RNA–Protein interactions for RNA: ENST00000535936.1

PAAF1-206, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 383 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-206ENST00000535936 SCN7AQ01118 1682 aa12.03□□□□□ -0.48
PAAF1-206ENST00000535936 FAM177BA6PVY3 158 aa12.03□□□□□ -0.48
PAAF1-206ENST00000535936 MAP3K13O43283 966 aa12.03□□□□□ -0.48
PAAF1-206ENST00000535936 LMOD1P29536 600 aaPredicted RBP12.03□□□□□ -0.48
PAAF1-206ENST00000535936 PPP2R1AP30153 589 aa12.03□□□□□ -0.48
PAAF1-206ENST00000535936 EIF6P56537 245 aaKnown RBP12.03□□□□□ -0.48
PAAF1-206ENST00000535936 RPGRQ92834 1020 aaKnown RBP12.03□□□□□ -0.48
PAAF1-206ENST00000535936 FAM212AQ96EL1 285 aa12.03□□□□□ -0.48
PAAF1-206ENST00000535936 HACL1Q9UJ83 578 aa12.03□□□□□ -0.48
PAAF1-206ENST00000535936 ERVV-1B6SEH8 477 aa12.02□□□□□ -0.49
PAAF1-206ENST00000535936 KCNQ3O43525 872 aa12.02□□□□□ -0.49
PAAF1-206ENST00000535936 EAPPQ56P03 285 aaPredicted RBP12.02□□□□□ -0.49
PAAF1-206ENST00000535936 L3MBTL3Q96JM7 780 aaPredicted RBP12.02□□□□□ -0.49
PAAF1-206ENST00000535936 TIAM2Q8IVF5 1701 aa12.01□□□□□ -0.49
PAAF1-206ENST00000535936 IARSP41252 1262 aaKnown RBP12.01□□□□□ -0.49
PAAF1-206ENST00000535936 PRELPP51888 382 aa12.01□□□□□ -0.49
PAAF1-206ENST00000535936 COL13A1Q5TAT6 717 aaPredicted RBP12.01□□□□□ -0.49
PAAF1-206ENST00000535936 PPP1R42Q7Z4L9 355 aa12.01□□□□□ -0.49
PAAF1-206ENST00000535936 KLRG2A4D1S0 409 aaPredicted RBP12□□□□□ -0.49
PAAF1-206ENST00000535936 TMEM88BA6NKF7 163 aa12□□□□□ -0.49
PAAF1-206ENST00000535936 POTECB2RU33 542 aa12□□□□□ -0.49
PAAF1-206ENST00000535936 PIP4K2AP48426 406 aaPredicted RBP12□□□□□ -0.49
PAAF1-206ENST00000535936 NGEFQ8N5V2 710 aa12□□□□□ -0.49
PAAF1-206ENST00000535936 RBM17Q96I25 401 aaKnown RBP12□□□□□ -0.49
PAAF1-206ENST00000535936 TAF1DQ9H5J8 278 aaPredicted RBP12□□□□□ -0.49
PAAF1-206ENST00000535936 ERBB4Q15303 1308 aa12□□□□□ -0.49
PAAF1-206ENST00000535936 EPHX2P34913 555 aa11.99□□□□□ -0.49
PAAF1-206ENST00000535936 LMOD3Q0VAK6 560 aa11.99□□□□□ -0.49
PAAF1-206ENST00000535936 DCTN1Q14203 1278 aa11.99□□□□□ -0.49
PAAF1-206ENST00000535936 PARP10Q53GL7 1025 aa11.99□□□□□ -0.49
PAAF1-206ENST00000535936 LHX8Q68G74 356 aa11.99□□□□□ -0.49
PAAF1-206ENST00000535936 GPC2Q8N158 579 aa11.99□□□□□ -0.49
PAAF1-206ENST00000535936 SYNE4Q8N205 404 aa11.99□□□□□ -0.49
PAAF1-206ENST00000535936 PSMD1Q99460 953 aa11.99□□□□□ -0.49
PAAF1-206ENST00000535936 ZNF277Q9NRM2 450 aaPredicted RBP11.99□□□□□ -0.49
PAAF1-206ENST00000535936 MKRN1Q9UHC7 482 aaKnown RBP11.99□□□□□ -0.49
PAAF1-206ENST00000535936 RRP7AQ9Y3A4 280 aaKnown RBP11.99□□□□□ -0.49
PAAF1-206ENST00000535936 CCDC88AQ3V6T2 1871 aa11.99□□□□□ -0.49
PAAF1-206ENST00000535936 MAP3K15Q6ZN16 1313 aa11.98□□□□□ -0.49
PAAF1-206ENST00000535936 ASTLQ6HA08 431 aaPredicted RBP11.98□□□□□ -0.49
PAAF1-206ENST00000535936 SUPT20HQ8NEM7 779 aa11.98□□□□□ -0.49
PAAF1-206ENST00000535936 NLRP3Q96P20 1036 aa11.98□□□□□ -0.49
PAAF1-206ENST00000535936 BEGAINQ9BUH8 593 aa11.98□□□□□ -0.49
PAAF1-206ENST00000535936 DICER1Q9UPY3 1922 aaKnown RBP11.98□□□□□ -0.49
PAAF1-206ENST00000535936 FER1L6Q2WGJ9 1857 aa11.97□□□□□ -0.49
PAAF1-206ENST00000535936 SIPA1L3O60292 1781 aaPredicted RBP11.97□□□□□ -0.49
PAAF1-206ENST00000535936 CEP350Q5VT06 3117 aa11.97□□□□□ -0.49
PAAF1-206ENST00000535936 PRAMEF22A3QJZ6 481 aa11.97□□□□□ -0.49
PAAF1-206ENST00000535936 NBPF26B4DH59 902 aa11.97□□□□□ -0.49
PAAF1-206ENST00000535936 CTCFP49711 727 aaPredicted RBP11.97□□□□□ -0.49
PAAF1-206ENST00000535936 NFE2L2Q16236 605 aa11.97□□□□□ -0.49
PAAF1-206ENST00000535936 HSP90AB3PQ58FF7 597 aa11.97□□□□□ -0.49
PAAF1-206ENST00000535936 NBPF10Q6P3W6 841 aaKnown RBP11.97□□□□□ -0.49
PAAF1-206ENST00000535936 IFNLR1Q8IU57 520 aaPredicted RBP11.97□□□□□ -0.49
PAAF1-206ENST00000535936 NIM1KQ8IY84 436 aa11.97□□□□□ -0.49
PAAF1-206ENST00000535936 LARGE2Q8N3Y3 721 aa11.97□□□□□ -0.49
PAAF1-206ENST00000535936 NBPF15Q8N660 670 aa11.97□□□□□ -0.49
PAAF1-206ENST00000535936 C7orf43Q8WVR3 580 aa11.97□□□□□ -0.49
PAAF1-206ENST00000535936 VPS33BQ9H267 617 aa11.97□□□□□ -0.49
PAAF1-206ENST00000535936 ANKRD31Q8N7Z5 1873 aa11.97□□□□□ -0.49
PAAF1-206ENST00000535936 CNTNAP1P78357 1384 aa11.96□□□□□ -0.49
PAAF1-206ENST00000535936 IBTKQ9P2D0 1353 aaPredicted RBP11.96□□□□□ -0.49
PAAF1-206ENST00000535936 FZD9O00144 591 aa11.96□□□□□ -0.49
PAAF1-206ENST00000535936 ATMINO43313 823 aaPredicted RBP11.96□□□□□ -0.49
PAAF1-206ENST00000535936 MYL6BP14649 208 aa11.96□□□□□ -0.49
PAAF1-206ENST00000535936 ECE1P42892 770 aa11.96□□□□□ -0.49
PAAF1-206ENST00000535936 MAP2K1Q02750 393 aaPredicted RBP11.96□□□□□ -0.49
PAAF1-206ENST00000535936 DEFB115Q30KQ5 88 aa11.96□□□□□ -0.49
PAAF1-206ENST00000535936 DCAF8Q5TAQ9 597 aa11.96□□□□□ -0.49
PAAF1-206ENST00000535936 PRDM10Q9NQV6 1147 aa11.96□□□□□ -0.49
PAAF1-206ENST00000535936 BABAM1Q9NWV8 329 aa11.96□□□□□ -0.49
PAAF1-206ENST00000535936 TRPC6Q9Y210 931 aa11.96□□□□□ -0.49
PAAF1-206ENST00000535936 GJA3Q9Y6H8 435 aa11.96□□□□□ -0.49
PAAF1-206ENST00000535936 BCORQ6W2J9 1755 aa11.96□□□□□ -0.49
PAAF1-206ENST00000535936 SCN4AP35499 1836 aa11.95□□□□□ -0.5
PAAF1-206ENST00000535936 RNF123Q5XPI4 1314 aa11.95□□□□□ -0.5
PAAF1-206ENST00000535936 EIF4A1P60842 406 aaKnown RBP11.95□□□□□ -0.5
PAAF1-206ENST00000535936 HLFQ16534 295 aa11.95□□□□□ -0.5
PAAF1-206ENST00000535936 CNTROBQ8N137 903 aa11.95□□□□□ -0.5
PAAF1-206ENST00000535936 CRAMP1Q96RY5 1269 aa11.95□□□□□ -0.5
PAAF1-206ENST00000535936 MIS18AQ9NYP9 233 aa11.95□□□□□ -0.5
PAAF1-206ENST00000535936 TSPYL4Q9UJ04 414 aa11.95□□□□□ -0.5
PAAF1-206ENST00000535936 ABT1Q9ULW3 272 aaKnown RBP11.95□□□□□ -0.5
PAAF1-206ENST00000535936 SLX4Q8IY92 1834 aa11.95□□□□□ -0.5
PAAF1-206ENST00000535936 PASKQ96RG2 1323 aa11.94□□□□□ -0.5
PAAF1-206ENST00000535936 PPEF1O14829 653 aaPredicted RBP11.94□□□□□ -0.5
PAAF1-206ENST00000535936 GPTP24298 496 aa11.94□□□□□ -0.5
PAAF1-206ENST00000535936 CRY2Q49AN0 593 aa11.94□□□□□ -0.5
PAAF1-206ENST00000535936 GIGYF2Q6Y7W6 1299 aaKnown RBP11.94□□□□□ -0.5
PAAF1-206ENST00000535936 PAXIP1Q6ZW49 1069 aaPredicted RBP11.94□□□□□ -0.5
PAAF1-206ENST00000535936 NUTM1Q86Y26 1132 aa11.94□□□□□ -0.5
PAAF1-206ENST00000535936 UTP14AQ9BVJ6 771 aaKnown RBP11.94□□□□□ -0.5
PAAF1-206ENST00000535936 ZBTB3Q9H5J0 574 aa11.94□□□□□ -0.5
PAAF1-206ENST00000535936 ARFGEF2Q9Y6D5 1785 aa11.94□□□□□ -0.5
PAAF1-206ENST00000535936 COL11A2P13942 1736 aaPredicted RBP11.94□□□□□ -0.5
PAAF1-206ENST00000535936 ZNF541Q9H0D2 1346 aa11.93□□□□□ -0.5
PAAF1-206ENST00000535936 PPIP5K2O43314 1243 aa11.93□□□□□ -0.5
PAAF1-206ENST00000535936 HOXA10P31260 410 aaPredicted RBP11.93□□□□□ -0.5
PAAF1-206ENST00000535936 USP50Q70EL3 339 aaPredicted RBP11.93□□□□□ -0.5
PAAF1-206ENST00000535936 RIC1Q4ADV7 1423 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms