RNA–Protein interactions for RNA: ENST00000536603.5

CCDC61-201, Transcript of coiled-coil domain containing 61, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC61, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-201ENST00000536603 DDNO94850 711 aaPredicted RBP23.23■■□□□ 1.31
CCDC61-201ENST00000536603 HLFQ16534 295 aa23.23■■□□□ 1.31
CCDC61-201ENST00000536603 KIF6Q6ZMV9 814 aa23.23■■□□□ 1.31
CCDC61-201ENST00000536603 CHADLQ6NUI6 762 aa23.22■■□□□ 1.31
CCDC61-201ENST00000536603 DDX21Q9NR30 783 aaKnown RBP eCLIP23.22■■□□□ 1.31
CCDC61-201ENST00000536603 CHPF2Q9P2E5 772 aa23.22■■□□□ 1.31
CCDC61-201ENST00000536603 ARFGEF2Q9Y6D5 1785 aa23.22■■□□□ 1.31
CCDC61-201ENST00000536603 ERVV-1B6SEH8 477 aa23.21■■□□□ 1.31
CCDC61-201ENST00000536603 TSPYL6Q8N831 410 aa23.21■■□□□ 1.31
CCDC61-201ENST00000536603 MAP3K15Q6ZN16 1313 aa23.21■■□□□ 1.31
CCDC61-201ENST00000536603 AIMP1Q12904 312 aaKnown RBP23.2■■□□□ 1.3
CCDC61-201ENST00000536603 COPS6Q7L5N1 327 aa23.2■■□□□ 1.3
CCDC61-201ENST00000536603 ZBTB3Q9H5J0 574 aa23.2■■□□□ 1.3
CCDC61-201ENST00000536603 SPINK5Q9NQ38 1064 aaPredicted RBP23.2■■□□□ 1.3
CCDC61-201ENST00000536603 DBF4Q9UBU7 674 aaPredicted RBP23.2■■□□□ 1.3
CCDC61-201ENST00000536603 FANCIQ9NVI1 1328 aa23.19■■□□□ 1.3
CCDC61-201ENST00000536603 RGL2O15211 777 aa23.19■■□□□ 1.3
CCDC61-201ENST00000536603 XAGE3Q8WTP9 111 aa23.19■■□□□ 1.3
CCDC61-201ENST00000536603 FAM177BA6PVY3 158 aa23.18■■□□□ 1.3
CCDC61-201ENST00000536603 CCDC93Q567U6 631 aa23.18■■□□□ 1.3
CCDC61-201ENST00000536603 NIP7Q9Y221 180 aaKnown RBP eCLIP23.18■■□□□ 1.3
CCDC61-201ENST00000536603 ZNF521Q96K83 1311 aa23.17■■□□□ 1.3
CCDC61-201ENST00000536603 IQCA1LA6NCM1 817 aa23.17■■□□□ 1.3
CCDC61-201ENST00000536603 POTEIP0CG38 1075 aa23.17■■□□□ 1.3
CCDC61-201ENST00000536603 POTEJP0CG39 1038 aa23.17■■□□□ 1.3
CCDC61-201ENST00000536603 NPR1P16066 1061 aa23.17■■□□□ 1.3
CCDC61-201ENST00000536603 GOLGA2Q08379 1002 aa23.17■■□□□ 1.3
CCDC61-201ENST00000536603 TPTE2Q6XPS3 522 aa23.17■■□□□ 1.3
CCDC61-201ENST00000536603 CREBZFQ9NS37 354 aa23.17■■□□□ 1.3
CCDC61-201ENST00000536603 MKRN1Q9UHC7 482 aaKnown RBP23.17■■□□□ 1.3
CCDC61-201ENST00000536603 GTF2E1P29083 439 aaPredicted RBP23.16■■□□□ 1.3
CCDC61-201ENST00000536603 TWISTNBQ3B726 338 aaPredicted RBP23.16■■□□□ 1.3
CCDC61-201ENST00000536603 MYH16Q9H6N6 1097 aa23.16■■□□□ 1.3
CCDC61-201ENST00000536603 HYPKQ9NX55 129 aa23.16■■□□□ 1.3
CCDC61-201ENST00000536603 CCDC30Q5VVM6 783 aa23.15■■□□□ 1.3
CCDC61-201ENST00000536603 GIGYF2Q6Y7W6 1299 aaKnown RBP23.15■■□□□ 1.3
CCDC61-201ENST00000536603 CHMP4AQ9BY43 222 aa23.15■■□□□ 1.3
CCDC61-201ENST00000536603 EXOSC9Q06265 439 aaKnown RBP23.14■■□□□ 1.29
CCDC61-201ENST00000536603 SCN4AP35499 1836 aa23.13■■□□□ 1.29
CCDC61-201ENST00000536603 GPTP24298 496 aa23.13■■□□□ 1.29
CCDC61-201ENST00000536603 EAPPQ56P03 285 aaPredicted RBP23.13■■□□□ 1.29
CCDC61-201ENST00000536603 NUP98P52948 1817 aa23.12■■□□□ 1.29
CCDC61-201ENST00000536603 FKBP4Q02790 459 aaKnown RBP eCLIP23.12■■□□□ 1.29
CCDC61-201ENST00000536603 LDHDQ86WU2 507 aa23.12■■□□□ 1.29
CCDC61-201ENST00000536603 C7orf43Q8WVR3 580 aa23.12■■□□□ 1.29
CCDC61-201ENST00000536603 ZNF277Q9NRM2 450 aaPredicted RBP23.12■■□□□ 1.29
CCDC61-201ENST00000536603 CLEC11AQ9Y240 323 aa23.12■■□□□ 1.29
CCDC61-201ENST00000536603 TCERG1O14776 1098 aaKnown RBP23.11■■□□□ 1.29
CCDC61-201ENST00000536603 ANKRD13DQ6ZTN6 518 aa23.11■■□□□ 1.29
CCDC61-201ENST00000536603 ZNF34Q8IZ26 560 aa23.11■■□□□ 1.29
CCDC61-201ENST00000536603 RTKN2Q8IZC4 609 aa23.11■■□□□ 1.29
CCDC61-201ENST00000536603 TAF1DQ9H5J8 278 aaPredicted RBP23.11■■□□□ 1.29
CCDC61-201ENST00000536603 PHAXQ9H814 394 aaKnown RBP23.11■■□□□ 1.29
CCDC61-201ENST00000536603 PCNTO95613 3336 aa23.11■■□□□ 1.29
CCDC61-201ENST00000536603 ALDH1B1P30837 517 aa23.1■■□□□ 1.29
CCDC61-201ENST00000536603 OLFM4Q6UX06 510 aa23.1■■□□□ 1.29
CCDC61-201ENST00000536603 L3MBTL3Q96JM7 780 aaPredicted RBP23.1■■□□□ 1.29
CCDC61-201ENST00000536603 VAMP4O75379 141 aa23.09■■□□□ 1.29
CCDC61-201ENST00000536603 PLBD2Q8NHP8 589 aa23.09■■□□□ 1.29
CCDC61-201ENST00000536603 STK31Q9BXU1 1019 aa23.09■■□□□ 1.29
CCDC61-201ENST00000536603 HACL1Q9UJ83 578 aa23.09■■□□□ 1.29
CCDC61-201ENST00000536603 UBN2Q6ZU65 1347 aa23.08■■□□□ 1.29
CCDC61-201ENST00000536603 ZNF541Q9H0D2 1346 aa23.08■■□□□ 1.29
CCDC61-201ENST00000536603 KLRG2A4D1S0 409 aaPredicted RBP23.08■■□□□ 1.29
CCDC61-201ENST00000536603 E9PSI1 815 aa23.07■■□□□ 1.28
CCDC61-201ENST00000536603 TCIRG1Q13488 830 aa23.07■■□□□ 1.28
CCDC61-201ENST00000536603 HSP90AB3PQ58FF7 597 aa23.07■■□□□ 1.28
CCDC61-201ENST00000536603 SUSD4Q5VX71 490 aa23.07■■□□□ 1.28
CCDC61-201ENST00000536603 SLC4A2P04920 1241 aa23.06■■□□□ 1.28
CCDC61-201ENST00000536603 IARSP41252 1262 aaKnown RBP23.06■■□□□ 1.28
CCDC61-201ENST00000536603 RIC3Q7Z5B4 369 aa23.06■■□□□ 1.28
CCDC61-201ENST00000536603 SYNE4Q8N205 404 aa23.06■■□□□ 1.28
CCDC61-201ENST00000536603 CDCA7LQ96GN5 454 aa23.06■■□□□ 1.28
CCDC61-201ENST00000536603 NYXQ9GZU5 481 aa23.06■■□□□ 1.28
CCDC61-201ENST00000536603 PASKQ96RG2 1323 aa23.06■■□□□ 1.28
CCDC61-201ENST00000536603 CNTNAP1P78357 1384 aa23.05■■□□□ 1.28
CCDC61-201ENST00000536603 TMEM88BA6NKF7 163 aa23.05■■□□□ 1.28
CCDC61-201ENST00000536603 EPHX2P34913 555 aa23.05■■□□□ 1.28
CCDC61-201ENST00000536603 SLFN5Q08AF3 891 aa23.05■■□□□ 1.28
CCDC61-201ENST00000536603 PARP10Q53GL7 1025 aa23.05■■□□□ 1.28
CCDC61-201ENST00000536603 NUTM1Q86Y26 1132 aa23.05■■□□□ 1.28
CCDC61-201ENST00000536603 PPP1R42Q7Z4L9 355 aa23.04■■□□□ 1.28
CCDC61-201ENST00000536603 PNMA8AQ86V59 439 aaPredicted RBP23.04■■□□□ 1.28
CCDC61-201ENST00000536603 JDP2Q8WYK2 163 aa23.04■■□□□ 1.28
CCDC61-201ENST00000536603 AIDAQ96BJ3 306 aa23.04■■□□□ 1.28
CCDC61-201ENST00000536603 RNF123Q5XPI4 1314 aa23.04■■□□□ 1.28
CCDC61-201ENST00000536603 NLRP10Q86W26 655 aa23.03■■□□□ 1.28
CCDC61-201ENST00000536603 RPGRQ92834 1020 aaKnown RBP23.03■■□□□ 1.28
CCDC61-201ENST00000536603 DDX58O95786 925 aaKnown RBP23.02■■□□□ 1.28
CCDC61-201ENST00000536603 G2E3Q7L622 706 aa23.02■■□□□ 1.28
CCDC61-201ENST00000536603 UTP14AQ9BVJ6 771 aaKnown RBP23.02■■□□□ 1.28
CCDC61-201ENST00000536603 ATP5J2-PTCD1G3V325 749 aa23.01■■□□□ 1.27
CCDC61-201ENST00000536603 FOXN1O15353 648 aa23.01■■□□□ 1.27
CCDC61-201ENST00000536603 NTSR2O95665 410 aa23.01■■□□□ 1.27
CCDC61-201ENST00000536603 ITGBL1O95965 494 aaPredicted RBP23.01■■□□□ 1.27
CCDC61-201ENST00000536603 GPC2Q8N158 579 aa23.01■■□□□ 1.27
CCDC61-201ENST00000536603 ZNF428Q96B54 188 aa23.01■■□□□ 1.27
CCDC61-201ENST00000536603 GJA3Q9Y6H8 435 aa23.01■■□□□ 1.27
CCDC61-201ENST00000536603 IBTKQ9P2D0 1353 aaPredicted RBP23.01■■□□□ 1.27
CCDC61-201ENST00000536603 FZD9O00144 591 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms