RNA–Protein interactions for RNA: ENST00000536212.1

VPS33A-203, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-203ENST00000536212 SNX21Q969T3 373 aa7.19□□□□□ -1.26
VPS33A-203ENST00000536212 KIFC2Q96AC6 838 aa7.19□□□□□ -1.26
VPS33A-203ENST00000536212 C22orf23Q9BZE7 217 aa7.19□□□□□ -1.26
VPS33A-203ENST00000536212 CHMP4BQ9H444 224 aaKnown RBP7.19□□□□□ -1.26
VPS33A-203ENST00000536212 ZBTB3Q9H5J0 574 aa7.19□□□□□ -1.26
VPS33A-203ENST00000536212 POGKQ9P215 609 aa7.19□□□□□ -1.26
VPS33A-203ENST00000536212 POLKQ9UBT6 870 aa7.19□□□□□ -1.26
VPS33A-203ENST00000536212 NCOA3Q9Y6Q9 1424 aa7.18□□□□□ -1.26
VPS33A-203ENST00000536212 LRRC7Q96NW7 1537 aa7.18□□□□□ -1.26
VPS33A-203ENST00000536212 WNT7AO00755 349 aa7.18□□□□□ -1.26
VPS33A-203ENST00000536212 VAMP4O75379 141 aa7.18□□□□□ -1.26
VPS33A-203ENST00000536212 LORP23490 312 aaPredicted RBP7.18□□□□□ -1.26
VPS33A-203ENST00000536212 DDIT3P35638 169 aa7.18□□□□□ -1.26
VPS33A-203ENST00000536212 CALD1Q05682 793 aaKnown RBP7.18□□□□□ -1.26
VPS33A-203ENST00000536212 SAFB2Q14151 953 aaKnown RBP eCLIP7.18□□□□□ -1.26
VPS33A-203ENST00000536212 NFE2L2Q16236 605 aa7.18□□□□□ -1.26
VPS33A-203ENST00000536212 AEBP1Q8IUX7 1158 aa7.18□□□□□ -1.26
VPS33A-203ENST00000536212 SNIP1Q8TAD8 396 aaKnown RBP7.18□□□□□ -1.26
VPS33A-203ENST00000536212 CABLES1Q8TDN4 633 aa7.18□□□□□ -1.26
VPS33A-203ENST00000536212 SIRT1Q96EB6 747 aa7.18□□□□□ -1.26
VPS33A-203ENST00000536212 THAP11Q96EK4 314 aa7.18□□□□□ -1.26
VPS33A-203ENST00000536212 PKNOX2Q96KN3 472 aa7.18□□□□□ -1.26
VPS33A-203ENST00000536212 CABP1Q9NZU7 370 aa7.18□□□□□ -1.26
VPS33A-203ENST00000536212 CHMP5Q9NZZ3 219 aa7.18□□□□□ -1.26
VPS33A-203ENST00000536212 KIF24Q5T7B8 1368 aa7.18□□□□□ -1.26
VPS33A-203ENST00000536212 A2ML1A8K2U0 1454 aa7.17□□□□□ -1.26
VPS33A-203ENST00000536212 CDK12Q9NYV4 1490 aaPredicted RBP7.17□□□□□ -1.26
VPS33A-203ENST00000536212 CFAP65Q6ZU64 1925 aaKnown RBP7.17□□□□□ -1.26
VPS33A-203ENST00000536212 SPATA31D1Q6ZQQ2 1576 aa7.17□□□□□ -1.26
VPS33A-203ENST00000536212 FSD2A1L4K1 749 aa7.17□□□□□ -1.26
VPS33A-203ENST00000536212 SOCS7O14512 581 aa7.17□□□□□ -1.26
VPS33A-203ENST00000536212 ZBTB7BO15156 539 aaPredicted RBP7.17□□□□□ -1.26
VPS33A-203ENST00000536212 AP1G2O75843 785 aa7.17□□□□□ -1.26
VPS33A-203ENST00000536212 PRKAR2BP31323 418 aa7.17□□□□□ -1.26
VPS33A-203ENST00000536212 MCM4P33991 863 aa7.17□□□□□ -1.26
VPS33A-203ENST00000536212 IL13P35225 146 aa7.17□□□□□ -1.26
VPS33A-203ENST00000536212 GRIPAP1Q4V328 841 aa7.17□□□□□ -1.26
VPS33A-203ENST00000536212 L1TD1Q5T7N2 865 aaKnown RBP7.17□□□□□ -1.26
VPS33A-203ENST00000536212 CHD1LQ86WJ1 897 aa7.17□□□□□ -1.26
VPS33A-203ENST00000536212 FAM43AQ8N2R8 423 aa7.17□□□□□ -1.26
VPS33A-203ENST00000536212 MTMR14Q8NCE2 650 aa7.17□□□□□ -1.26
VPS33A-203ENST00000536212 SLC16A10Q8TF71 515 aa7.17□□□□□ -1.26
VPS33A-203ENST00000536212 TRAIPQ9BWF2 469 aa7.17□□□□□ -1.26
VPS33A-203ENST00000536212 SLKQ9H2G2 1235 aaPredicted RBP7.17□□□□□ -1.26
VPS33A-203ENST00000536212 IFT57Q9NWB7 429 aa7.17□□□□□ -1.26
VPS33A-203ENST00000536212 KIF20BQ96Q89 1820 aa7.17□□□□□ -1.26
VPS33A-203ENST00000536212 EDC4Q6P2E9 1401 aaKnown RBP7.17□□□□□ -1.26
VPS33A-203ENST00000536212 MFAP1P55081 439 aaKnown RBP7.16□□□□□ -1.26
VPS33A-203ENST00000536212 BMP2KLQ5H9B9 411 aa7.16□□□□□ -1.26
VPS33A-203ENST00000536212 FNBP4Q8N3X1 1017 aaPredicted RBP7.16□□□□□ -1.26
VPS33A-203ENST00000536212 FAM160A2Q8N612 972 aaPredicted RBP7.16□□□□□ -1.26
VPS33A-203ENST00000536212 ZSCAN1Q8NBB4 408 aa7.16□□□□□ -1.26
VPS33A-203ENST00000536212 GCC1Q96CN9 775 aa7.16□□□□□ -1.26
VPS33A-203ENST00000536212 PRM3Q9NNZ6 103 aa7.16□□□□□ -1.26
VPS33A-203ENST00000536212 ABCC4O15439 1325 aa7.16□□□□□ -1.26
VPS33A-203ENST00000536212 RIMS2Q9UQ26 1411 aa7.16□□□□□ -1.26
VPS33A-203ENST00000536212 SETD1AO15047 1707 aaKnown RBP7.15□□□□□ -1.26
VPS33A-203ENST00000536212 MYO5BQ9ULV0 1848 aa7.15□□□□□ -1.26
VPS33A-203ENST00000536212 GNAI1P63096 354 aa7.15□□□□□ -1.26
VPS33A-203ENST00000536212 GUCA2AQ02747 115 aa7.15□□□□□ -1.26
VPS33A-203ENST00000536212 LMOD3Q0VAK6 560 aa7.15□□□□□ -1.26
VPS33A-203ENST00000536212 MORN1Q5T089 497 aa7.15□□□□□ -1.26
VPS33A-203ENST00000536212 HLA-CQ95604 372 aa7.15□□□□□ -1.26
VPS33A-203ENST00000536212 PCDHGC3Q9UN70 934 aa7.15□□□□□ -1.26
VPS33A-203ENST00000536212 TECPR2O15040 1411 aa7.15□□□□□ -1.27
VPS33A-203ENST00000536212 RIMBP3CA6NJZ7 1639 aa7.14□□□□□ -1.27
VPS33A-203ENST00000536212 RIMBP3BA6NNM3 1639 aa7.14□□□□□ -1.27
VPS33A-203ENST00000536212 WASLO00401 505 aaPredicted RBP7.14□□□□□ -1.27
VPS33A-203ENST00000536212 ZBTB24O43167 697 aaPredicted RBP7.14□□□□□ -1.27
VPS33A-203ENST00000536212 USP17L8P0C7I0 530 aa7.14□□□□□ -1.27
VPS33A-203ENST00000536212 FUT2Q10981 343 aa7.14□□□□□ -1.27
VPS33A-203ENST00000536212 MTMR2Q13614 643 aa7.14□□□□□ -1.27
VPS33A-203ENST00000536212 HSCBQ8IWL3 235 aa7.14□□□□□ -1.27
VPS33A-203ENST00000536212 PHACTR3Q96KR7 559 aa7.14□□□□□ -1.27
VPS33A-203ENST00000536212 API5Q9BZZ5 524 aaKnown RBP7.14□□□□□ -1.27
VPS33A-203ENST00000536212 RIMBP3Q9UFD9 1639 aa7.14□□□□□ -1.27
VPS33A-203ENST00000536212 J3QL48 77 aa7.13□□□□□ -1.27
VPS33A-203ENST00000536212 FMNL1O95466 1100 aaPredicted RBP7.13□□□□□ -1.27
VPS33A-203ENST00000536212 GMPRP36959 345 aa7.13□□□□□ -1.27
VPS33A-203ENST00000536212 SUZ12Q15022 739 aaKnown RBP7.13□□□□□ -1.27
VPS33A-203ENST00000536212 WAPLQ7Z5K2 1190 aa7.13□□□□□ -1.27
VPS33A-203ENST00000536212 NPAS3Q8IXF0 933 aa7.13□□□□□ -1.27
VPS33A-203ENST00000536212 SIRT2Q8IXJ6 389 aa7.13□□□□□ -1.27
VPS33A-203ENST00000536212 TSPYL6Q8N831 410 aa7.13□□□□□ -1.27
VPS33A-203ENST00000536212 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.13□□□□□ -1.27
VPS33A-203ENST00000536212 KIF2CQ99661 725 aa7.13□□□□□ -1.27
VPS33A-203ENST00000536212 LNPKQ9C0E8 428 aa7.13□□□□□ -1.27
VPS33A-203ENST00000536212 MBIPQ9NS73 344 aa7.13□□□□□ -1.27
VPS33A-203ENST00000536212 NXF1Q9UBU9 619 aaKnown RBP7.13□□□□□ -1.27
VPS33A-203ENST00000536212 ISY1Q9ULR0 285 aaKnown RBP7.13□□□□□ -1.27
VPS33A-203ENST00000536212 NRXN3Q9Y4C0 1643 aa7.12□□□□□ -1.27
VPS33A-203ENST00000536212 C6orf229H3BNL8 230 aa7.12□□□□□ -1.27
VPS33A-203ENST00000536212 ATP6V1AP38606 617 aa7.12□□□□□ -1.27
VPS33A-203ENST00000536212 GLIPR1L2Q4G1C9 344 aa7.12□□□□□ -1.27
VPS33A-203ENST00000536212 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.12□□□□□ -1.27
VPS33A-203ENST00000536212 HELBQ8NG08 1087 aaPredicted RBP7.12□□□□□ -1.27
VPS33A-203ENST00000536212 GDPD2Q9HCC8 539 aa7.12□□□□□ -1.27
VPS33A-203ENST00000536212 KNDC1Q76NI1 1749 aa7.12□□□□□ -1.27
VPS33A-203ENST00000536212 CPS1P31327 1500 aa7.11□□□□□ -1.27
VPS33A-203ENST00000536212 HMOX1P09601 288 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms