RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 SLC39A6Q13433 755 aa19.21■□□□□ 0.67
CHMP1A-202ENST00000535997 FAM184AQ8NB25 1140 aa19.21■□□□□ 0.67
CHMP1A-202ENST00000535997 NFATC2IPQ8NCF5 419 aa19.21■□□□□ 0.67
CHMP1A-202ENST00000535997 METTL22Q9BUU2 404 aaPredicted RBP19.21■□□□□ 0.67
CHMP1A-202ENST00000535997 ZNF500O60304 480 aaPredicted RBP19.2■□□□□ 0.66
CHMP1A-202ENST00000535997 OFD1O75665 1012 aa19.2■□□□□ 0.66
CHMP1A-202ENST00000535997 ZC3H6P61129 1189 aaKnown RBP19.2■□□□□ 0.66
CHMP1A-202ENST00000535997 CREB3L3Q68CJ9 461 aa19.2■□□□□ 0.66
CHMP1A-202ENST00000535997 CNPY2Q9Y2B0 182 aa19.2■□□□□ 0.66
CHMP1A-202ENST00000535997 RBM8AQ9Y5S9 174 aaKnown RBP19.2■□□□□ 0.66
CHMP1A-202ENST00000535997 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.2■□□□□ 0.66
CHMP1A-202ENST00000535997 PHKG2P15735 406 aa19.2■□□□□ 0.66
CHMP1A-202ENST00000535997 TATP17735 454 aaPredicted RBP19.2■□□□□ 0.66
CHMP1A-202ENST00000535997 GJB2P29033 226 aa19.2■□□□□ 0.66
CHMP1A-202ENST00000535997 NMIQ13287 307 aaPredicted RBP19.2■□□□□ 0.66
CHMP1A-202ENST00000535997 CSPP1Q1MSJ5 1256 aa19.2■□□□□ 0.66
CHMP1A-202ENST00000535997 RNF214Q8ND24 703 aa19.2■□□□□ 0.66
CHMP1A-202ENST00000535997 FAM227BQ96M60 508 aa19.2■□□□□ 0.66
CHMP1A-202ENST00000535997 C1orf167Q5SNV9 1468 aa19.19■□□□□ 0.66
CHMP1A-202ENST00000535997 LARGE1O95461 756 aa19.19■□□□□ 0.66
CHMP1A-202ENST00000535997 KCNJ4P48050 445 aa19.19■□□□□ 0.66
CHMP1A-202ENST00000535997 CCDC183Q5T5S1 534 aa19.19■□□□□ 0.66
CHMP1A-202ENST00000535997 COPS6Q7L5N1 327 aa19.19■□□□□ 0.66
CHMP1A-202ENST00000535997 CCDC83Q8IWF9 413 aa19.19■□□□□ 0.66
CHMP1A-202ENST00000535997 XAGE3Q8WTP9 111 aa19.19■□□□□ 0.66
CHMP1A-202ENST00000535997 NLRP2Q9NX02 1062 aa19.19■□□□□ 0.66
CHMP1A-202ENST00000535997 CCDC39Q9UFE4 941 aa19.19■□□□□ 0.66
CHMP1A-202ENST00000535997 MYL6BP14649 208 aa19.18■□□□□ 0.66
CHMP1A-202ENST00000535997 UVSSAQ2YD98 709 aa19.18■□□□□ 0.66
CHMP1A-202ENST00000535997 RNF20Q5VTR2 975 aa19.18■□□□□ 0.66
CHMP1A-202ENST00000535997 ANKRD13DQ6ZTN6 518 aa19.18■□□□□ 0.66
CHMP1A-202ENST00000535997 RGPD5Q99666 1765 aa19.18■□□□□ 0.66
CHMP1A-202ENST00000535997 IFNL2Q8IZJ0 200 aa19.18■□□□□ 0.66
CHMP1A-202ENST00000535997 BOLA2Q9H3K6 86 aa19.18■□□□□ 0.66
CHMP1A-202ENST00000535997 KIF1AQ12756 1690 aa19.18■□□□□ 0.66
CHMP1A-202ENST00000535997 SNRPA1P09661 255 aaKnown RBP19.17■□□□□ 0.66
CHMP1A-202ENST00000535997 ME3Q16798 604 aa19.17■□□□□ 0.66
CHMP1A-202ENST00000535997 SIL1Q9H173 461 aa19.17■□□□□ 0.66
CHMP1A-202ENST00000535997 ALDH8A1Q9H2A2 487 aaPredicted RBP19.17■□□□□ 0.66
CHMP1A-202ENST00000535997 COPRSQ9NQ92 184 aa19.17■□□□□ 0.66
CHMP1A-202ENST00000535997 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.17■□□□□ 0.66
CHMP1A-202ENST00000535997 MTMR6Q9Y217 621 aa19.17■□□□□ 0.66
CHMP1A-202ENST00000535997 ZKSCAN5Q9Y2L8 839 aa19.17■□□□□ 0.66
CHMP1A-202ENST00000535997 KDM6AO15550 1401 aaPredicted RBP19.17■□□□□ 0.66
CHMP1A-202ENST00000535997 SLC27A2O14975 620 aa19.17■□□□□ 0.66
CHMP1A-202ENST00000535997 ZNF496Q96IT1 587 aaPredicted RBP19.17■□□□□ 0.66
CHMP1A-202ENST00000535997 FSD1Q9BTV5 496 aa19.17■□□□□ 0.66
CHMP1A-202ENST00000535997 TLR7Q9NYK1 1049 aaKnown RBP19.17■□□□□ 0.66
CHMP1A-202ENST00000535997 SCN11AQ9UI33 1791 aa19.17■□□□□ 0.66
CHMP1A-202ENST00000535997 ANKRD1Q15327 319 aa19.16■□□□□ 0.66
CHMP1A-202ENST00000535997 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.16■□□□□ 0.66
CHMP1A-202ENST00000535997 MYD88Q99836 296 aa19.16■□□□□ 0.66
CHMP1A-202ENST00000535997 PLEKHG2Q9H7P9 1386 aa19.16■□□□□ 0.66
CHMP1A-202ENST00000535997 TSGA10IPQ3SY00 556 aa19.16■□□□□ 0.66
CHMP1A-202ENST00000535997 TPM2P07951 284 aa19.15■□□□□ 0.66
CHMP1A-202ENST00000535997 ADAMTSL3P82987 1691 aa19.15■□□□□ 0.66
CHMP1A-202ENST00000535997 EPHA10Q5JZY3 1008 aa19.15■□□□□ 0.66
CHMP1A-202ENST00000535997 LRP10Q7Z4F1 713 aa19.15■□□□□ 0.66
CHMP1A-202ENST00000535997 DCAF5Q96JK2 942 aa19.15■□□□□ 0.66
CHMP1A-202ENST00000535997 A0A0D9SFI3 127 aa19.14■□□□□ 0.66
CHMP1A-202ENST00000535997 TERF1P54274 439 aa19.14■□□□□ 0.66
CHMP1A-202ENST00000535997 TTC5Q8N0Z6 440 aa19.14■□□□□ 0.66
CHMP1A-202ENST00000535997 KLHDC4Q8TBB5 520 aa19.14■□□□□ 0.66
CHMP1A-202ENST00000535997 HMG20BQ9P0W2 317 aa19.14■□□□□ 0.66
CHMP1A-202ENST00000535997 TPCN1Q9ULQ1 816 aa19.14■□□□□ 0.66
CHMP1A-202ENST00000535997 USP16Q9Y5T5 823 aa19.14■□□□□ 0.65
CHMP1A-202ENST00000535997 MRC1P22897 1456 aa19.14■□□□□ 0.65
CHMP1A-202ENST00000535997 COL15A1P39059 1388 aa19.13■□□□□ 0.65
CHMP1A-202ENST00000535997 MED23Q9ULK4 1368 aa19.13■□□□□ 0.65
CHMP1A-202ENST00000535997 ATP5JP18859 108 aa19.13■□□□□ 0.65
CHMP1A-202ENST00000535997 BLOC1S2Q6QNY1 142 aa19.13■□□□□ 0.65
CHMP1A-202ENST00000535997 ALS2Q96Q42 1657 aa19.13■□□□□ 0.65
CHMP1A-202ENST00000535997 PDCP20941 246 aa19.13■□□□□ 0.65
CHMP1A-202ENST00000535997 ST3GAL1Q11201 340 aa19.13■□□□□ 0.65
CHMP1A-202ENST00000535997 RABL6Q3YEC7 729 aaPredicted RBP19.13■□□□□ 0.65
CHMP1A-202ENST00000535997 FMNL2Q96PY5 1086 aa19.13■□□□□ 0.65
CHMP1A-202ENST00000535997 FIBPO43427 364 aa19.12■□□□□ 0.65
CHMP1A-202ENST00000535997 RFX5P48382 616 aaPredicted RBP19.12■□□□□ 0.65
CHMP1A-202ENST00000535997 DNM1Q05193 864 aaKnown RBP19.12■□□□□ 0.65
CHMP1A-202ENST00000535997 PTPN12Q05209 780 aaKnown RBP19.12■□□□□ 0.65
CHMP1A-202ENST00000535997 LARP1BQ659C4 914 aaKnown RBP19.12■□□□□ 0.65
CHMP1A-202ENST00000535997 NECAB1Q8N987 351 aa19.12■□□□□ 0.65
CHMP1A-202ENST00000535997 C5P01031 1676 aa19.12■□□□□ 0.65
CHMP1A-202ENST00000535997 JCADQ9P266 1359 aa19.11■□□□□ 0.65
CHMP1A-202ENST00000535997 ABCC6O95255 1503 aa19.11■□□□□ 0.65
CHMP1A-202ENST00000535997 TAF5LO75529 589 aa19.11■□□□□ 0.65
CHMP1A-202ENST00000535997 RPS6KB1P23443 525 aa19.11■□□□□ 0.65
CHMP1A-202ENST00000535997 USPL1Q5W0Q7 1092 aa19.11■□□□□ 0.65
CHMP1A-202ENST00000535997 DDX54Q8TDD1 881 aaKnown RBP19.11■□□□□ 0.65
CHMP1A-202ENST00000535997 ATF3P18847 181 aa19.11■□□□□ 0.65
CHMP1A-202ENST00000535997 TNNI3KQ59H18 835 aa19.11■□□□□ 0.65
CHMP1A-202ENST00000535997 FPGT-TNNI3KV9GXZ4 949 aa19.11■□□□□ 0.65
CHMP1A-202ENST00000535997 VPS37CA5D8V6 355 aaPredicted RBP19.1■□□□□ 0.65
CHMP1A-202ENST00000535997 CSB-PGBD3P0DP91 1061 aa19.1■□□□□ 0.65
CHMP1A-202ENST00000535997 KRT32Q14532 448 aa19.1■□□□□ 0.65
CHMP1A-202ENST00000535997 DBNLQ9UJU6 430 aaKnown RBP19.1■□□□□ 0.65
CHMP1A-202ENST00000535997 CYP27B1O15528 508 aa19.09■□□□□ 0.65
CHMP1A-202ENST00000535997 MEGF6O75095 1541 aa19.09■□□□□ 0.65
CHMP1A-202ENST00000535997 ZNF589Q86UQ0 364 aaPredicted RBP19.09■□□□□ 0.65
CHMP1A-202ENST00000535997 TFCP2Q12800 502 aa19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms