RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 KIAA0586Q9BVV6 1533 aa7.23□□□□□ -1.25
YBX3-205ENST00000536107 SELPP16109 830 aa7.23□□□□□ -1.25
YBX3-205ENST00000536107 YBX3P16989 372 aaKnown RBP eCLIP7.23□□□□□ -1.251e-6■□□□□ 9.9
YBX3-205ENST00000536107 ZNF295-AS1Q8N0V1 137 aa7.23□□□□□ -1.25
YBX3-205ENST00000536107 YEATS2Q9ULM3 1422 aa7.23□□□□□ -1.25
YBX3-205ENST00000536107 ADAMTSL3P82987 1691 aa7.22□□□□□ -1.25
YBX3-205ENST00000536107 TNIKQ9UKE5 1360 aa7.22□□□□□ -1.25
YBX3-205ENST00000536107 WRNQ14191 1432 aaPredicted RBP eCLIP7.22□□□□□ -1.25
YBX3-205ENST00000536107 GPR37L1O60883 481 aa7.22□□□□□ -1.25
YBX3-205ENST00000536107 ALBP02768 609 aa7.22□□□□□ -1.25
YBX3-205ENST00000536107 INHAP05111 366 aa7.22□□□□□ -1.25
YBX3-205ENST00000536107 NRG1Q02297 640 aaPredicted RBP7.22□□□□□ -1.25
YBX3-205ENST00000536107 LENG1Q96BZ8 264 aaPredicted RBP7.22□□□□□ -1.25
YBX3-205ENST00000536107 FMNL2Q96PY5 1086 aa7.22□□□□□ -1.25
YBX3-205ENST00000536107 RNF112Q9ULX5 631 aa7.22□□□□□ -1.25
YBX3-205ENST00000536107 MAP3K4Q9Y6R4 1608 aa7.22□□□□□ -1.25
YBX3-205ENST00000536107 RAPGEF3O95398 923 aa7.21□□□□□ -1.26
YBX3-205ENST00000536107 SCNN1DP51172 638 aa7.21□□□□□ -1.26
YBX3-205ENST00000536107 SMTNP53814 917 aa7.21□□□□□ -1.26
YBX3-205ENST00000536107 MLECQ14165 292 aa7.21□□□□□ -1.26
YBX3-205ENST00000536107 C8orf86Q6ZUL3 223 aa7.21□□□□□ -1.26
YBX3-205ENST00000536107 TP53INP1Q96A56 240 aa7.21□□□□□ -1.26
YBX3-205ENST00000536107 SIRT1Q96EB6 747 aa7.21□□□□□ -1.26
YBX3-205ENST00000536107 MADDQ8WXG6 1647 aa7.2□□□□□ -1.26
YBX3-205ENST00000536107 CARMIL2Q6F5E8 1435 aa7.2□□□□□ -1.26
YBX3-205ENST00000536107 HSPA1LP34931 641 aa7.2□□□□□ -1.26
YBX3-205ENST00000536107 GDF10P55107 478 aa7.2□□□□□ -1.26
YBX3-205ENST00000536107 PIP4K2BP78356 416 aa7.2□□□□□ -1.26
YBX3-205ENST00000536107 SSBP4Q9BWG4 385 aaPredicted RBP7.2□□□□□ -1.26
YBX3-205ENST00000536107 GPBP1L1Q9HC44 474 aaPredicted RBP7.2□□□□□ -1.26
YBX3-205ENST00000536107 DOLKQ9UPQ8 538 aa7.2□□□□□ -1.26
YBX3-205ENST00000536107 RUSC2Q8N2Y8 1516 aa7.2□□□□□ -1.26
YBX3-205ENST00000536107 UACAQ9BZF9 1416 aa7.19□□□□□ -1.26
YBX3-205ENST00000536107 TRAPPC3LQ5T215 181 aa7.19□□□□□ -1.26
YBX3-205ENST00000536107 C20orf204Q6ZNR8 217 aa7.19□□□□□ -1.26
YBX3-205ENST00000536107 PHTF2Q8N3S3 785 aa7.19□□□□□ -1.26
YBX3-205ENST00000536107 GOPCQ9HD26 462 aa7.19□□□□□ -1.26
YBX3-205ENST00000536107 ERICH3Q5RHP9 1530 aa7.18□□□□□ -1.26
YBX3-205ENST00000536107 MED1Q15648 1581 aaPredicted RBP7.18□□□□□ -1.26
YBX3-205ENST00000536107 ADH7P40394 386 aa7.18□□□□□ -1.26
YBX3-205ENST00000536107 TSGA10IPQ3SY00 556 aa7.18□□□□□ -1.26
YBX3-205ENST00000536107 IQSEC3Q9UPP2 1182 aaPredicted RBP7.18□□□□□ -1.26
YBX3-205ENST00000536107 MAGI3Q5TCQ9 1506 aa7.17□□□□□ -1.26
YBX3-205ENST00000536107 CUL7Q14999 1698 aa7.17□□□□□ -1.26
YBX3-205ENST00000536107 A0A0A0MRY4 1105 aa7.17□□□□□ -1.26
YBX3-205ENST00000536107 CDK2AP1O14519 115 aa7.17□□□□□ -1.26
YBX3-205ENST00000536107 MTFR1Q15390 333 aa7.17□□□□□ -1.26
YBX3-205ENST00000536107 BICDL1Q6ZP65 573 aa7.17□□□□□ -1.26
YBX3-205ENST00000536107 UHRF1BP1LA0JNW5 1464 aa7.17□□□□□ -1.26
YBX3-205ENST00000536107 SLC4A9Q96Q91 983 aa7.16□□□□□ -1.26
YBX3-205ENST00000536107 CHIC2Q9UKJ5 165 aa7.16□□□□□ -1.26
YBX3-205ENST00000536107 NDUFB9Q9Y6M9 179 aa7.16□□□□□ -1.26
YBX3-205ENST00000536107 POGZQ7Z3K3 1410 aa7.16□□□□□ -1.26
YBX3-205ENST00000536107 WDR7Q9Y4E6 1490 aa7.16□□□□□ -1.26
YBX3-205ENST00000536107 RIMS1Q86UR5 1692 aaKnown RBP7.16□□□□□ -1.26
YBX3-205ENST00000536107 LILRB5O75023 590 aa7.15□□□□□ -1.26
YBX3-205ENST00000536107 RAC1P63000 192 aa7.15□□□□□ -1.26
YBX3-205ENST00000536107 PCMTD1Q96MG8 357 aaPredicted RBP7.15□□□□□ -1.26
YBX3-205ENST00000536107 SLC30A3Q99726 388 aa7.15□□□□□ -1.26
YBX3-205ENST00000536107 IQSEC2Q5JU85 1478 aa7.15□□□□□ -1.27
YBX3-205ENST00000536107 BCORL1Q5H9F3 1711 aa7.15□□□□□ -1.27
YBX3-205ENST00000536107 A6NJY4 79 aa7.14□□□□□ -1.27
YBX3-205ENST00000536107 PTPRTO14522 1441 aa7.14□□□□□ -1.27
YBX3-205ENST00000536107 CEBPAP49715 358 aaPredicted RBP7.14□□□□□ -1.27
YBX3-205ENST00000536107 NEUROD1Q13562 356 aa7.14□□□□□ -1.27
YBX3-205ENST00000536107 OXLD1Q5BKU9 147 aa7.14□□□□□ -1.27
YBX3-205ENST00000536107 SHISA2Q6UWI4 295 aa7.14□□□□□ -1.27
YBX3-205ENST00000536107 CABP1Q9NZU7 370 aa7.14□□□□□ -1.27
YBX3-205ENST00000536107 KDM5BQ9UGL1 1544 aa7.14□□□□□ -1.27
YBX3-205ENST00000536107 ARAP3Q8WWN8 1544 aa7.13□□□□□ -1.27
YBX3-205ENST00000536107 SLFNL1Q499Z3 407 aa7.13□□□□□ -1.27
YBX3-205ENST00000536107 USP3Q9Y6I4 520 aa7.13□□□□□ -1.27
YBX3-205ENST00000536107 SPEM2Q0P670 501 aa7.12□□□□□ -1.27
YBX3-205ENST00000536107 SFSWAPQ12872 951 aaKnown RBP7.12□□□□□ -1.27
YBX3-205ENST00000536107 PCMTD2Q9NV79 361 aa7.12□□□□□ -1.27
YBX3-205ENST00000536107 SERTAD1Q9UHV2 236 aa7.12□□□□□ -1.27
YBX3-205ENST00000536107 USP21Q9UK80 565 aa7.12□□□□□ -1.27
YBX3-205ENST00000536107 GPC6Q9Y625 555 aaPredicted RBP7.12□□□□□ -1.27
YBX3-205ENST00000536107 UHRF1BP1Q6BDS2 1440 aa7.11□□□□□ -1.27
YBX3-205ENST00000536107 TMEM229AB2RXF0 380 aa7.11□□□□□ -1.27
YBX3-205ENST00000536107 TOM1O60784 492 aa7.11□□□□□ -1.27
YBX3-205ENST00000536107 TXLNAP40222 546 aa7.11□□□□□ -1.27
YBX3-205ENST00000536107 LRRC69Q6ZNQ3 347 aa7.11□□□□□ -1.27
YBX3-205ENST00000536107 PHLDB1Q86UU1 1377 aa7.1□□□□□ -1.27
YBX3-205ENST00000536107 LTBP4Q8N2S1 1624 aa7.1□□□□□ -1.27
YBX3-205ENST00000536107 IRAK1P51617 712 aa7.1□□□□□ -1.27
YBX3-205ENST00000536107 SLC51AQ86UW1 340 aa7.1□□□□□ -1.27
YBX3-205ENST00000536107 FMR1NBQ8N0W7 255 aaPredicted RBP7.1□□□□□ -1.27
YBX3-205ENST00000536107 BANK1Q8NDB2 785 aa7.1□□□□□ -1.27
YBX3-205ENST00000536107 CFAP43Q8NDM7 1665 aa7.09□□□□□ -1.27
YBX3-205ENST00000536107 ZNF335Q9H4Z2 1342 aaPredicted RBP7.09□□□□□ -1.27
YBX3-205ENST00000536107 ARID3CA6NKF2 412 aa7.09□□□□□ -1.27
YBX3-205ENST00000536107 APBB1O00213 710 aa7.09□□□□□ -1.27
YBX3-205ENST00000536107 EML1O00423 815 aa7.09□□□□□ -1.27
YBX3-205ENST00000536107 EIF4G2P78344 907 aaKnown RBP eCLIP7.09□□□□□ -1.27
YBX3-205ENST00000536107 FZD5Q13467 585 aa7.09□□□□□ -1.27
YBX3-205ENST00000536107 MTMR14Q8NCE2 650 aa7.09□□□□□ -1.27
YBX3-205ENST00000536107 PARP3Q9Y6F1 533 aa7.09□□□□□ -1.27
YBX3-205ENST00000536107 ZCCHC11Q5TAX3 1644 aaKnown RBP7.09□□□□□ -1.28
YBX3-205ENST00000536107 C7orf43Q8WVR3 580 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms