RNA–Protein interactions for RNA: ENST00000535900.5

UBE3B-205, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-205ENST00000535900 PTPRCP08575 1304 aa13.72□□□□□ -0.21
UBE3B-205ENST00000535900 NFKBIEO00221 500 aa13.72□□□□□ -0.21
UBE3B-205ENST00000535900 BCAR3O75815 825 aa13.72□□□□□ -0.21
UBE3B-205ENST00000535900 ZKSCAN2Q63HK3 967 aa13.72□□□□□ -0.21
UBE3B-205ENST00000535900 MRPL50Q8N5N7 158 aaKnown RBP13.72□□□□□ -0.21
UBE3B-205ENST00000535900 RRAGCQ9HB90 399 aa13.72□□□□□ -0.21
UBE3B-205ENST00000535900 DICER1Q9UPY3 1922 aaKnown RBP13.71□□□□□ -0.21
UBE3B-205ENST00000535900 C21orf2O43822 256 aa13.71□□□□□ -0.21
UBE3B-205ENST00000535900 FSTL1Q12841 308 aa13.71□□□□□ -0.21
UBE3B-205ENST00000535900 NBPF5PQ86XG9 351 aaPredicted RBP13.71□□□□□ -0.21
UBE3B-205ENST00000535900 HYPKQ9NX55 129 aa13.71□□□□□ -0.21
UBE3B-205ENST00000535900 SLC4A2P04920 1241 aa13.7□□□□□ -0.22
UBE3B-205ENST00000535900 CNKSR1Q969H4 720 aa13.7□□□□□ -0.22
UBE3B-205ENST00000535900 API5Q9BZZ5 524 aaKnown RBP13.7□□□□□ -0.22
UBE3B-205ENST00000535900 DDX21Q9NR30 783 aaKnown RBP eCLIP13.7□□□□□ -0.22
UBE3B-205ENST00000535900 SLX4Q8IY92 1834 aa13.69□□□□□ -0.22
UBE3B-205ENST00000535900 GLTPD2A6NH11 291 aa13.69□□□□□ -0.22
UBE3B-205ENST00000535900 EIF2S2P20042 333 aaKnown RBP13.69□□□□□ -0.22
UBE3B-205ENST00000535900 PRELPP51888 382 aa13.69□□□□□ -0.22
UBE3B-205ENST00000535900 PRPF40BQ6NWY9 871 aaKnown RBP13.69□□□□□ -0.22
UBE3B-205ENST00000535900 ATF7IPQ6VMQ6 1270 aa13.69□□□□□ -0.22
UBE3B-205ENST00000535900 SMC1BQ8NDV3 1235 aa13.69□□□□□ -0.22
UBE3B-205ENST00000535900 TAOK3Q9H2K8 898 aa13.69□□□□□ -0.22
UBE3B-205ENST00000535900 AAMPQ13685 434 aa13.68□□□□□ -0.22
UBE3B-205ENST00000535900 SOGA3Q5TF21 947 aa13.68□□□□□ -0.22
UBE3B-205ENST00000535900 STYK1Q6J9G0 422 aa13.68□□□□□ -0.22
UBE3B-205ENST00000535900 CLEC4GQ6UXB4 293 aa13.68□□□□□ -0.22
UBE3B-205ENST00000535900 MASTLQ96GX5 879 aa13.68□□□□□ -0.22
UBE3B-205ENST00000535900 BCL2L13Q9BXK5 485 aa13.68□□□□□ -0.22
UBE3B-205ENST00000535900 NOB1Q9ULX3 412 aaKnown RBP13.68□□□□□ -0.22
UBE3B-205ENST00000535900 NIP7Q9Y221 180 aaKnown RBP eCLIP13.68□□□□□ -0.22
UBE3B-205ENST00000535900 FAM177BA6PVY3 158 aa13.67□□□□□ -0.22
UBE3B-205ENST00000535900 NBPF26B4DH59 902 aa13.67□□□□□ -0.22
UBE3B-205ENST00000535900 SRGNP10124 158 aa13.67□□□□□ -0.22
UBE3B-205ENST00000535900 VEGFAP15692 232 aaPredicted RBP13.67□□□□□ -0.22
UBE3B-205ENST00000535900 ERFEQ4G0M1 354 aa13.67□□□□□ -0.22
UBE3B-205ENST00000535900 NBPF10Q6P3W6 841 aaKnown RBP13.67□□□□□ -0.22
UBE3B-205ENST00000535900 NBPF15Q8N660 670 aa13.67□□□□□ -0.22
UBE3B-205ENST00000535900 FRAT1Q92837 279 aaPredicted RBP13.67□□□□□ -0.22
UBE3B-205ENST00000535900 CHMP4BQ9H444 224 aaKnown RBP13.67□□□□□ -0.22
UBE3B-205ENST00000535900 LTBP3Q9NS15 1303 aa13.66□□□□□ -0.22
UBE3B-205ENST00000535900 DDX58O95786 925 aaKnown RBP13.66□□□□□ -0.22
UBE3B-205ENST00000535900 HTRA3P83110 453 aa13.66□□□□□ -0.22
UBE3B-205ENST00000535900 FLIIQ13045 1269 aa13.66□□□□□ -0.22
UBE3B-205ENST00000535900 DPY19L2Q6NUT2 758 aa13.66□□□□□ -0.22
UBE3B-205ENST00000535900 FTSJ3Q8IY81 847 aaKnown RBP13.66□□□□□ -0.22
UBE3B-205ENST00000535900 DZIP1LQ8IYY4 767 aaKnown RBP13.66□□□□□ -0.22
UBE3B-205ENST00000535900 CHPF2Q9P2E5 772 aa13.66□□□□□ -0.22
UBE3B-205ENST00000535900 RGL2O15211 777 aa13.65□□□□□ -0.22
UBE3B-205ENST00000535900 TRIM27P14373 513 aa13.65□□□□□ -0.22
UBE3B-205ENST00000535900 GTF2E1P29083 439 aaPredicted RBP13.65□□□□□ -0.22
UBE3B-205ENST00000535900 PDIA6Q15084 440 aa13.65□□□□□ -0.22
UBE3B-205ENST00000535900 CCDC93Q567U6 631 aa13.65□□□□□ -0.22
UBE3B-205ENST00000535900 TPTE2Q6XPS3 522 aa13.65□□□□□ -0.22
UBE3B-205ENST00000535900 KIF6Q6ZMV9 814 aa13.65□□□□□ -0.22
UBE3B-205ENST00000535900 NUP98P52948 1817 aa13.64□□□□□ -0.23
UBE3B-205ENST00000535900 PLIN1O60240 522 aa13.64□□□□□ -0.23
UBE3B-205ENST00000535900 NPR1P16066 1061 aa13.64□□□□□ -0.23
UBE3B-205ENST00000535900 ABCC4O15439 1325 aa13.64□□□□□ -0.23
UBE3B-205ENST00000535900 ABCC12Q96J65 1359 aa13.63□□□□□ -0.23
UBE3B-205ENST00000535900 FKBP5Q13451 457 aaPredicted RBP13.63□□□□□ -0.23
UBE3B-205ENST00000535900 HLFQ16534 295 aa13.63□□□□□ -0.23
UBE3B-205ENST00000535900 DNAJC5GQ8N7S2 189 aa13.63□□□□□ -0.23
UBE3B-205ENST00000535900 NECTIN2Q92692 538 aa13.63□□□□□ -0.23
UBE3B-205ENST00000535900 KLRG1Q96E93 195 aa13.63□□□□□ -0.23
UBE3B-205ENST00000535900 IBTKQ9P2D0 1353 aaPredicted RBP13.62□□□□□ -0.23
UBE3B-205ENST00000535900 TCERG1O14776 1098 aaKnown RBP13.62□□□□□ -0.23
UBE3B-205ENST00000535900 MYL6BP14649 208 aa13.62□□□□□ -0.23
UBE3B-205ENST00000535900 CCT4P50991 539 aaKnown RBP13.62□□□□□ -0.23
UBE3B-205ENST00000535900 LRP10Q7Z4F1 713 aa13.62□□□□□ -0.23
UBE3B-205ENST00000535900 NYXQ9GZU5 481 aa13.62□□□□□ -0.23
UBE3B-205ENST00000535900 PPP4R2Q9NY27 417 aa13.62□□□□□ -0.23
UBE3B-205ENST00000535900 MAP3K15Q6ZN16 1313 aa13.62□□□□□ -0.23
UBE3B-205ENST00000535900 MVPQ14764 893 aaKnown RBP13.61□□□□□ -0.23
UBE3B-205ENST00000535900 INTS3Q68E01 1043 aaKnown RBP13.61□□□□□ -0.23
UBE3B-205ENST00000535900 KSR2Q6VAB6 950 aa13.61□□□□□ -0.23
UBE3B-205ENST00000535900 ZBTB3Q9H5J0 574 aa13.61□□□□□ -0.23
UBE3B-205ENST00000535900 DDX19BQ9UMR2 479 aa13.61□□□□□ -0.23
UBE3B-205ENST00000535900 RIC1Q4ADV7 1423 aa13.61□□□□□ -0.23
UBE3B-205ENST00000535900 ANKRD36CQ5JPF3 1778 aa13.6□□□□□ -0.23
UBE3B-205ENST00000535900 ERVV-1B6SEH8 477 aa13.6□□□□□ -0.23
UBE3B-205ENST00000535900 GPTP24298 496 aa13.6□□□□□ -0.23
UBE3B-205ENST00000535900 FKBP4Q02790 459 aaKnown RBP eCLIP13.6□□□□□ -0.23
UBE3B-205ENST00000535900 PROSER3Q2NL68 480 aa13.6□□□□□ -0.23
UBE3B-205ENST00000535900 G2E3Q7L622 706 aa13.6□□□□□ -0.23
UBE3B-205ENST00000535900 NUTM1Q86Y26 1132 aa13.6□□□□□ -0.23
UBE3B-205ENST00000535900 PHAXQ9H814 394 aaKnown RBP13.6□□□□□ -0.23
UBE3B-205ENST00000535900 SCN4AP35499 1836 aa13.6□□□□□ -0.23
UBE3B-205ENST00000535900 KLRG2A4D1S0 409 aaPredicted RBP13.59□□□□□ -0.23
UBE3B-205ENST00000535900 DDNO94850 711 aaPredicted RBP13.59□□□□□ -0.23
UBE3B-205ENST00000535900 ALDH1B1P30837 517 aa13.59□□□□□ -0.23
UBE3B-205ENST00000535900 TTLL7Q6ZT98 887 aa13.59□□□□□ -0.23
UBE3B-205ENST00000535900 ANKRD13DQ6ZTN6 518 aa13.59□□□□□ -0.23
UBE3B-205ENST00000535900 COPS6Q7L5N1 327 aa13.59□□□□□ -0.23
UBE3B-205ENST00000535900 PLBD2Q8NHP8 589 aa13.59□□□□□ -0.23
UBE3B-205ENST00000535900 XAGE3Q8WTP9 111 aa13.59□□□□□ -0.23
UBE3B-205ENST00000535900 DNAAF4Q8WXU2 420 aa13.59□□□□□ -0.23
UBE3B-205ENST00000535900 RPGRQ92834 1020 aaKnown RBP13.59□□□□□ -0.23
UBE3B-205ENST00000535900 PI4KAP2A4QPH2 592 aa13.58□□□□□ -0.24
UBE3B-205ENST00000535900 IQCA1LA6NCM1 817 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms