□□ -0.12
PTCD2-211ENST00000536805 LTV1Q96GA3 475 aaPredicted RBP14.3□□□□□ -0.12
PTCD2-211ENST00000536805 PA2G4Q9UQ80 394 aaKnown RBP14.3□□□□□ -0.12
PTCD2-211ENST00000536805 MAP3K2Q9Y2U5 619 aa14.3□□□□□ -0.12
PTCD2-211ENST00000536805 AKAP4Q5JQC9 854 aa14.29□□□□□ -0.12
PTCD2-211ENST00000536805 FAM173BQ6P4H8 233 aa14.29□□□□□ -0.12
PTCD2-211ENST00000536805 SARM1Q6SZW1 724 aa14.29□□□□□ -0.12
PTCD2-211ENST00000536805 IP6K1Q92551 441 aa14.29□□□□□ -0.12
PTCD2-211ENST00000536805 RFX7Q2KHR2 1363 aa14.29□□□□□ -0.12
PTCD2-211ENST00000536805 A0A0D9SFI3 127 aa14.29□□□□□ -0.12
PTCD2-211ENST00000536805 BTBD11A6QL63 1104 aa14.29□□□□□ -0.12
PTCD2-211ENST00000536805 NEMFO60524 1076 aa14.29□□□□□ -0.12
PTCD2-211ENST00000536805 SASH1O94885 1247 aa14.29□□□□□ -0.12
PTCD2-211ENST00000536805 ZNF165P49910 485 aa14.29□□□□□ -0.12
PTCD2-211ENST00000536805 TEFQ10587 303 aa14.29□□□□□ -0.12
PTCD2-211ENST00000536805 RESTQ13127 1097 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms